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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0383700 |
| Transcript ID | LotjaGi4g1v0383700.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sulfite exporter TauE/SafE family protein; TAIR: AT2G25737.1 Sulfite exporter TauE/SafE family protein; Swiss-Prot: sp|Q57883|Y441_METJA UPF0721 transmembrane protein MJ0441; TrEMBL-Plants: tr|A0A151UC33|A0A151UC33_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0383700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:76236415..76238542) extracted from Lotus japonicus Gifu genome v1.2.
CTTGATGTGATCTTCATGTGAAACAGTCATTTCGATTAAAGCATTCTTAAAGGGTGTTGATACATGGAAAAAAGAAACCC TTGTCAAGAAGGTTGCTTCAATGTTGCTCATCTTTTTTATTTATTCTTTTTTTCCCATTTTGGTGCTTTGGTTTAATGCA TCATTGTTACAATTTCAGGAAACTAAGCTGAATTCACAGTTAAATGGTATGTGGTATGATATTATTTCTATTAATTATAG CCTTATGTAGAGAGTGTTTATCAAACATGTCATGCTAATTTTCAGTCTAATTAGATATTGGAAGGATTGAAGATGCTACA CATGATCTTCAAACAGGAGACAGAGTCACTGAGAGTCACACCAATATCAATCAATCAAGGAAAAAAGTAATAGATTATAC AGTGATTTTCTGCTTCCATAGTTCCATGTCCAACATCTATTCTTTCTTTTTTCTAATGAAATTTAAAATGCAGGTTTCTG TTATTGAGAACATTTATTGGAAGGAACTTGGAATTCTTTCATCTGTTTGGATCATGATACTTGCATTGCAGATAGGAAAA GTTAGTATCAAATGAGCTATTCAACTCATAAATTACGTTTAGGATTCTCTTGTATAGTTGTATGCATTGGTGGACATTCA TCAACATTGGTGATATCATATGCTCTTGTTTTGAAACAGAATTACACAACAACTTGCTCAGTGTTATACTGGACATTGAA TTTACTTCAGGTATAAACTTCTTTAGGAGAATTCAAAAGCTAGAAACCAAAATTTTCAAAGTTTTTGAAACAGAATTACA CAACAACTTGGCCTTTAGTGTTGAGCACTGAAGAGTATGATTTGACCTTAACTTTAACTCTTGTTAAAGAACCAATGAAC CACCAATATCATGATGATTAGTTTCTTTCATTTCAGGTTCCCATTGCTGTAGGAGTGAGTTCATATGAGGCTGTGCTTTT ATACAAAGGGCAGAGATTCATAGCATCCAAGGGTGATCAACAAATAAATTGGCGAATTCGACAGTTAATTCTGTATGGTG TTTGTGGCTTAATTGCTGGCATAATTGGTGGATTGCTTGGTCTTGGTGGAGGATTCATCTTGGGACCCCTTTTCATCGGA CTAGGAATTCCTCCTCAGGTACCTTTGACCCTTCTCTTTTCCATGAATTCAATGAAGATTTGAGGACTCCTTGACTAAGA TTTTATATTGGTTCCCTTGGCTGGGGAATTTTCCTTAAAGGTGGCAAGTGCTACTTCCACTTTTGCAATGACATTTTCTG CATCTATGTCAGTGGTGGAATATTACCTTCTCAAACGTTTTCCTATTCCTTATGGTAAGTCAAATTAATAGAGAAGGAAC TGCGCATGTTTGGAAAAGCTTTTGAGTTTCATCTGAGTGTCAAATTTGATTCTGAGGAAAGATAAGCTAATTTTAACATG CTACAACAATATTTCCAGAAGTGTAATTCTCTCATTCTCCAAGAACACATATATAGGGGTTGTTAAGTAACTTCATGATG GATTGGTGATTAACTAATTGGTTAAGAAGAAAAGGATTGCTACCATAAAAGAAAGCAATAACTTTTTATTATGGACTTGT TAATATTAAATGTTTGTTTATCTTGCAGCTCTTTACTTTGTAGCTGTAGCCACTGTTGCTGCACTTGTTGGGCAACATTT