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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0116400 |
| Transcript ID | LotjaGi4g1v0116400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sulfite exporter TauE/SafE family protein; TAIR: AT2G25737.1 Sulfite exporter TauE/SafE family protein; Swiss-Prot: sp|P54437|YRKJ_BACSU UPF0721 transmembrane protein YrkJ; TrEMBL-Plants: tr|K7KHZ9|K7KHZ9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0116400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:16845678..16850866) extracted from Lotus japonicus Gifu genome v1.2.
TGAAGAGGCACTCTTTCTTAGTCCTTACTTTTCATAGTTTCTTCCCTCAATCATACTCGTAGAACCATCATAATAAAACA TAAGCAGAGGGGAAAAAAAAGAAAGAACACATATATAGCATTATTAGTCCCACATAATTTATTTTAGACTTCTACCTCTT CCTTCTCACCATTCATAAATGGCTTTGAAAGTTAGAAACAAGACTTCAGGAGCATTGGTAACAGCTACATGGATTGTCTC GTGGAGCCTTATCATGATCTATAATGTCAGTTCAGCAAAGAGAGTTTTGGAAGAACCAAAATCAGAAAGCTTTGTTCTGA AACAAAAACAAGGAGCTGTGGTTGGAGTGTTTGATTTCTTCTGGAAGAGTGGAGAGTCTTCCTATGAACGTGTTTGGCCT GTGAGTTTATGAAATGCTTTTTCATATTATAAGTGACATTTAATTTGAGCCTTTAGTTATGTTTTTGTTATTATCTCCTC TATTATGTTAACGTGTTATGTTTACTTGAAATTTTTGCTGGTTTATTGAGCAGGAAATGAAGTTCGGTTGGAGAATAATA GTAGGATCAATTGTTGGATTTTTCGGAGCAGCGCTAGGTAGTGTTGGCGGGGTTGGAGGCGGAGGAATTTTTATCCCTAT GCTCACTTTGATCATTGGTTTTGACCCCAAGTCTTCTACAGCCATTTCTAAGTGTTAGTATATTGCTCTGTTATGTTTAT CCTTTCATGCTAGATATGAGTAAAACATGGCCATGGCATGCTTCCTTTCAGTAGTGCACAAAGGCCTTGTTGATCTATTG AGCCAATCAAAGATTATACAAGCTTCTAAATTGCGACTGAGGTTGCATTGCAGAATAGCGGACATATGCAGGTTGAAATG GCTGCAGTTGTGATTGCGATGCCGTTGAGGAGACTTCAAAACACTTTACGCAGTTGTGGACTGCAATTTAAAACCCTCAT TTGTGGGATGCATTTACTTAATTGCTTGCATACATAATTAATACTCGTATACATATAATGTCGAATATGAAATGTTGTCA ACCATCATACCCTAAATATCTGTCATGAACCAACTATCTTAAAATAAGGATTGAACTCTAAACCAATTGGTCACTGAGGC TCTGATATCATATCATGAACCAGCTATCCCAAAAACTTAAGTTGTTGTATGAAGCAGGGTTGTTAATGGCGGATAGCATA GTGTAGCGGCACACCCAAAAAAACGCTATCTCGAGCGCTATAGCGGAAAACAGCGCAAATAGCGGTGAATAGTAGAGTAG CGGTGAACCCCCAGGCCGCTACGCTATAGGCTATTGCGCCGCTATAGCGCGCTATTAACAAGCCTGGTATGAAGACACGT GAATGGTTTTATATTATATTTCTAACACTATCAAAGAAAATATAGTTTCATATTAGTTTACTTCAACACAACTTCATTCA ATTTCTGGATTCCACATATTTAGATGTTGTTTCATAATCACAGGTATGATTACAGGAGCAGCAGGGTCAACTGTGTATTA CAATCTGAGGCTTAGGCACCCAACTTTAGACATGCCACTTATAGATTATGATCTGGCTTTGCTCTTCCAGCCTATGCTAA TGTTAGGAATAAGCATTGGTGTTGCGTTTAATGTCATGTTTGCTGATTGGATGGTGACGGTTTTGCTTATCATCCTATTC ATTGGTAATCACACTTTAATTAGCATAAGCTTAATCTTCTTATGTGATCCAATATTTCATGAACACTCTCATATTACACA