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| Field | Value |
|---|---|
| Gene ID | Lj1g3v0052330 |
| Transcript ID | Lj1g3v0052330.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | cysteine-rich protein precursor [Glycine max] gi|351721533|ref|NP_001238492.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 23 | 23 | – | – | |
| Phobius | 1 | 3 | 3 | – | – | |
| Phobius | 1 | 23 | 23 | – | – | |
| TMHMM | 2 | 21 | 20 | – | – | |
| Phobius | 4 | 19 | 16 | – | – | |
| Phobius | 20 | 23 | 4 | – | – | |
| Phobius | 24 | 272 | 249 | – | – | |
| ProSiteProfiles | 27 | 129 | 103 | 18.471 | ||
| Pfam | 34 | 126 | 93 | 5.30E-20 | ||
| ProSiteProfiles | 135 | 243 | 109 | 21.875 | ||
| Pfam | 146 | 240 | 95 | 2.20E-14 | ||
| PANTHER | 174 | 504 | 331 | 1.20E-186 | – | |
| Gene3D | 258 | 346 | 89 | 1.40E-12 | ||
| Phobius | 273 | 299 | 27 | – | – | |
| TMHMM | 278 | 300 | 23 | – | – | |
| Phobius | 300 | 504 | 205 | – | – | |
| SUPERFAMILY | 320 | 504 | 185 | 2.43E-55 | ||
| SMART | 339 | 502 | 164 | 8.90E-08 | ||
| ProSiteProfiles | 339 | 504 | 166 | 30.577 | ||
| Pfam | 341 | 492 | 152 | 9.50E-33 | ||
| ProSitePatterns | 345 | 367 | 23 | – | ||
| Gene3D | 347 | 401 | 55 | 4.60E-26 | – | |
| Gene3D | 402 | 504 | 103 | 1.40E-25 | – | |
| ProSitePatterns | 460 | 472 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj1g3v0052330.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v0052330.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.