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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001214
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 155 results. Now displaying 1 of 4 with 50 rows per page. This search has taken 6.246s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0007239.1
n.a. PREDICTED: probable histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9-like [Cicer arietinum] gi|502154147|ref|XP_004509600.1| chr0 2811159 2819313 -
4 domain predictions
1 GO term
Lj0g3v0062699.1
n.a. PREDICTED: histone-lysine N-methyltransferase ATX4-like [Glycine max] gi|356518627|ref|XP_003527980.1| chr0 21108503 21118988 -
4 domain predictions
1 GO term
Lj0g3v0102529.1
n.a. PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like [Glycine max] gi|356497095|ref|XP_003517399.1| chr0 43660245 43661570 +
4 domain predictions
1 GO term
Lj0g3v0111689.1
n.a. PREDICTED: protein SET DOMAIN GROUP 41-like [Glycine max] gi|356561422|ref|XP_003548980.1| chr0 48531287 48534044 -
2 domain predictions
1 GO term
Lj0g3v0128679.1
n.a. PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1-like [Glycine max] gi|356508242|ref|XP_003522868.1| chr0 58166236 58169952 +
4 domain predictions
1 GO term
Lj0g3v0132279.2
n.a. PREDICTED: ribosomal N-lysine methyltransferase 3-like [Cicer arietinum] gi|502116507|ref|XP_004495465.1| chr0 60343113 60348034 +
3 domain predictions
1 GO term
Lj0g3v0172449.1
n.a. PREDICTED: histone-lysine N-methyltransferase SUVR3-like [Glycine max] gi|356574501|ref|XP_003555385.1| chr0 82853035 82858979 -
4 domain predictions
1 GO term
Lj0g3v0213049.1
n.a. PREDICTED: histone-lysine N-methyltransferase EZA1-like [Glycine max] gi|356501867|ref|XP_003519745.1| chr0 107517024 107521993 +
4 domain predictions
1 GO term
Lj0g3v0223599.1
n.a. PREDICTED: histone-lysine N-methyltransferase SUVR4-like [Glycine max] gi|356533657|ref|XP_003535377.1| chr0 115335715 115348025 -
4 domain predictions
1 GO term
Lj0g3v0223599.2
n.a. PREDICTED: histone-lysine N-methyltransferase SUVR4-like [Glycine max] gi|356533657|ref|XP_003535377.1| chr0 115335715 115344565 -
3 domain predictions
1 GO term
Lj0g3v0223599.4
n.a. PREDICTED: histone-lysine N-methyltransferase SUVR2-like [Glycine max] gi|356574896|ref|XP_003555579.1| chr0 115335715 115342975 -
4 domain predictions
1 GO term
Lj0g3v0241779.1
n.a. ASH1-like protein [Phaseolus vulgaris] gi|342209884|gb|AEL16989.1| chr0 125480301 125486508 -
4 domain predictions
1 GO term
Lj0g3v0251739.1
n.a. SET domain protein [Medicago truncatula] gi|357474929|ref|XP_003607750.1| chr0 130565297 130567433 -
4 domain predictions
1 GO term
Lj0g3v0252639.1
n.a. PREDICTED: histone-lysine N-methyltransferase ATXR4-like [Cicer arietinum] gi|502167491|ref|XP_004514157.1| chr0 131044817 131048571 -
3 domain predictions
1 GO term
Lj0g3v0252639.2
n.a. PREDICTED: histone-lysine N-methyltransferase ATXR4-like [Cicer arietinum] gi|502167491|ref|XP_004514157.1| chr0 131044817 131048571 -
4 domain predictions
1 GO term
Lj0g3v0265609.1
n.a. Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Medicago truncatula] gi|357505017|ref|XP_003622797.1| chr0 137616300 137624390 +
4 domain predictions
1 GO term