CTAGCTGTTGTATTGGTCAAGATCTAATAACCAGCTTATGGCACACAACACATGACATGATTACTTGTTGTTATATCGGG AATATCTTAATAATGGTTTGTTTGAATCGATGAAATTAATCTGCTGTAGGCACATCCACAAAAGCTTTATCCAAAGGCTT AGATACATGGAAAAAGGAAACAATTATGAAGAAGGTAAAATTCATATGCTTCCAAAAATTTGAAGTTGAGTCTCCATGGT TTTCTACTTGATAGTGGGAATATTATGCTAATGAAATTTCTTAATTTCAGGAAGCAGCCAAGATGTTGGAATCAGATCCT GGTTGTAAGTCCTTATTGTCCTTTCTTTAAAATATAGAGAAACCTTTGAGTATCTATATATATAAGAGATAATTGCAAAA TCTGAAAATAACAAGAAGCAAATTAAGAACACATAAAAAATAGGATTTATCAGATAAGAACAGATGAACATATTCATTTT CTCAATATATGTACCAGTTTAGGCCTGAATTCAGTTGTCTAGACCCTAAATAGGAGAAAAATTATATTTACAACTTCTCA TAAACTATGCTAACAACTTGAGGATTTTTAGTTTCATGTTCATGAATATGTTCAAGTATATCATACAATAAAAAAAGGAA CTTACTCAAACAGTCATTTGGTGGAGCAAATGACACAGAAGCTGAAGTCACTGTTTTTCCACATCGAAATCAAAATATTG TACACACTTTGTGACAACTTGATACGATTTAACCCAAATATGAACGCCTAATTTTACACGTGCTCAAGATTTAGTCCTTA ATTAACATTTGGACGATCTAATAGTAATGTCTCTAATATTTCTGTTGAACCAATATTGCACTCACTGACTTACCCATTGC TGCAGATGTTTCTGAAGAAGAGTACAAGACATTACCAAGTGGTTCAGCTGAACCACAAGATGAGGAGGTAAGTCCAAGGG TTTTTCAAATCACTTTTAAGAGAAAATTTGTTGAAGCTTTATCTTGCTTTTTACACTGTGTTAAGTTCTTGTTTGCAGGT TCCTTTACTAAAGAACATTTACTGGAAAGAATTATCAGTCCTTGCATATGTCTGGGTGGCTTTTCTCATTGTTCAGATTA TAAAGGTAGATAACCTATCATTAGCATGTCTGGATCAGCTTATTTTTCCTCAAAATCAATTCTAGCACTACTCACAAGCT TCTCTCAAGAATTGATTCTGAATATAGAACTAGTGGATCCAACAAAACTTTATGATTACTAAATATGCACCTTTTATGTA TTTCCATACAGACATACAGCAAAACTTGCTCCATACAGTACTGGATTCTTGAATCCTTACAGGTAAAGATTCTAAACATA AATTTGACACTATGGTACCCGATAATGATTTCAGCTATGTTTTATGATACACCAGCTTCGCAAAGTTAACAAATACAGAA TAAAAAAGACAATTTGTTATAAGGTAGCAATCGTTGGAATTCATAACAAAAAACAATTTTCCTGGAGGCAATAGTAGGCA AATGATTCTTAATTTGCTAGCAAAATCTCAATTGGAAGTTGGAACAAACAGAACTAAATAAAACTTGTTGTGCCTATTTT TCCCTTGAAGGTTCCTATTGCAATATCTGTTACACTTTATGAAGCCATATGCTTATGCAAAGGAACTAGAGTGATTGCAT CAAAGGGAAAAGAAATCACAGATTGGAAGTTTCATAAGATCTGTCTTTACTGCTCCTGTGGAATAATAGCTGGTATGGTC AGTGGACTGCTTGGTCTGGGAGGTGGCTTCATTCTTGGACCATTGTTTCTGGAATTGGGAATTCCTCCTCAGGTAAAGAT TAATCCATTCTTGAGCATTTATAGCATGTTTGAAGTAGCTTCTGTTTCCTCATAATCAGTTCTGGAACTAAGAAGCTACT CACAGAAGCTTCTCCCTAAAATTGATTCTGACTATAGAATCAATTGTAGAAGTATTTCTAAAAATGAACTTGCAATTTTT TAGGTTTTTGAGAACAATCAGACTCATAAATAGCTTTGGTGAATATGTCTTCTATGGCAGGTAGCTAGTGCTACATCAAC TTTTGCTATGGTTTTCTCTTCCTCCATGTCAGTGGTACAATATCACTTGCTAGATCGCTTCCCTGTGCCTTATGGTAAGT AAAAATCAATCAAGCTAAGTGCATGTTTCGTTTAGCATTGGGGGAAGAAATTTTGGATGAAATTGGTTTTGACAAAATTA GATTAAGATAAAAGTGAGTTAAAGTAATGTGATATATCATATATGTTTGGATACATTTACTATAGAAGTGATTTTTAAAG