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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001173
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We have found 22 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.021s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v3233410.1
n.a. PREDICTED: dolichyl-phosphate beta-glucosyltransferase-like [Cicer arietinum] gi|502102669|ref|XP_004492149.1| chr1 36635983 36643769 -
2 domain predictions
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Lj3g3v1132300.1
n.a. PREDICTED: glucomannan 4-beta-mannosyltransferase 2-like [Cicer arietinum] gi|502145679|ref|XP_004506130.1| chr3 15272663 15278420 +
2 domain predictions
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Lj3g3v3006570.1
n.a. PREDICTED: glucomannan 4-beta-mannosyltransferase 2-like [Cicer arietinum] gi|502145679|ref|XP_004506130.1| chr3 37656100 37661857 -
2 domain predictions
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Lj4g3v0496560.1
n.a. PREDICTED: dolichol-phosphate mannosyltransferase-like [Glycine max] gi|356521438|ref|XP_003529363.1| chr4 8335523 8338542 -
2 domain predictions
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Lj5g3v0707740.1
n.a. PREDICTED: glucomannan 4-beta-mannosyltransferase 9-like [Glycine max] gi|356533467|ref|XP_003535285.1| chr5 10361119 10362761 +
2 domain predictions
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Lj5g3v0707750.1
n.a. PREDICTED: glucomannan 4-beta-mannosyltransferase 9-like [Glycine max] gi|356505314|ref|XP_003521436.1| chr5 10363928 10366793 +
2 domain predictions
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LotjaGi1g1v0395900.1
n.a. Cellulose synthase-like protein; TAIR: AT4G31590.1 Cellulose-synthase-like C5; Swiss-Prot: sp|Q9SB75|CSLC5_ARATH Probable xyloglucan glycosyltransferase 5; TrEMBL-Plants: tr|V7AU54|V7AU54_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0395900 LjG1.1_chr1 88214924 88224569 -
2 domain predictions
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LotjaGi1g1v0543500.1
n.a. Dolichyl-phosphate beta-glucosyltransferase; TAIR: AT2G39630.1 Nucleotide-diphospho-sugar transferases superfamily protein; Swiss-Prot: sp|Q9Y673|ALG5_HUMAN Dolichyl-phosphate beta-glucosyltransferase; TrEMBL-Plants: tr|A0A1J7H3R0|A0A1J7H3R0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0543500 LjG1.1_chr1 107309383 107316293 -
2 domain predictions
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LotjaGi2g1v0156800.2
n.a. Cellulose synthase-like protein; TAIR: AT5G03760.1 Nucleotide-diphospho-sugar transferases superfamily protein; Swiss-Prot: sp|Q9LZR3|CSLA9_ARATH Glucomannan 4-beta-mannosyltransferase 9; TrEMBL-Plants: tr|I1NHP1|I1NHP1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0156800 LjG1.1_chr2 55604269 55608250 -
2 domain predictions
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LotjaGi2g1v0156800.3
n.a. Cellulose synthase-like protein; TAIR: AT5G03760.1 Nucleotide-diphospho-sugar transferases superfamily protein; Swiss-Prot: sp|Q9LZR3|CSLA9_ARATH Glucomannan 4-beta-mannosyltransferase 9; TrEMBL-Plants: tr|I1NHP1|I1NHP1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0156800 LjG1.1_chr2 55604269 55608265 -
3 domain predictions
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LotjaGi3g1v0089600.1
n.a. Cellulose synthase-like protein; TAIR: AT3G07330.1 Cellulose-synthase-like C6; Swiss-Prot: sp|Q9SRT3|CSLC6_ARATH Probable xyloglucan glycosyltransferase 6; TrEMBL-Plants: tr|A0A1J7HXQ7|A0A1J7HXQ7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0089600 LjG1.1_chr3 10118268 10126106 -
2 domain predictions
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LotjaGi3g1v0089600.2
n.a. Cellulose synthase-like protein; TAIR: AT3G07330.1 Cellulose-synthase-like C6; Swiss-Prot: sp|Q9SRT3|CSLC6_ARATH Probable xyloglucan glycosyltransferase 6; TrEMBL-Plants: tr|A0A1J7HXQ7|A0A1J7HXQ7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0089600 LjG1.1_chr3 10120147 10124258 -
2 domain predictions
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LotjaGi3g1v0089600.3