Lj0g3v0266169.1
n.a. PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1-like [Glycine max] gi|356546288|ref|XP_003541561.1| chr0 137822125 137828672 +
4 domain predictions
1 GO term
Lj0g3v0269559.1
n.a. PREDICTED: probable histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9-like [Cicer arietinum] gi|502154147|ref|XP_004509600.1| chr0 139649442 139651574 -
4 domain predictions
1 GO term
Lj0g3v0293009.1
n.a. PREDICTED: probable histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9-like isoform X1 [Cicer arietinum] gi|502123658|ref|XP_004498209.1| chr0 152088549 152092608 +
4 domain predictions
1 GO term
Lj0g3v0308279.1
n.a. PREDICTED: histone-lysine N-methyltransferase ATX2-like [Glycine max] gi|356526623|ref|XP_003531916.1| chr0 160950568 160957248 +
4 domain predictions
1 GO term
Lj0g3v0309989.1
n.a. PREDICTED: histone-lysine N-methyltransferase SUVR5-like [Glycine max] gi|356561269|ref|XP_003548905.1| chr0 161816987 161826481 -
4 domain predictions
1 GO term
Lj0g3v0325949.1
n.a. PREDICTED: histone-lysine N-methyltransferase SUVR1-like [Glycine max] gi|356536852|ref|XP_003536947.1| chr0 170351302 170359067 +
4 domain predictions
1 GO term
Lj1g3v0764540.1
n.a. PREDICTED: histone-lysine N-methyltransferase ASHR1-like isoform X2 [Cicer arietinum] gi|502130281|ref|XP_004500596.1| chr1 9928583 9940744 +
3 domain predictions
1 GO term
Lj1g3v0764540.2
n.a. PREDICTED: histone-lysine N-methyltransferase ASHR1-like isoform X1 [Cicer arietinum] gi|502130279|ref|XP_004500595.1| chr1 9928583 9940744 +
4 domain predictions
1 GO term
Lj1g3v0887590.1
n.a. PREDICTED: histone-lysine N-methyltransferase ASHH2-like [Glycine max] gi|356507632|ref|XP_003522568.1| chr1 11315183 11328722 +
4 domain predictions
1 GO term
Lj1g3v0887590.2
n.a. PREDICTED: histone-lysine N-methyltransferase ASHH2-like [Glycine max] gi|356507632|ref|XP_003522568.1| chr1 11316000 11328722 +
4 domain predictions
1 GO term
Lj1g3v1092730.1
n.a. SET and MYND domain-containing protein [Medicago truncatula] gi|357464329|ref|XP_003602446.1| chr1 13841994 13855383 +
3 domain predictions
1 GO term
Lj1g3v1300630.2
n.a. PREDICTED: histone-lysine N-methyltransferase ATXR5-like [Cicer arietinum] gi|502136971|ref|XP_004502916.1| chr1 15562801 15564498 -
3 domain predictions
1 GO term
Lj1g3v2624870.1
n.a. Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase [Medicago truncatula] gi|357507175|ref|XP_003623876.1| chr1 30428319 30436098 -
3 domain predictions
1 GO term
Lj1g3v2624870.2
n.a. Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase [Medicago truncatula] gi|357507175|ref|XP_003623876.1| chr1 30428319 30436098 -
2 domain predictions
1 GO term
Lj1g3v3832560.2
n.a. PREDICTED: histone-lysine N-methyltransferase ATXR6-like [Glycine max] gi|356568947|ref|XP_003552669.1| chr1 43399731 43401519 +
3 domain predictions
1 GO term
Lj1g3v3904410.1
n.a. PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like [Glycine max] gi|356560426|ref|XP_003548493.1| chr1 45483181 45490448 -
4 domain predictions
1 GO term
Lj1g3v4059050.1
n.a. PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1-like [Glycine max] gi|356504621|ref|XP_003521094.1| chr1 48012042 48015981 +
4 domain predictions
