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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002781
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 29 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.588s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0309949.1
n.a. membrane protein-like protein [Glycine max] gi|83853809|gb|ABC47842.1| chr0 161796821 161801637 +
2 domain predictions
1 GO term
Lj0g3v0329679.1
n.a. Os09g0344800 [Oryza sativa Japonica Group] gi|115478679|ref|NP_001062933.1| chr0 172337293 172341749 -
2 domain predictions
1 GO term
Lj0g3v0329679.2
n.a. Sulfite exporter TauE/SafE family protein [Theobroma cacao] gi|508782418|gb|EOY29674.1| chr0 172337293 172341749 -
2 domain predictions
1 GO term
Lj0g3v0329679.3
n.a. Sulfite exporter TauE/SafE family protein [Theobroma cacao] gi|508782418|gb|EOY29674.1| chr0 172337293 172341749 -
2 domain predictions
1 GO term
Lj1g3v2036650.1
n.a. Sulfite exporter TauE/SafE family protein [Arabidopsis thaliana] gi|30682879|ref|NP_850068.1| chr1 24024342 24029482 -
2 domain predictions
1 GO term
Lj1g3v4692980.1
n.a. Sulfite exporter TauE/SafE family protein isoform 2 [Theobroma cacao] gi|508716173|gb|EOY08070.1| chr1 55746120 55749755 +
2 domain predictions
1 GO term
Lj2g3v1758510.1
n.a. Membrane protein-like protein [Medicago truncatula] gi|357483379|ref|XP_003611976.1| chr2 27078934 27083417 +
2 domain predictions
1 GO term
Lj4g3v0423000.1
n.a. Sulfite exporter TauE/SafE family protein [Arabidopsis thaliana] gi|186512097|ref|NP_193857.3| chr4 5572382 5575348 +
2 domain predictions
1 GO term
Lj4g3v0423000.3
n.a. Sulfite exporter TauE/SafE family protein [Arabidopsis thaliana] gi|15220600|ref|NP_176367.1| chr4 5573226 5575348 +
2 domain predictions
1 GO term
Lj4g3v0934550.1
n.a. Sulfite exporter TauE/SafE family protein [Theobroma cacao] gi|508782418|gb|EOY29674.1| chr4 13718881 13721921 -
2 domain predictions
1 GO term
Lj4g3v0934550.2
n.a. Sulfite exporter TauE/SafE family protein [Theobroma cacao] gi|508782418|gb|EOY29674.1| chr4 13718881 13721865 -
2 domain predictions
1 GO term
Lj4g3v2630940.2
n.a. Sulfite exporter TauE/SafE family protein [Arabidopsis thaliana] gi|30682879|ref|NP_850068.1| chr4 35881542 35891601 -
2 domain predictions
1 GO term
Lj4g3v2630940.3
n.a. Sulfite exporter TauE/SafE family protein [Arabidopsis thaliana] gi|30682879|ref|NP_850068.1| chr4 35881542 35886234 -
2 domain predictions
1 GO term
Lj4g3v2630940.4
n.a. Sulfite exporter TauE/SafE family protein [Theobroma cacao] gi|508782418|gb|EOY29674.1| chr4 35887315 35891601 -
2 domain predictions
1 GO term
Lj6g3v2168650.1
n.a. Sulfite exporter TauE/SafE family protein [Arabidopsis thaliana] gi|15220600|ref|NP_176367.1| chr6 24992289 24994443 -
2 domain predictions
1 GO term
LotjaGi1g1v0399700.1
n.a. Sulfite exporter TauE/SafE family protein; TAIR: AT2G25737.1 Sulfite exporter TauE/SafE family protein; Swiss-Prot: sp|O34430|YTNM_BACSU UPF0721 transmembrane protein YtnM; TrEMBL-Plants: tr|K7KIU3|K7KIU3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0399700 LjG1.1_chr1 88716166 88721657 +
2 domain predictions
1 GO term
LotjaGi1g1v0681700.1
n.a. Sulfite exporter TauE/SafE family protein; TAIR: AT2G36630.1 Sulfite exporter TauE/SafE family protein; Swiss-Prot: sp|Q9R1X5|MRP5_MOUSE Multidrug resistance-associated protein 5; TrEMBL-Plants: tr|A0A072UE30|A0A072UE30_MEDTR Sulfite exporter TauE/SafE family protein; Found in the gene: LotjaGi1g1v0681700 LjG1.1_chr1 124897574 124901363 -
2 domain predictions
1 GO term
LotjaGi2g1v0390900.1
n.a. Sulfite exporter TauE/SafE family protein; TAIR: AT2G25737.1 Sulfite exporter TauE/SafE family protein; Swiss-Prot: sp|Q57883|Y441_METJA UPF0721 transmembrane protein MJ0441; TrEMBL-Plants: tr|A0A151TI87|A0A151TI87_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0390900 LjG1.1_chr2 88705072 88709640 -
2 domain predictions
1 GO term
LotjaGi2g1v0390900.2
