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| Field | Value |
|---|---|
| Gene ID | Lj6g3v0819000 |
| Transcript ID | Lj6g3v0819000.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Bactericidal permeability-increasing protein [Medicago truncatula] gi|357494733|ref|XP_003617655.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 444 | 444 | 1.90E-174 | – | |
| SignalP | 1 | 19 | 19 | – | – | |
| Phobius | 1 | 19 | 19 | – | – | |
| Phobius | 1 | 3 | 3 | – | – | |
| PANTHER | 1 | 444 | 444 | 1.90E-174 | ||
| Phobius | 4 | 15 | 12 | – | – | |
| PIRSF | 4 | 444 | 441 | 1.40E-116 | ||
| Phobius | 16 | 19 | 4 | – | – | |
| Phobius | 20 | 444 | 425 | – | – | |
| SUPERFAMILY | 33 | 242 | 210 | 6.02E-34 | ||
| SMART | 33 | 258 | 226 | 0.0036 | ||
| Gene3D | 36 | 212 | 177 | 1.90E-32 | – | |
| Pfam | 37 | 209 | 173 | 4.50E-19 | ||
| Gene3D | 213 | 441 | 229 | 4.90E-59 | – | |
| SUPERFAMILY | 247 | 442 | 196 | 2.22E-30 | ||
| SMART | 276 | 444 | 169 | 3.00E-05 | ||
| Pfam | 280 | 443 | 164 | 7.40E-25 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Extracellular space | That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid. | ||
| Molecular function | Lipid binding | Interacting selectively and non-covalently with a lipid. |
Expression pattern of Lj6g3v0819000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v0819000.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.