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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002902
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 140 results. Now displaying 2 of 3 with 50 rows per page. This search has taken 5.691s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj4g3v3112960.1
n.a. PREDICTED: cysteine-rich repeat secretory protein 12-like [Glycine max] gi|356524218|ref|XP_003530728.1| chr4 41469253 41472392 -
3 domain predictions
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Lj5g3v2060920.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Cicer arietinum] gi|502119921|ref|XP_004496784.1| chr5 29825032 29825815 +
3 domain predictions
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Lj5g3v2060930.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Cicer arietinum] gi|502119921|ref|XP_004496784.1| chr5 29830625 29832603 +
3 domain predictions
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Lj5g3v2060950.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|358347887|ref|XP_003637982.1| chr5 29834125 29838154 +
3 domain predictions
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Lj5g3v2060950.2
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Cicer arietinum] gi|502119921|ref|XP_004496784.1| chr5 29834125 29838154 +
3 domain predictions
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Lj5g3v2060970.1
n.a. cysteine-rich receptor-like protein kinase precursor [Glycine max] gi|351723059|ref|NP_001234962.1| chr5 29841046 29844632 +
3 domain predictions
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Lj5g3v2060990.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 25-like isoform 1 [Glycine max] gi|356575777|ref|XP_003556013.1| chr5 29847269 29851230 +
3 domain predictions
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Lj5g3v2061000.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Glycine max] gi|356574378|ref|XP_003555325.1| chr5 29851857 29853722 +
3 domain predictions
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Lj5g3v2062030.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|358347873|ref|XP_003637975.1| chr5 29857663 29861169 +
3 domain predictions
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Lj5g3v2062040.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 29-like [Cicer arietinum] gi|502120126|ref|XP_004496856.1| chr5 29862556 29863603 +
3 domain predictions
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Lj5g3v2063050.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|358347840|ref|XP_003637959.1| chr5 29865872 29866161 +
3 domain predictions
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Lj5g3v2063090.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 29-like [Cicer arietinum] gi|502120126|ref|XP_004496856.1| chr5 29870894 29873021 +
3 domain predictions
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Lj6g3v0061020.1
n.a. PREDICTED: cysteine-rich repeat secretory protein 3-like [Glycine max] gi|356575214|ref|XP_003555737.1| chr6 1022416 1024503 +
3 domain predictions
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Lj6g3v0353760.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 3-like [Glycine max] gi|356537750|ref|XP_003537388.1| chr6 3349791 3355861 +
3 domain predictions
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Lj6g3v0353760.2
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 3-like [Glycine max] gi|356537750|ref|XP_003537388.1| chr6 3350372 3355027 +
3 domain predictions
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Lj6g3v0353780.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 2-like [Cicer arietinum] gi|502129947|ref|XP_004500478.1| chr6 3359961 3369257 +
3 domain predictions
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Lj6g3v0411650.1
n.a. PREDICTED: cysteine-rich repeat secretory protein 60-like [Cicer arietinum] gi|502137564|ref|XP_004503125.1| chr6 3876538 3878957 -
3 domain predictions
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Lj6g3v0411650.2
n.a. PREDICTED: cysteine-rich repeat secretory protein 60-like [Cicer arietinum] gi|502137564|ref|XP_004503125.1| chr6 3876538 3878957 -
3 domain predictions
