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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0309949 |
| Transcript ID | Lj0g3v0309949.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | membrane protein-like protein [Glycine max] gi|83853809|gb|ABC47842.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 52 | 52 | – | – | |
| PANTHER | 13 | 448 | 436 | 0 | – | |
| PANTHER | 13 | 448 | 436 | 0 | – | |
| Phobius | 53 | 70 | 18 | – | – | |
| Pfam | 61 | 170 | 110 | 2.40E-09 | ||
| TMHMM | 61 | 83 | 23 | – | – | |
| Phobius | 71 | 75 | 5 | – | – | |
| Phobius | 76 | 92 | 17 | – | – | |
| Phobius | 93 | 98 | 6 | – | – | |
| Phobius | 99 | 117 | 19 | – | – | |
| Phobius | 118 | 136 | 19 | – | – | |
| Phobius | 137 | 170 | 34 | – | – | |
| TMHMM | 147 | 169 | 23 | – | – | |
| Phobius | 171 | 234 | 64 | – | – | |
| MobiDBLite | 198 | 217 | 20 | – | – | |
| Phobius | 235 | 254 | 20 | – | – | |
| Phobius | 255 | 259 | 5 | – | – | |
| Phobius | 260 | 285 | 26 | – | – | |
| Phobius | 286 | 305 | 20 | – | – | |
| Phobius | 306 | 331 | 26 | – | – | |
| TMHMM | 308 | 330 | 23 | – | – | |
| Pfam | 311 | 416 | 106 | 1.50E-12 | ||
| Phobius | 332 | 342 | 11 | – | – | |
| Phobius | 343 | 362 | 20 | – | – | |
| TMHMM | 345 | 367 | 23 | – | – | |
| Phobius | 363 | 373 | 11 | – | – | |
| Phobius | 374 | 393 | 20 | – | – | |
| TMHMM | 374 | 393 | 20 | – | – | |
| Phobius | 394 | 398 | 5 | – | – | |
| Phobius | 399 | 424 | 26 | – | – | |
| TMHMM | 403 | 425 | 23 | – | – | |
| Phobius | 425 | 448 | 24 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj0g3v0309949.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0309949.1, powered by CORGI.
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