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Lj2g3v2985910.1

Overview

Field Value
Gene ID Lj2g3v2985910
Transcript ID Lj2g3v2985910.1
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable histone-lysine N-methyltransferase ATXR3-like isoform X1 [Cicer arietinum] gi|502083114|ref|XP_004487363.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite 1 293 293
PANTHER 1 14 14 5.80E-68
PANTHER 1 14 14 5.80E-68
SignalP 1 11 11
MobiDBLite 647 685 39
Gene3D 911 1031 121 4.90E-07
MobiDBLite 1240 1263 24
PANTHER 1255 1459 205 5.80E-68
PANTHER 1255 1459 205 5.80E-68
MobiDBLite 1277 1332 56
PANTHER 1503 1668 166 5.80E-68
PANTHER 1503 1668 166 5.80E-68
ProSiteProfiles 1509 1652 144 11.98
SMART 1518 1658 141 2.00E-24
SUPERFAMILY 1527 1675 149 4.19E-28
Gene3D 1527 1676 150 2.10E-35
Pfam 1591 1652 62 1.60E-11

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Expression data

Expression pattern

Expression pattern of Lj2g3v2985910.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v2985910.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.