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Field | Value |
---|---|
Gene ID | Lj0g3v0268829 |
Transcript ID | Lj0g3v0268829.1 |
Related isoforms 1 | |
Lotus japonicus genome version | MG20 v3.0 |
Description | PREDICTED: acetyl-CoA carboxylase 1-like [Glycine max] gi|356508126|ref|XP_003522811.1| |
Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 219 | 219 | 0 | – | |
PANTHER | 1 | 219 | 219 | 0 | – | |
ProSiteProfiles | 60 | 134 | 75 | 18.235 | ||
Gene3D | 61 | 133 | 73 | 4.80E-08 | – | |
SUPERFAMILY | 66 | 136 | 71 | 1.18E-08 | ||
CDD | 69 | 133 | 65 | 2.44E-12 | – | |
Pfam | 71 | 133 | 63 | 7.70E-09 | ||
ProSitePatterns | 91 | 108 | 18 | – | ||
Pfam | 134 | 877 | 744 | 3.00E-193 | ||
PANTHER | 272 | 410 | 139 | 0 | – | |
PANTHER | 272 | 410 | 139 | 0 | – | |
PANTHER | 431 | 546 | 116 | 0 | – | |
PANTHER | 431 | 546 | 116 | 0 | – | |
PANTHER | 576 | 619 | 44 | 0 | – | |
PANTHER | 576 | 619 | 44 | 0 | – | |
PANTHER | 642 | 704 | 63 | 0 | – | |
PANTHER | 642 | 704 | 63 | 0 | – | |
PANTHER | 739 | 772 | 34 | 0 | – | |
PANTHER | 739 | 772 | 34 | 0 | – | |
PANTHER | 796 | 1644 | 849 | 0 | – | |
PANTHER | 796 | 1644 | 849 | 0 | – | |
Gene3D | 876 | 1036 | 161 | 1.80E-66 | ||
SUPERFAMILY | 885 | 1211 | 327 | 1.71E-77 | ||
Pfam | 977 | 1528 | 552 | 4.70E-171 | ||
ProSiteProfiles | 1006 | 1185 | 180 | 8.898 | ||
Gene3D | 1100 | 1211 | 112 | 1.80E-66 | ||
ProSiteProfiles | 1186 | 1500 | 315 | 42.825 | ||
Gene3D | 1216 | 1610 | 395 | 6.20E-140 | ||
SUPERFAMILY | 1216 | 1604 | 389 | 7.46E-106 | ||
Coils | 1441 | 1461 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Acetyl-CoA carboxylase activity | Catalysis of the reaction: ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Fatty acid biosynthetic process | The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes. | ||
Molecular function | Ligase activity | Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate. |
Expression pattern of Lj0g3v0268829.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0268829.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.