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Lj6g3v1055620.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Cicer arietinum] gi|502134484|ref|XP_004502136.1| chr6 12126637 12129474 -
3 domain predictions
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Lj6g3v1055620.2
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357462155|ref|XP_003601359.1| chr6 12126637 12129474 -
3 domain predictions
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Lj6g3v2168690.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Glycine max] gi|356549449|ref|XP_003543106.1| chr6 25004733 25006259 +
3 domain predictions
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Lj6g3v2168700.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Glycine max] gi|356549449|ref|XP_003543106.1| chr6 25005025 25005709 +
3 domain predictions
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LotjaGi1g1v0095200.1
n.a. Cysteine-rich repeat secretory protein; TAIR: AT5G37660.2 plasmodesmata-located protein 7; Swiss-Prot: sp|Q0WPN8|CRR60_ARATH Cysteine-rich repeat secretory protein 60; TrEMBL-Plants: tr|A0A1J7GQD2|A0A1J7GQD2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0095200 LjG1.1_chr1 14417720 14421052 -
3 domain predictions
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LotjaGi1g1v0129600.1
n.a. Receptor-like protein kinase; TAIR: AT4G21410.3 cysteine-rich RLK (RECEPTOR-like protein kinase) 29; Swiss-Prot: sp|Q8S9L6|CRK29_ARATH Cysteine-rich receptor-like protein kinase 29; TrEMBL-Plants: tr|G7KDB1|G7KDB1_MEDTR Cysteine-rich receptor-kinase-like protein; Found in the gene: LotjaGi1g1v0129600 LjG1.1_chr1 20774417 20781709 -
3 domain predictions
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LotjaGi1g1v0129700.1
n.a. Receptor-like protein kinase; TAIR: AT4G21410.3 cysteine-rich RLK (RECEPTOR-like protein kinase) 29; Swiss-Prot: sp|Q8GYA4|CRK10_ARATH Cysteine-rich receptor-like protein kinase 10; TrEMBL-Plants: tr|I1NG71|I1NG71_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0129700 LjG1.1_chr1 20788713 20792400 -
3 domain predictions
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LotjaGi1g1v0129800.1
n.a. Receptor-like protein kinase; TAIR: AT4G21410.3 cysteine-rich RLK (RECEPTOR-like protein kinase) 29; Swiss-Prot: sp|Q8S9L6|CRK29_ARATH Cysteine-rich receptor-like protein kinase 29; TrEMBL-Plants: tr|I1NG71|I1NG71_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0129800 LjG1.1_chr1 20801163 20805361 -
3 domain predictions
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LotjaGi1g1v0129900.1
n.a. Receptor-like protein kinase; TAIR: AT4G38830.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 26; Swiss-Prot: sp|Q9T0J1|CRK26_ARATH Cysteine-rich receptor-like protein kinase 26; TrEMBL-Plants: tr|V7BBH0|V7BBH0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0129900 LjG1.1_chr1 20809342 20850258 -
3 domain predictions
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LotjaGi1g1v0129900.2
n.a. Receptor-like protein kinase; TAIR: AT4G21410.3 cysteine-rich RLK (RECEPTOR-like protein kinase) 29; Swiss-Prot: sp|Q8S9L6|CRK29_ARATH Cysteine-rich receptor-like protein kinase 29; TrEMBL-Plants: tr|I1NG71|I1NG71_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0129900 LjG1.1_chr1 20809372 20813251 -
3 domain predictions
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LotjaGi1g1v0129900.4
n.a. Receptor-like protein kinase; TAIR: AT4G21410.3 cysteine-rich RLK (RECEPTOR-like protein kinase) 29; Swiss-Prot: sp|Q8S9L6|CRK29_ARATH Cysteine-rich receptor-like protein kinase 29; TrEMBL-Plants: tr|I1NG61|I1NG61_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0129900 LjG1.1_chr1 20846177 20850496 -
3 domain predictions
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LotjaGi1g1v0129900.5
n.a. Receptor-like protein kinase; TAIR: AT4G21410.3 cysteine-rich RLK (RECEPTOR-like protein kinase) 29; Swiss-Prot: sp|Q8S9L6|CRK29_ARATH Cysteine-rich receptor-like protein kinase 29; TrEMBL-Plants: tr|I1NG61|I1NG61_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0129900 LjG1.1_chr1 20846268 20850437 -
3 domain predictions
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LotjaGi1g1v0130500.1