AGTGAGAAAGTTGATTGCCATACTGGGAAGAGCATCTGTGATCATTTTCATCCTAGCCCTCACAATTTTTGTGAGTGGAG TAACACTAGGCAAGTTTCATTTGGAGATTCTTTTGGTATTTTTCATTTTTGTGATGGTATCTATACTCTAGTAACATGAC CTATAGTTTTCATGTACCAAAGATAATAATTAACTATATATTTTATTTACTTATTTGAGGTAACTTTTAATTGTTCGATT TTTTTTTTCAAATTACAGGAGGAGTAGGCATAGCAAACATGATTGAAAGAATTGAAAAGAAGGAGTACATGGGGTTTGAA AACCTATGCTCGTACGGGGTTAGAACTTAAAGTTCAAGATGCTTAGAGTGTAGAACTCTATATGGTTGCATTTTCAGGAT TTGTCTAAAAAAATTACCTTATTTGTAAAGCCCATGGACTGAACCTTA
CDS sequence (LotjaGi4g1v0383700.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATACTTGCATTGCAGATAGGAAAAGTTCCCATTGCTGTAGGAGTGAGTTCATATGAGGCTGTGCTTTTATACAAAGG GCAGAGATTCATAGCATCCAAGGGTGATCAACAAATAAATTGGCGAATTCGACAGTTAATTCTGTATGGTGTTTGTGGCT TAATTGCTGGCATAATTGGTGGATTGCTTGGTCTTGGTGGAGGATTCATCTTGGGACCCCTTTTCATCGGACTAGGAATT CCTCCTCAGGTGGCAAGTGCTACTTCCACTTTTGCAATGACATTTTCTGCATCTATGTCAGTGGTGGAATATTACCTTCT CAAACGTTTTCCTATTCCTTATGCTCTTTACTTTGTAGCTGTAGCCACTGTTGCTGCACTTGTTGGGCAACATTTAGTGA GAAAGTTGATTGCCATACTGGGAAGAGCATCTGTGATCATTTTCATCCTAGCCCTCACAATTTTTGTGAGTGGAGTAACA CTAGGAGGAGTAGGCATAGCAAACATGATTGAAAGAATTGAAAAGAAGGAGTACATGGGGTTTGAAAACCTATGCTCGTA CGGGGTTAGAACTTAA
Protein sequence (LotjaGi4g1v0383700.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MILALQIGKVPIAVGVSSYEAVLLYKGQRFIASKGDQQINWRIRQLILYGVCGLIAGIIGGLLGLGGGFILGPLFIGLGI PPQVASATSTFAMTFSASMSVVEYYLLKRFPIPYALYFVAVATVAALVGQHLVRKLIAILGRASVIIFILALTIFVSGVT LGGVGIANMIERIEKKEYMGFENLCSYGVRT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | - | – | |
| Phobius | 6 | 25 | 20 | - | – | |
| PANTHER | 6 | 187 | 182 | 2.6E-104 | – | |
| PANTHER | 6 | 187 | 182 | 2.6E-104 | – | |
| Phobius | 26 | 45 | 20 | - | – | |
| Pfam | 29 | 154 | 126 | 2.6E-15 | ||
| Phobius | 46 | 72 | 27 | - | – | |
| TMHMM | 48 | 70 | 23 | - | – | |
| Phobius | 73 | 83 | 11 | - | – | |
| Phobius | 84 | 107 | 24 | - | – | |
| TMHMM | 85 | 107 | 23 | - | – | |
| Phobius | 108 | 113 | 6 | - | – | |
| Phobius | 114 | 133 | 20 | - | – | |
| TMHMM | 114 | 133 | 20 | - | – | |
| Phobius | 134 | 144 | 11 | - | – | |
| TMHMM | 143 | 165 | 23 | - | – | |
| Phobius | 145 | 170 | 26 | - | – | |
| Phobius | 171 | 191 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi4g1v0383700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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