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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001126
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 11 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.386s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0359589.1
n.a. PREDICTED: DNA repair protein REV1-like isoform X2 [Cicer arietinum] gi|502158837|ref|XP_004511297.1| chr0 189299157 189307621 +
3 domain predictions
1 GO term
Lj1g3v0049850.1
n.a. PREDICTED: DNA repair protein REV1-like isoform X2 [Cicer arietinum] gi|502158837|ref|XP_004511297.1| chr1 244558 260965 +
3 domain predictions
1 GO term
Lj1g3v0052100.1
n.a. PREDICTED: DNA polymerase kappa-like [Cicer arietinum] gi|502158892|ref|XP_004511315.1| chr1 323868 325081 -
3 domain predictions
1 GO term
Lj4g3v0451050.1
n.a. PREDICTED: DNA polymerase eta-like isoform X3 [Cicer arietinum] gi|502141797|ref|XP_004504643.1| chr4 6567550 6573184 +
3 domain predictions
1 GO term
Lj4g3v0451050.2
n.a. PREDICTED: DNA polymerase eta-like isoform X3 [Cicer arietinum] gi|502141797|ref|XP_004504643.1| chr4 6567550 6572201 +
3 domain predictions
1 GO term
Lj4g3v0451050.3
n.a. PREDICTED: DNA polymerase eta-like isoform X3 [Cicer arietinum] gi|502141797|ref|XP_004504643.1| chr4 6567550 6572885 +
3 domain predictions
1 GO term
LotjaGi2g1v0459700.1
n.a. DNA polymerase IV; TAIR: AT1G49980.1 DNA/RNA polymerases superfamily protein; Swiss-Prot: sp|P34409|POLK_CAEEL DNA polymerase kappa; TrEMBL-Plants: tr|I1LFP9|I1LFP9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0459700 LjG1.1_chr2 95342682 95353364 +
3 domain predictions
1 GO term
LotjaGi2g1v0461300.1
n.a. DNA polymerase IV; TAIR: AT5G44750.1 DNA-directed DNA polymerase; Swiss-Prot: sp|A3EWL3|REV1_ARATH DNA repair protein REV1; TrEMBL-Plants: tr|A0A0R0LQ66|A0A0R0LQ66_SOYBN DNA repair protein REV1; Found in the gene: LotjaGi2g1v0461300 LjG1.1_chr2 95437511 95456871 +
3 domain predictions
1 GO term
LotjaGi2g1v0461300.2
n.a. DNA polymerase IV; TAIR: AT5G44750.1 DNA-directed DNA polymerase; Swiss-Prot: sp|A3EWL3|REV1_ARATH DNA repair protein REV1; TrEMBL-Plants: tr|A0A0R0LQ66|A0A0R0LQ66_SOYBN DNA repair protein REV1; Found in the gene: LotjaGi2g1v0461300 LjG1.1_chr2 95437558 95455220 +
3 domain predictions
1 GO term
LotjaGi2g1v0461300.3
n.a. DNA polymerase IV; TAIR: AT5G44750.1 DNA-directed DNA polymerase; Swiss-Prot: sp|A3EWL3|REV1_ARATH DNA repair protein REV1; TrEMBL-Plants: tr|A0A0R0LQ66|A0A0R0LQ66_SOYBN DNA repair protein REV1; Found in the gene: LotjaGi2g1v0461300 LjG1.1_chr2 95437598 95456661 +
3 domain predictions
1 GO term
LotjaGi4g1v0055000.1
n.a. DNA polymerase IV; TAIR: AT5G44740.2 Y-family DNA polymerase H; Swiss-Prot: sp|Q8H2D5|POLH_ARATH DNA polymerase eta; TrEMBL-Plants: tr|I1KRK8|I1KRK8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0055000 LjG1.1_chr4 6643505 6649579 +
3 domain predictions
1 GO term