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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001608
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.522s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj6g3v0856580.1
n.a. PREDICTED: proline synthase co-transcribed bacterial homolog protein-like isoform X1 [Cicer arietinum] gi|502166388|ref|XP_004513878.1| chr6 8502976 8506213 +
2 domain predictions
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Lj6g3v1812160.1
n.a. PREDICTED: proline synthase co-transcribed bacterial homolog protein-like [Cicer arietinum] gi|502079184|ref|XP_004486181.1| chr6 20264377 20267448 -
2 domain predictions
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LotjaGi6g1v0156000.1
n.a. Proline synthase co-transcribed bacterial; TAIR: AT4G26860.1 Putative pyridoxal phosphate-dependent enzyme, YBL036C type; Swiss-Prot: sp|Q9Z2Y8|PROSC_MOUSE Proline synthase co-transcribed bacterial homolog protein; TrEMBL-Plants: tr|A0A0S3S737|A0A0S3S737_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0156000 LjG1.1_chr6 43542619 43545642 +
2 domain predictions
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LotjaGi6g1v0156000.2
n.a. Proline synthase co-transcribed bacterial; TAIR: AT4G26860.1 Putative pyridoxal phosphate-dependent enzyme, YBL036C type; Swiss-Prot: sp|Q9Z2Y8|PROSC_MOUSE Proline synthase co-transcribed bacterial homolog protein; TrEMBL-Plants: tr|A0A0S3S737|A0A0S3S737_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0156000 LjG1.1_chr6 43542619 43545642 +
2 domain predictions
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LotjaGi6g1v0290900.1
n.a. Proline synthase co-transcribed bacterial; TAIR: AT1G11930.2 Putative pyridoxal phosphate-dependent enzyme, YBL036C type; Swiss-Prot: sp|Q3T0G5|PROSC_BOVIN Proline synthase co-transcribed bacterial homolog protein; TrEMBL-Plants: tr|I3T823|I3T823_MEDTR Proline synthetase associated protein; Found in the gene: LotjaGi6g1v0290900 LjG1.1_chr6 60797803 60801113 -
2 domain predictions
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