1 GO term
Lj1g3v4516130.1
n.a. PREDICTED: histone-lysine N-methyltransferase SUVR4-like isoform X1 [Cicer arietinum] gi|502110178|ref|XP_004493818.1| chr1 53212741 53221564 -
4 domain predictions
1 GO term
Lj1g3v5034780.1
n.a. PREDICTED: histone-lysine N-methyltransferase ATX3-like [Cicer arietinum] gi|502113957|ref|XP_004494815.1| chr1 61526566 61539647 -
4 domain predictions
1 GO term
Lj2g3v0523280.1
n.a. PREDICTED: histone-lysine N-methyltransferase ASHH3-like [Glycine max] gi|356530969|ref|XP_003534051.1| chr2 6971562 6982866 +
4 domain predictions
1 GO term
Lj2g3v1828500.1
n.a. PREDICTED: histone-lysine N-methyltransferase SUVR5-like [Glycine max] gi|356540712|ref|XP_003538829.1| chr2 27479378 27489366 -
4 domain predictions
1 GO term
Lj2g3v1890940.1
n.a. PREDICTED: histone-lysine N-methyltransferase CLF-like [Glycine max] gi|356540672|ref|XP_003538810.1| chr2 28108109 28115555 -
4 domain predictions
1 GO term
Lj2g3v1890940.2
n.a. PREDICTED: histone-lysine N-methyltransferase CLF-like [Glycine max] gi|356540672|ref|XP_003538810.1| chr2 28108109 28116261 -
4 domain predictions
1 GO term
Lj2g3v1989010.1
n.a. PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like [Cicer arietinum] gi|502160414|ref|XP_004511737.1| chr2 29682391 29694387 -
4 domain predictions
1 GO term
Lj2g3v2507850.1
n.a. PREDICTED: protein SET DOMAIN GROUP 40-like [Cicer arietinum] gi|502096540|ref|XP_004490774.1| chr2 34841886 34845451 -
3 domain predictions
1 GO term
Lj2g3v2985910.1
n.a. PREDICTED: probable histone-lysine N-methyltransferase ATXR3-like isoform X1 [Cicer arietinum] gi|502083114|ref|XP_004487363.1| chr2 38494936 38513224 -
4 domain predictions
1 GO term
Lj2g3v2985910.2
n.a. PREDICTED: probable histone-lysine N-methyltransferase ATXR3-like isoform X1 [Cicer arietinum] gi|502083114|ref|XP_004487363.1| chr2 38494936 38513224 -
4 domain predictions
1 GO term
Lj2g3v2985910.3
n.a. PREDICTED: probable histone-lysine N-methyltransferase ATXR3-like isoform X1 [Cicer arietinum] gi|502083114|ref|XP_004487363.1| chr2 38494936 38513224 -
4 domain predictions
1 GO term
Lj3g3v0075610.1
n.a. PREDICTED: histone-lysine N-methyltransferase SUVR5-like [Glycine max] gi|356561269|ref|XP_003548905.1| chr3 684782 697632 -
4 domain predictions
1 GO term
Lj3g3v0075610.2
n.a. PREDICTED: histone-lysine N-methyltransferase SUVR5-like [Glycine max] gi|356561269|ref|XP_003548905.1| chr3 684782 691553 -
4 domain predictions
1 GO term
Lj3g3v0966690.1
n.a. PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5-like [Glycine max] gi|356577497|ref|XP_003556861.1| chr3 13223810 13224181 +
2 domain predictions
1 GO term
Lj3g3v2441840.1
n.a. PREDICTED: histone-lysine N-methyltransferase ATX3-like [Glycine max] gi|356522510|ref|XP_003529889.1| chr3 30108466 30117187 -
4 domain predictions
1 GO term
Lj3g3v2441840.2
n.a. PREDICTED: histone-lysine N-methyltransferase ATX3-like [Glycine max] gi|356522510|ref|XP_003529889.1| chr3 30108466 30118179 -
4 domain predictions
1 GO term
Lj3g3v2888370.1
n.a. PREDICTED: probable histone-lysine N-methyltransferase ATXR3-like [Cicer arietinum] gi|502165361|ref|XP_004513544.1| chr3 35740235 35756259 -
4 domain predictions
1 GO term