n.a. Cellulose synthase-like protein; TAIR: AT3G07330.1 Cellulose-synthase-like C6; Swiss-Prot: sp|Q9SRT3|CSLC6_ARATH Probable xyloglucan glycosyltransferase 6; TrEMBL-Plants: tr|A0A1J7HXQ7|A0A1J7HXQ7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0089600 LjG1.1_chr3 10120147 10125724 -
2 domain predictions
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LotjaGi3g1v0343600.1
n.a. Cellulose synthase-like protein; TAIR: AT4G31590.1 Cellulose-synthase-like C5; Swiss-Prot: sp|Q9SB75|CSLC5_ARATH Probable xyloglucan glycosyltransferase 5; TrEMBL-Plants: tr|I1KG54|I1KG54_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0343600 LjG1.1_chr3 72023768 72027774 +
2 domain predictions
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LotjaGi3g1v0343600.2
n.a. Cellulose synthase-like protein; TAIR: AT2G24630.1 Glycosyl transferase family 2 protein; Swiss-Prot: sp|Q69L19|CSLC2_ORYSJ Probable xyloglucan glycosyltransferase 2; TrEMBL-Plants: tr|A0A0B2S4W1|A0A0B2S4W1_GLYSO Putative xyloglucan glycosyltransferase 8; Found in the gene: LotjaGi3g1v0343600 LjG1.1_chr3 72025223 72027593 +
2 domain predictions
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LotjaGi3g1v0481100.1
n.a. Cellulose synthase-like protein; TAIR: AT5G22740.1 cellulose synthase-like A02; Swiss-Prot: sp|Q9FNI7|CSLA2_ARATH Glucomannan 4-beta-mannosyltransferase 2; TrEMBL-Plants: tr|G7JM38|G7JM38_MEDTR Cellulose synthase-like protein A1; Found in the gene: LotjaGi3g1v0481100 LjG1.1_chr3 89843956 89850365 -
2 domain predictions
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LotjaGi3g1v0481100.2
n.a. Cellulose synthase-like protein; TAIR: AT5G22740.1 cellulose synthase-like A02; Swiss-Prot: sp|Q9FNI7|CSLA2_ARATH Glucomannan 4-beta-mannosyltransferase 2; TrEMBL-Plants: tr|I1LKW4|I1LKW4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0481100 LjG1.1_chr3 89844735 89849900 -
2 domain predictions
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LotjaGi4g1v0065700.1
n.a. Dolichol-phosphate mannosyltransferase; TAIR: AT1G20575.1 Nucleotide-diphospho-sugar transferases superfamily protein; Swiss-Prot: sp|O60762|DPM1_HUMAN Dolichol-phosphate mannosyltransferase subunit 1; TrEMBL-Plants: tr|I3S1J1|I3S1J1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0065700 LjG1.1_chr4 8184315 8187989 -
2 domain predictions
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LotjaGi4g1v0065700.2
n.a. Dolichol-phosphate mannosyltransferase; TAIR: AT1G20575.1 Nucleotide-diphospho-sugar transferases superfamily protein; Swiss-Prot: sp|O60762|DPM1_HUMAN Dolichol-phosphate mannosyltransferase subunit 1; TrEMBL-Plants: tr|I3S1J1|I3S1J1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0065700 LjG1.1_chr4 8184933 8187328 -
2 domain predictions
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LotjaGi4g1v0065700.3
n.a. Dolichol-phosphate mannosyltransferase; TAIR: AT1G20575.1 Nucleotide-diphospho-sugar transferases superfamily protein; Swiss-Prot: sp|O60762|DPM1_HUMAN Dolichol-phosphate mannosyltransferase subunit 1; TrEMBL-Plants: tr|I3S1J1|I3S1J1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0065700 LjG1.1_chr4 8184933 8187371 -
2 domain predictions
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LotjaGi5g1v0036900.1
n.a. Cellulose synthase-like protein; TAIR: AT4G07960.1 Cellulose-synthase-like C12; Swiss-Prot: sp|Q9ZQB9|CSLCC_ARATH Probable xyloglucan glycosyltransferase 12; TrEMBL-Plants: tr|A0A059BRM9|A0A059BRM9_EUCGR Uncharacterized protein; Found in the gene: LotjaGi5g1v0036900 LjG1.1_chr5 6102566 6107335 -
2 domain predictions
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LotjaGi5g1v0090600.3
n.a. Cellulose synthase-like protein; TAIR: AT5G03760.1 Nucleotide-diphospho-sugar transferases superfamily protein; Swiss-Prot: sp|Q9LZR3|CSLA9_ARATH Glucomannan 4-beta-mannosyltransferase 9; TrEMBL-Plants: tr|I1NAI2|I1NAI2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0090600 LjG1.1_chr5 15769218 15774255 +
2 domain predictions
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