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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR003166
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.061s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v2017480.1
n.a. General transcription factor IIE subunit [Medicago truncatula] gi|357481679|ref|XP_003611125.1| chr2 30852360 30854929 +
3 domain predictions
1 GO term
Lj4g3v2917640.1
n.a. PREDICTED: general transcription factor IIE subunit 2-like [Glycine max] gi|356513413|ref|XP_003525408.1| chr4 38835298 38839375 +
3 domain predictions
1 GO term
LotjaGi2g1v0432600.1
n.a. Transcription initiation factor IIE subunit beta; TAIR: AT4G20330.1 Transcription initiation factor TFIIE, beta subunit; Swiss-Prot: sp|P79011|T2EB_SCHPO Transcription initiation factor IIE subunit beta; TrEMBL-Plants: tr|I3SF72|I3SF72_LOTJA Transcription initiation factor IIE subunit beta; Found in the gene: LotjaGi2g1v0432600 LjG1.1_chr2 92949035 92955336 +
3 domain predictions
1 GO term
LotjaGi2g1v0432600.2
n.a. Transcription initiation factor IIE subunit beta; TAIR: AT4G20330.1 Transcription initiation factor TFIIE, beta subunit; Swiss-Prot: sp|P79011|T2EB_SCHPO Transcription initiation factor IIE subunit beta; TrEMBL-Plants: tr|I3SF72|I3SF72_LOTJA Transcription initiation factor IIE subunit beta; Found in the gene: LotjaGi2g1v0432600 LjG1.1_chr2 92949464 92951590 +
3 domain predictions
1 GO term
LotjaGi4g1v0423600.1
n.a. Transcription initiation factor IIE subunit beta; TAIR: AT4G20330.1 Transcription initiation factor TFIIE, beta subunit; Swiss-Prot: sp|Q54KJ8|T2EB_DICDI General transcription factor IIE subunit 2; TrEMBL-Plants: tr|A0A072TV28|A0A072TV28_MEDTR Transcription initiation factor TFIIE, beta subunit; Found in the gene: LotjaGi4g1v0423600 LjG1.1_chr4 79862313 79866721 +
3 domain predictions
1 GO term
LotjaGi4g1v0423600.2
n.a. Transcription initiation factor IIE subunit beta; TAIR: AT4G20330.1 Transcription initiation factor TFIIE, beta subunit; Swiss-Prot: sp|Q54KJ8|T2EB_DICDI General transcription factor IIE subunit 2; TrEMBL-Plants: tr|A0A072TV28|A0A072TV28_MEDTR Transcription initiation factor TFIIE, beta subunit; Found in the gene: LotjaGi4g1v0423600 LjG1.1_chr4 79863632 79866277 +
3 domain predictions
1 GO term