n.a. Sulfite exporter TauE/SafE family protein; TAIR: AT2G25737.1 Sulfite exporter TauE/SafE family protein; Swiss-Prot: sp|Q57883|Y441_METJA UPF0721 transmembrane protein MJ0441; TrEMBL-Plants: tr|A0A067GIP1|A0A067GIP1_CITSI Uncharacterized protein; Found in the gene: LotjaGi2g1v0390900 LjG1.1_chr2 88705343 88706487 -
2 domain predictions
1 GO term
LotjaGi4g1v0045000.1
n.a. Sulfite exporter TauE/SafE family protein, putative; TAIR: AT1G61740.1 Sulfite exporter TauE/SafE family protein; Swiss-Prot: sp|Q57883|Y441_METJA UPF0721 transmembrane protein MJ0441; TrEMBL-Plants: tr|I1KLA0|I1KLA0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0045000 LjG1.1_chr4 5313117 5318280 +
2 domain predictions
1 GO term
LotjaGi4g1v0115300.1
n.a. Sulfite exporter TauE/SafE family protein; TAIR: AT2G25737.1 Sulfite exporter TauE/SafE family protein; Swiss-Prot: sp|P9WGL3|KDPD_MYCTU Sensor protein KdpD; TrEMBL-Plants: tr|A0A1J7GTJ5|A0A1J7GTJ5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0115300 LjG1.1_chr4 16679227 16683783 -
2 domain predictions
1 GO term
LotjaGi4g1v0115300.2
n.a. Sulfite exporter TauE/SafE family protein; TAIR: AT2G25737.1 Sulfite exporter TauE/SafE family protein; Swiss-Prot: sp|O34578|YJNA_BACSU UPF0721 transmembrane protein YjnA; TrEMBL-Plants: tr|A0A0S3RNP7|A0A0S3RNP7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0115300 LjG1.1_chr4 16680274 16683677 -
2 domain predictions
1 GO term
LotjaGi4g1v0116400.1
n.a. Sulfite exporter TauE/SafE family protein; TAIR: AT2G25737.1 Sulfite exporter TauE/SafE family protein; Swiss-Prot: sp|P54437|YRKJ_BACSU UPF0721 transmembrane protein YrkJ; TrEMBL-Plants: tr|K7KHZ9|K7KHZ9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0116400 LjG1.1_chr4 16845678 16850866 +
2 domain predictions
1 GO term
LotjaGi4g1v0383500.1
n.a. Sulfite exporter TauE/SafE family protein; TAIR: AT2G25737.1 Sulfite exporter TauE/SafE family protein; Swiss-Prot: sp|P44054|Y806_HAEIN UPF0721 transmembrane protein HI_0806; TrEMBL-Plants: tr|A0A0R0IKQ8|A0A0R0IKQ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0383500 LjG1.1_chr4 76210869 76216841 -
2 domain predictions
1 GO term
LotjaGi4g1v0383700.1
n.a. Sulfite exporter TauE/SafE family protein; TAIR: AT2G25737.1 Sulfite exporter TauE/SafE family protein; Swiss-Prot: sp|P54437|YRKJ_BACSU UPF0721 transmembrane protein YrkJ; TrEMBL-Plants: tr|G7L816|G7L816_MEDTR Sulfite exporter TauE/SafE family protein; Found in the gene: LotjaGi4g1v0383700 LjG1.1_chr4 76230423 76240265 -
2 domain predictions
1 GO term
LotjaGi4g1v0383700.2
n.a. Sulfite exporter TauE/SafE family protein; TAIR: AT2G25737.1 Sulfite exporter TauE/SafE family protein; Swiss-Prot: sp|Q57883|Y441_METJA UPF0721 transmembrane protein MJ0441; TrEMBL-Plants: tr|B7FND1|B7FND1_MEDTR Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0383700 LjG1.1_chr4 76236241 76240566 -
2 domain predictions
1 GO term
LotjaGi4g1v0383700.3
n.a. Sulfite exporter TauE/SafE family protein; TAIR: AT2G25737.1 Sulfite exporter TauE/SafE family protein; Swiss-Prot: sp|Q57883|Y441_METJA UPF0721 transmembrane protein MJ0441; TrEMBL-Plants: tr|A0A151UC33|A0A151UC33_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0383700 LjG1.1_chr4 76236415 76238542 -
2 domain predictions
1 GO term
LotjaGi5g1v0144100.1
n.a. Sulfite exporter TauE/SafE family protein; TAIR: AT2G25737.1 Sulfite exporter TauE/SafE family protein; Swiss-Prot: sp|Q80VM8|PNML1_MOUSE PNMA-like protein 1; TrEMBL-Plants: tr|V7CWP2|V7CWP2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0144100 LjG1.1_chr5 36239088 36245384 +
2 domain predictions
1 GO term
LotjaGi6g1v0345000.1
n.a. Sulfite exporter TauE/SafE family protein, putative; TAIR: AT1G61740.1 Sulfite exporter TauE/SafE family protein; Swiss-Prot: sp|P54437|YRKJ_BACSU UPF0721 transmembrane protein YrkJ; TrEMBL-Plants: tr|G7IFE5|G7IFE5_MEDTR Sulfite exporter TauE/SafE family protein, putative; Found in the gene: LotjaGi6g1v0345000 LjG1.1_chr6 65746878 65750336 -
2 domain predictions
1 GO term