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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR005710
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.417s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0080839.1
n.a. PREDICTED: 40S ribosomal protein S9-2-like [Glycine max] gi|356562820|ref|XP_003549666.1| chr0 31399310 31401049 -
2 domain predictions
3 GO terms
Lj4g3v1635200.1
n.a. PREDICTED: 40S ribosomal protein S9-2-like [Cicer arietinum] gi|502152082|ref|XP_004508755.1| chr4 23997792 23999574 +
2 domain predictions
3 GO terms
LotjaGi1g1v0218000.1
n.a. 30S ribosomal protein S4; TAIR: AT5G39850.1 Ribosomal protein S4; Swiss-Prot: sp|Q9FLF0|RS92_ARATH 40S ribosomal protein S9-2; TrEMBL-Plants: tr|I3T2G7|I3T2G7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0218000 LjG1.1_chr1 48242287 48244998 -
2 domain predictions
3 GO terms
LotjaGi4g1v0249100.1
n.a. 30S ribosomal protein S4; TAIR: AT5G39850.1 Ribosomal protein S4; Swiss-Prot: sp|Q9FLF0|RS92_ARATH 40S ribosomal protein S9-2; TrEMBL-Plants: tr|V7CDF1|V7CDF1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0249100 LjG1.1_chr4 60192487 60206796 +
2 domain predictions
3 GO terms
LotjaGi4g1v0249100.2
n.a. 30S ribosomal protein S4; TAIR: AT5G39850.1 Ribosomal protein S4; Swiss-Prot: sp|Q9FLF0|RS92_ARATH 40S ribosomal protein S9-2; TrEMBL-Plants: tr|V7CDF1|V7CDF1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0249100 LjG1.1_chr4 60204615 60206181 +
2 domain predictions
3 GO terms
LotjaGi4g1v0249100.3
n.a. 30S ribosomal protein S4; TAIR: AT5G39850.1 Ribosomal protein S4; Swiss-Prot: sp|Q9FLF0|RS92_ARATH 40S ribosomal protein S9-2; TrEMBL-Plants: tr|A0A0B2SUR7|A0A0B2SUR7_GLYSO 40S ribosomal protein S9-2; Found in the gene: LotjaGi4g1v0249100 LjG1.1_chr4 60204698 60205278 +
2 domain predictions
3 GO terms