n.a. Receptor-like protein kinase; TAIR: AT4G21410.3 cysteine-rich RLK (RECEPTOR-like protein kinase) 29; Swiss-Prot: sp|Q8S9L6|CRK29_ARATH Cysteine-rich receptor-like protein kinase 29; TrEMBL-Plants: tr|G7KDB1|G7KDB1_MEDTR Cysteine-rich receptor-kinase-like protein; Found in the gene: LotjaGi1g1v0130500 LjG1.1_chr1 20948629 20954524 -
3 domain predictions
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LotjaGi1g1v0603300.1
n.a. Cysteine-rich repeat secretory protein; TAIR: AT3G60720.1 plasmodesmata-located protein 8; Swiss-Prot: sp|Q6NKQ9|CRR15_ARATH Cysteine-rich repeat secretory protein 15; TrEMBL-Plants: tr|A0A151R5S3|A0A151R5S3_CAJCA Cysteine-rich repeat secretory protein 15; Found in the gene: LotjaGi1g1v0603300 LjG1.1_chr1 114826618 114831005 -
3 domain predictions
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LotjaGi1g1v0603300.2
n.a. Cysteine-rich repeat secretory protein; TAIR: AT3G60720.3 plasmodesmata-located protein 8; Swiss-Prot: sp|Q6NKQ9|CRR15_ARATH Cysteine-rich repeat secretory protein 15; TrEMBL-Plants: tr|A0A151R5S3|A0A151R5S3_CAJCA Cysteine-rich repeat secretory protein 15; Found in the gene: LotjaGi1g1v0603300 LjG1.1_chr1 114826659 114831005 -
3 domain predictions
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LotjaGi1g1v0609600.1
n.a. Kinase, putative; TAIR: AT5G40380.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 42; Swiss-Prot: sp|Q9FNE1|CRK42_ARATH Cysteine-rich receptor-like protein kinase 42; TrEMBL-Plants: tr|A0A0L9U666|A0A0L9U666_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0609600 LjG1.1_chr1 115387421 115391302 +
3 domain predictions
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LotjaGi1g1v0704800.1
n.a. Cysteine-rich repeat secretory protein; TAIR: AT5G43980.1 plasmodesmata-located protein 1; Swiss-Prot: sp|Q8GXV7|CRR56_ARATH Cysteine-rich repeat secretory protein 56; TrEMBL-Plants: tr|I1JP70|I1JP70_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0704800 LjG1.1_chr1 127291507 127294709 -
3 domain predictions
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LotjaGi2g1v0154300.1
n.a. Cysteine-rich receptor-kinase-like protein; TAIR: AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25; Swiss-Prot: sp|Q9M0X5|CRK25_ARATH Cysteine-rich receptor-like protein kinase 25; TrEMBL-Plants: tr|A0A072U9Q5|A0A072U9Q5_MEDTR Cysteine-rich receptor-kinase-like protein; Found in the gene: LotjaGi2g1v0154300 LjG1.1_chr2 55183305 55186469 +
3 domain predictions
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LotjaGi2g1v0154300.2
n.a. Cysteine-rich receptor-kinase-like protein; TAIR: AT4G05200.2 cysteine-rich RLK (RECEPTOR-like protein kinase) 25; Swiss-Prot: sp|Q9M0X5|CRK25_ARATH Cysteine-rich receptor-like protein kinase 25; TrEMBL-Plants: tr|A0A072U9Q5|A0A072U9Q5_MEDTR Cysteine-rich receptor-kinase-like protein; Found in the gene: LotjaGi2g1v0154300 LjG1.1_chr2 55183305 55186469 +
3 domain predictions
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LotjaGi2g1v0154300.3
n.a. Cysteine-rich receptor-kinase-like protein; TAIR: AT4G05200.2 cysteine-rich RLK (RECEPTOR-like protein kinase) 25; Swiss-Prot: sp|Q9M0X5|CRK25_ARATH Cysteine-rich receptor-like protein kinase 25; TrEMBL-Plants: tr|A0A072U9Q5|A0A072U9Q5_MEDTR Cysteine-rich receptor-kinase-like protein; Found in the gene: LotjaGi2g1v0154300 LjG1.1_chr2 55183305 55186469 +
3 domain predictions
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LotjaGi2g1v0154300.4
n.a. Cysteine-rich receptor-kinase-like protein; TAIR: AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25; Swiss-Prot: sp|Q9M0X5|CRK25_ARATH Cysteine-rich receptor-like protein kinase 25; TrEMBL-Plants: tr|K7MIQ1|K7MIQ1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0154300 LjG1.1_chr2 55183378 55186386 +
3 domain predictions
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LotjaGi2g1v0154400.1
n.a. Cysteine-rich receptor-kinase-like protein; TAIR: AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25; Swiss-Prot: sp|Q9M0X5|CRK25_ARATH Cysteine-rich receptor-like protein kinase 25; TrEMBL-Plants: tr|A0A151T438|A0A151T438_CAJCA Cysteine-rich receptor-like protein kinase 10; Found in the gene: LotjaGi2g1v0154400 LjG1.1_chr2 55190800 55194376 +
