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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR003700
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 11 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.293s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0084829.1
n.a. 3-methyl-2-oxobutanoate hydroxymethyltransferase [Medicago truncatula] gi|357504415|ref|XP_003622496.1| chr0 33835674 33839200 -
6 domain predictions
2 GO terms
Lj0g3v0219409.1
n.a. PREDICTED: 3-methyl-2-oxobutanoate hydroxymethyltransferase-like [Glycine max] gi|356522560|ref|XP_003529914.1| chr0 112108793 112109738 -
3 domain predictions
2 GO terms
LotjaGi1g1v0315000.1
n.a. 3-methyl-2-oxobutanoate hydroxymethyltransferase; TAIR: AT3G61530.1 Phosphoenolpyruvate carboxylase family protein; Swiss-Prot: sp|Q9M315|PANB2_ARATH 3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial; TrEMBL-Plants: tr|I1KI28|I1KI28_SOYBN 3-methyl-2-oxobutanoate hydroxymethyltransferase; Found in the gene: LotjaGi1g1v0315000 LjG1.1_chr1 76092710 76099133 +
6 domain predictions
2 GO terms
LotjaGi1g1v0315000.2
n.a. 3-methyl-2-oxobutanoate hydroxymethyltransferase; TAIR: AT3G61530.1 Phosphoenolpyruvate carboxylase family protein; Swiss-Prot: sp|Q9M315|PANB2_ARATH 3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial; TrEMBL-Plants: tr|A0A072TNM1|A0A072TNM1_MEDTR 3-methyl-2-oxobutanoate hydroxymethyltransferase; Found in the gene: LotjaGi1g1v0315000 LjG1.1_chr1 76095557 76097601 +
6 domain predictions
2 GO terms
LotjaGi1g1v0315000.3
n.a. 3-methyl-2-oxobutanoate hydroxymethyltransferase; TAIR: AT3G61530.1 Phosphoenolpyruvate carboxylase family protein; Swiss-Prot: sp|Q9M315|PANB2_ARATH 3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial; TrEMBL-Plants: tr|A0A072TNM1|A0A072TNM1_MEDTR 3-methyl-2-oxobutanoate hydroxymethyltransferase; Found in the gene: LotjaGi1g1v0315000 LjG1.1_chr1 76095578 76097530 +
6 domain predictions
2 GO terms
LotjaGi1g1v0315000.4
n.a. 3-methyl-2-oxobutanoate hydroxymethyltransferase; TAIR: AT3G61530.1 Phosphoenolpyruvate carboxylase family protein; Swiss-Prot: sp|Q9M315|PANB2_ARATH 3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial; TrEMBL-Plants: tr|A0A178VE54|A0A178VE54_ARATH 3-methyl-2-oxobutanoate hydroxymethyltransferase; Found in the gene: LotjaGi1g1v0315000 LjG1.1_chr1 76095752 76096803 +
3 domain predictions
2 GO terms
LotjaGi1g1v0315000.5
n.a. 3-methyl-2-oxobutanoate hydroxymethyltransferase; TAIR: AT3G61530.1 Phosphoenolpyruvate carboxylase family protein; Swiss-Prot: sp|Q9M315|PANB2_ARATH 3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial; TrEMBL-Plants: tr|A0A178VE54|A0A178VE54_ARATH 3-methyl-2-oxobutanoate hydroxymethyltransferase; Found in the gene: LotjaGi1g1v0315000 LjG1.1_chr1 76095884 76096803 +
3 domain predictions
2 GO terms
LotjaGi5g1v0035000.1
n.a. 3-methyl-2-oxobutanoate hydroxymethyltransferase; TAIR: AT3G61530.1 Phosphoenolpyruvate carboxylase family protein; Swiss-Prot: sp|Q9M315|PANB2_ARATH 3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial; TrEMBL-Plants: tr|A0A072TNM1|A0A072TNM1_MEDTR 3-methyl-2-oxobutanoate hydroxymethyltransferase; Found in the gene: LotjaGi5g1v0035000 LjG1.1_chr5 5773482 5782488 +
6 domain predictions
2 GO terms
LotjaGi5g1v0035000.2
n.a. 3-methyl-2-oxobutanoate hydroxymethyltransferase; TAIR: AT3G61530.1 Phosphoenolpyruvate carboxylase family protein; Swiss-Prot: sp|Q9M315|PANB2_ARATH 3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial; TrEMBL-Plants: tr|A0A072TNM1|A0A072TNM1_MEDTR 3-methyl-2-oxobutanoate hydroxymethyltransferase; Found in the gene: LotjaGi5g1v0035000 LjG1.1_chr5 5774835 5780687 +
6 domain predictions
2 GO terms
LotjaGi5g1v0035000.3
n.a. 3-methyl-2-oxobutanoate hydroxymethyltransferase; TAIR: AT3G61530.1 Phosphoenolpyruvate carboxylase family protein; Swiss-Prot: sp|Q9M315|PANB2_ARATH 3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial; TrEMBL-Plants: tr|A0A072TNM1|A0A072TNM1_MEDTR 3-methyl-2-oxobutanoate hydroxymethyltransferase; Found in the gene: LotjaGi5g1v0035000 LjG1.1_chr5 5778053 5779965 +
6 domain predictions
2 GO terms
LotjaGi6g1v0291700_LC.1
n.a. 3-methyl-2-oxobutanoate hydroxymethyltransferase; TAIR: AT3G61530.1 Phosphoenolpyruvate carboxylase family protein; Swiss-Prot: sp|Q9M315|PANB2_ARATH 3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial; TrEMBL-Plants: tr|A0A072TNM1|A0A072TNM1_MEDTR 3-methyl-2-oxobutanoate hydroxymethyltransferase; Found in the gene: LotjaGi6g1v0291700_LC LjG1.1_chr6 61003006 61003514 +
3 domain predictions
2 GO terms