GAAAGTAGTAGAAATATCTTGTGAAAATAGATAGAATAACTTTCATGTTAACTCAAAAGCTGGATTTGTTTGCTTTGGTC TTAACATGATTTTTTCTGCCTAAAAGTGTTTCTACGAATTCCACTCATACATGTTTTGATGATGAAAAAACATGTTAGAG AAGATTAGAAGTGCTTATGTGGATCAGAAACATGAAACCAAACATATACTAGTTGAAATGATTCCTGGATATACTAACGA GTATCTGGAATGACAAGAGAGACTTACTGAACAAACGTACATTAACATATCTTTTCTTCAGTATTTTTGTATTTCATCAT TGGACCTATGGGTTGAAACCAAGACAGAAAAGTACACTAGTTGCACTAGATTTTGAATTTTGTGTTTAGATACTAGTTGA ATGCATGCAAACAAGGGGGAATTTCGTTCACTTTCAACTTTCACCCCAATTCATAAGTAGAATTTCGTTCACTTTTTATC TTGAAGTGCGTGTTAACATCTGTTAAAACATGTATTTGATGCTGATCTAGCATTTGAAGTTATGAAAGTTGTTCATTCTT TTCTTTTTCTTTGGGGGATGATGCAGCTGCATACTTTGTTCTGGTCGCGACCATAGCTGCATTAACTGGCCAGCATGTGG TGAGAAAGATAGTTGCTATCTTCGGCCGAGCATCCATCATCATCTTCATACTAGCATTCACCATTTTTGTCAGTGCAATC AGTTTAGGTACTTTCCATATTTTACTTGGAAGTCTTAATTTTCATATTATTCCCTCATTTCATTTTATGTTTATTAGTTT CTTCAAACCATACTCACTTCCTGTTTTTTTGGTATAACAGGTGGGGTGGGAATAGAGAACATGGTTGAGAAGTTGGAAAA TGAAGGGTATATGGGGTTTGAAAATATCTGCCATCAATCTTAGGTGTGTTTTGCCTTTGTAAAGCAGTTGAAATTTTCTA CACAATATTTGCTAAACTGGTGATATGATTACTTATTGGTCCATTTCATTCAAGTAAGGAAATTATTTTTTACTTTTATG TATGTGTAATTAGTGTAGATTCTGTAGAAGTTTATACTCTTCGCCTACACTGGCTGCACCATATTCTTG
CDS sequence (LotjaGi4g1v0116400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTTGAAAGTTAGAAACAAGACTTCAGGAGCATTGGTAACAGCTACATGGATTGTCTCGTGGAGCCTTATCATGAT CTATAATGTCAGTTCAGCAAAGAGAGTTTTGGAAGAACCAAAATCAGAAAGCTTTGTTCTGAAACAAAAACAAGGAGCTG TGGTTGGAGTGTTTGATTTCTTCTGGAAGAGTGGAGAGTCTTCCTATGAACGTGTTTGGCCTGAAATGAAGTTCGGTTGG AGAATAATAGTAGGATCAATTGTTGGATTTTTCGGAGCAGCGCTAGGTAGTGTTGGCGGGGTTGGAGGCGGAGGAATTTT TATCCCTATGCTCACTTTGATCATTGGTTTTGACCCCAAGTCTTCTACAGCCATTTCTAAGTGTATGATTACAGGAGCAG CAGGGTCAACTGTGTATTACAATCTGAGGCTTAGGCACCCAACTTTAGACATGCCACTTATAGATTATGATCTGGCTTTG CTCTTCCAGCCTATGCTAATGTTAGGAATAAGCATTGGTGTTGCGTTTAATGTCATGTTTGCTGATTGGATGGTGACGGT TTTGCTTATCATCCTATTCATTGGCACATCCACAAAAGCTTTATCCAAAGGCTTAGATACATGGAAAAAGGAAACAATTA TGAAGAAGGAAGCAGCCAAGATGTTGGAATCAGATCCTGGTTATGTTTCTGAAGAAGAGTACAAGACATTACCAAGTGGT TCAGCTGAACCACAAGATGAGGAGGTTCCTTTACTAAAGAACATTTACTGGAAAGAATTATCAGTCCTTGCATATGTCTG GGTGGCTTTTCTCATTGTTCAGATTATAAAGACATACAGCAAAACTTGCTCCATACAGTACTGGATTCTTGAATCCTTAC AGGTTCCTATTGCAATATCTGTTACACTTTATGAAGCCATATGCTTATGCAAAGGAACTAGAGTGATTGCATCAAAGGGA AAAGAAATCACAGATTGGAAGTTTCATAAGATCTGTCTTTACTGCTCCTGTGGAATAATAGCTGGTATGGTCAGTGGACT GCTTGGTCTGGGAGGTGGCTTCATTCTTGGACCATTGTTTCTGGAATTGGGAATTCCTCCTCAGGTAGCTAGTGCTACAT CAACTTTTGCTATGGTTTTCTCTTCCTCCATGTCAGTGGTACAATATCACTTGCTAGATCGCTTCCCTGTGCCTTATGCT GCATACTTTGTTCTGGTCGCGACCATAGCTGCATTAACTGGCCAGCATGTGGTGAGAAAGATAGTTGCTATCTTCGGCCG AGCATCCATCATCATCTTCATACTAGCATTCACCATTTTTGTCAGTGCAATCAGTTTAGGTGGGGTGGGAATAGAGAACA TGGTTGAGAAGTTGGAAAATGAAGGGTATATGGGGTTTGAAAATATCTGCCATCAATCTTAG