3 domain predictions
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LotjaGi2g1v0154600.1
n.a. Cysteine-rich receptor-kinase-like protein; TAIR: AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25; Swiss-Prot: sp|Q9M0X5|CRK25_ARATH Cysteine-rich receptor-like protein kinase 25; TrEMBL-Plants: tr|K7LE20|K7LE20_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0154600 LjG1.1_chr2 55234359 55239784 +
3 domain predictions
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LotjaGi2g1v0154600.2
n.a. Cysteine-rich receptor-kinase-like protein; TAIR: AT4G23180.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 10; Swiss-Prot: sp|Q8GYA4|CRK10_ARATH Cysteine-rich receptor-like protein kinase 10; TrEMBL-Plants: tr|K7LE20|K7LE20_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0154600 LjG1.1_chr2 55234359 55253301 +
3 domain predictions
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LotjaGi2g1v0164000_LC.1
n.a. Cysteine-rich receptor-kinase-like protein; TAIR: AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25; Swiss-Prot: sp|Q9M0X5|CRK25_ARATH Cysteine-rich receptor-like protein kinase 25; TrEMBL-Plants: tr|I1NG82|I1NG82_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0164000_LC LjG1.1_chr2 57186560 57187204 -
3 domain predictions
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LotjaGi2g1v0164600.1
n.a. Cysteine-rich receptor-kinase-like protein; TAIR: AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25; Swiss-Prot: sp|Q9M0X5|CRK25_ARATH Cysteine-rich receptor-like protein kinase 25; TrEMBL-Plants: tr|A0A072U9Q5|A0A072U9Q5_MEDTR Cysteine-rich receptor-kinase-like protein; Found in the gene: LotjaGi2g1v0164600 LjG1.1_chr2 57318643 57325930 -
3 domain predictions
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LotjaGi2g1v0164600.2
n.a. Cysteine-rich receptor-kinase-like protein; TAIR: AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25; Swiss-Prot: sp|Q9M0X5|CRK25_ARATH Cysteine-rich receptor-like protein kinase 25; TrEMBL-Plants: tr|K7LE20|K7LE20_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0164600 LjG1.1_chr2 57318643 57325930 -
3 domain predictions
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LotjaGi2g1v0323000.1
n.a. Protein kinase family protein; TAIR: AT1G70520.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 2; Swiss-Prot: sp|Q9CAL3|CRK2_ARATH Cysteine-rich receptor-like protein kinase 2; TrEMBL-Plants: tr|K7K1F9|K7K1F9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0323000 LjG1.1_chr2 79814212 79824535 -
3 domain predictions
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LotjaGi2g1v0323000.2
n.a. Protein kinase family protein; TAIR: AT1G70520.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 2; Swiss-Prot: sp|Q9CAL3|CRK2_ARATH Cysteine-rich receptor-like protein kinase 2; TrEMBL-Plants: tr|K7K1F9|K7K1F9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0323000 LjG1.1_chr2 79817153 79820912 -
3 domain predictions
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LotjaGi2g1v0323200.1
n.a. Kinase, putative; TAIR: AT1G70530.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 3; Swiss-Prot: sp|Q9CAL2|CRK3_ARATH Cysteine-rich receptor-like protein kinase 3; TrEMBL-Plants: tr|I1JC52|I1JC52_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0323200 LjG1.1_chr2 79825100 79828275 -
3 domain predictions
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LotjaGi2g1v0458500.1
n.a. Cysteine-rich receptor-like kinase; TAIR: AT4G23180.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 10; Swiss-Prot: sp|Q8GYA4|CRK10_ARATH Cysteine-rich receptor-like protein kinase 10; TrEMBL-Plants: tr|K7K5K9|K7K5K9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0458500 LjG1.1_chr2 95210033 95213432 +
3 domain predictions
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LotjaGi2g1v0458600.1
n.a. Cysteine-rich receptor-kinase-like protein; TAIR: AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25; Swiss-Prot: sp|Q9M0X5|CRK25_ARATH Cysteine-rich receptor-like protein kinase 25; TrEMBL-Plants: tr|G7K104|G7K104_MEDTR Cysteine-rich receptor-kinase-like protein; Found in the gene: LotjaGi2g1v0458600 LjG1.1_chr2 95215180 95220355 +
3 domain predictions
 –