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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001882
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 14 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.354s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0268829.1
n.a. PREDICTED: acetyl-CoA carboxylase 1-like [Glycine max] gi|356508126|ref|XP_003522811.1| chr0 139230600 139243243 +
2 domain predictions
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Lj1g3v2838150.1
n.a. PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic-like [Glycine max] gi|356531878|ref|XP_003534503.1| chr1 32288256 32297348 -
2 domain predictions
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Lj1g3v3008790.1
n.a. biotin carboxyl carrier protein subunit [Glycine max] gi|351721795|ref|NP_001235174.1| chr1 34196828 34202744 +
2 domain predictions
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Lj2g3v1079560.1
n.a. PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic-like [Glycine max] gi|356551156|ref|XP_003543944.1| chr2 17554613 17557342 +
2 domain predictions
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Lj5g3v1003320.1
n.a. PREDICTED: methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial-like isoform X2 [Cicer arietinum] gi|502115337|ref|XP_004495179.1| chr5 15781280 15787890 -
2 domain predictions
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LotjaGi1g1v0246300.2
n.a. Acetyl-CoA carboxylase; TAIR: AT1G36160.1 acetyl-CoA carboxylase 1; Swiss-Prot: sp|Q38970|ACC1_ARATH Acetyl-CoA carboxylase 1; TrEMBL-Plants: tr|A0A0R0K6S7|A0A0R0K6S7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0246300 LjG1.1_chr1 59093162 59109061 +
2 domain predictions
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LotjaGi1g1v0246300.3
n.a. Acetyl-CoA carboxylase; TAIR: AT1G36160.1 acetyl-CoA carboxylase 1; Swiss-Prot: sp|Q38970|ACC1_ARATH Acetyl-CoA carboxylase 1; TrEMBL-Plants: tr|A0A0R0K6S7|A0A0R0K6S7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0246300 LjG1.1_chr1 59093322 59109042 +
2 domain predictions
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LotjaGi1g1v0246300.4
n.a. Acetyl-CoA carboxylase; TAIR: AT1G36160.1 acetyl-CoA carboxylase 1; Swiss-Prot: sp|Q38970|ACC1_ARATH Acetyl-CoA carboxylase 1; TrEMBL-Plants: tr|I1JVH6|I1JVH6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0246300 LjG1.1_chr1 59094710 59108673 +
2 domain predictions
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LotjaGi1g1v0246300.5
n.a. Acetyl-CoA carboxylase; TAIR: AT1G36160.1 acetyl-CoA carboxylase 1; Swiss-Prot: sp|Q38970|ACC1_ARATH Acetyl-CoA carboxylase 1; TrEMBL-Plants: tr|A0A0R0K6S7|A0A0R0K6S7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0246300 LjG1.1_chr1 59094710 59108673 +
2 domain predictions
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LotjaGi1g1v0246300.6
n.a. Acetyl-CoA carboxylase; TAIR: AT1G36160.1 acetyl-CoA carboxylase 1; Swiss-Prot: sp|Q38970|ACC1_ARATH Acetyl-CoA carboxylase 1; TrEMBL-Plants: tr|A0A0R0K6S7|A0A0R0K6S7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0246300 LjG1.1_chr1 59097181 59108583 +
2 domain predictions
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LotjaGi1g1v0486900.1
n.a. Biotin carboxyl carrier protein of acetyl-CoA carboxylase; TAIR: AT5G16390.1 chloroplastic acetylcoenzyme A carboxylase 1; Swiss-Prot: sp|Q42783|BCCP_SOYBN Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic; TrEMBL-Plants: tr|I3RZK7|I3RZK7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0486900 LjG1.1_chr1 99990485 99999262 -
2 domain predictions
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LotjaGi1g1v0510100.1
n.a. Biotin carboxyl carrier protein of acetyl-CoA carboxylase; TAIR: AT5G15530.1 biotin carboxyl carrier protein 2; Swiss-Prot: sp|Q9LLC1|BCCP2_ARATH Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic; TrEMBL-Plants: tr|I3SZG2|I3SZG2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0510100 LjG1.1_chr1 102881143 102884822 +
2 domain predictions
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LotjaGi2g1v0265400.1
n.a. Biotin carboxyl carrier protein of acetyl-CoA carboxylase; TAIR: AT5G15530.1 biotin carboxyl carrier protein 2; Swiss-Prot: sp|Q9LLC1|BCCP2_ARATH Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic; TrEMBL-Plants: tr|I3SWG0|I3SWG0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0265400 LjG1.1_chr2 73477975 73480869 +
2 domain predictions
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LotjaGi5g1v0170200.1
n.a. Acetyl-CoA carboxylase, putative; TAIR: AT1G03090.2 methylcrotonyl-CoA carboxylase alpha chain; Swiss-Prot: sp|Q42777|MCCA_SOYBN Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial; TrEMBL-Plants: tr|A0A151QXF8|A0A151QXF8_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0170200 LjG1.1_chr5 43773156 43782290 -
2 domain predictions
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