Protein sequence (LotjaGi4g1v0116400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALKVRNKTSGALVTATWIVSWSLIMIYNVSSAKRVLEEPKSESFVLKQKQGAVVGVFDFFWKSGESSYERVWPEMKFGW RIIVGSIVGFFGAALGSVGGVGGGGIFIPMLTLIIGFDPKSSTAISKCMITGAAGSTVYYNLRLRHPTLDMPLIDYDLAL LFQPMLMLGISIGVAFNVMFADWMVTVLLIILFIGTSTKALSKGLDTWKKETIMKKEAAKMLESDPGYVSEEEYKTLPSG SAEPQDEEVPLLKNIYWKELSVLAYVWVAFLIVQIIKTYSKTCSIQYWILESLQVPIAISVTLYEAICLCKGTRVIASKG KEITDWKFHKICLYCSCGIIAGMVSGLLGLGGGFILGPLFLELGIPPQVASATSTFAMVFSSSMSVVQYHLLDRFPVPYA AYFVLVATIAALTGQHVVRKIVAIFGRASIIIFILAFTIFVSAISLGGVGIENMVEKLENEGYMGFENICHQS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| TMHMM | 10 | 32 | 23 | - | – | |
| PANTHER | 11 | 471 | 461 | 1.5E-263 | – | |
| PANTHER | 11 | 471 | 461 | 1.5E-263 | – | |
| Phobius | 12 | 31 | 20 | - | – | |
| Phobius | 32 | 77 | 46 | - | – | |
| Phobius | 78 | 95 | 18 | - | – | |
| TMHMM | 86 | 108 | 23 | - | – | |
| Pfam | 87 | 195 | 109 | 2.5E-10 | ||
| Phobius | 96 | 100 | 5 | - | – | |
| Phobius | 101 | 117 | 17 | - | – | |
| Phobius | 118 | 123 | 6 | - | – | |
| Phobius | 124 | 142 | 19 | - | – | |
| Phobius | 143 | 161 | 19 | - | – | |
| Phobius | 162 | 195 | 34 | - | – | |
| TMHMM | 172 | 194 | 23 | - | – | |
| Phobius | 196 | 259 | 64 | - | – | |
| Phobius | 260 | 279 | 20 | - | – | |
| Phobius | 280 | 284 | 5 | - | – | |
| Phobius | 285 | 310 | 26 | - | – | |
| Phobius | 311 | 330 | 20 | - | – | |
| Phobius | 331 | 356 | 26 | - | – | |
| TMHMM | 333 | 355 | 23 | - | – | |
| Pfam | 337 | 441 | 105 | 1.7E-13 | ||
| Phobius | 357 | 367 | 11 | - | – | |
| Phobius | 368 | 387 | 20 | - | – | |
| TMHMM | 370 | 392 | 23 | - | – | |
| Phobius | 388 | 398 | 11 | - | – | |
| TMHMM | 399 | 418 | 20 | - | – | |
| Phobius | 399 | 418 | 20 | - | – | |
| Phobius | 419 | 423 | 5 | - | – | |
| Phobius | 424 | 449 | 26 | - | – | |
| TMHMM | 428 | 450 | 23 | - | – | |
| Phobius | 450 | 473 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi4g1v0116400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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