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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR006298
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.764s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0281329.1
n.a. PREDICTED: GTP-binding protein TypA/BipA homolog [Cicer arietinum] gi|502143941|ref|XP_004505523.1| chr0 145851275 145866261 +
3 domain predictions
1 GO term
Lj5g3v0890580.1
n.a. PREDICTED: GTP-binding protein TypA/BipA homolog [Glycine max] gi|356500497|ref|XP_003519068.1| chr5 13167757 13175554 -
2 domain predictions
1 GO term
LotjaGi0g1v0000300.1
n.a. Elongation factor 4; TAIR: AT5G13650.1 elongation factor family protein; Swiss-Prot: sp|P72749|TYPA_SYNY3 GTP-binding protein TypA/BipA homolog; TrEMBL-Plants: tr|A0A0L9TVK2|A0A0L9TVK2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi0g1v0000300 LjG1.1_chr0 1134471 1142062 +
2 domain predictions
1 GO term
LotjaGi3g1v0244900.1
n.a. Elongation factor 4; TAIR: AT2G31060.2 elongation factor family protein; Swiss-Prot: sp|O25225|TYPA_HELPY GTP-binding protein TypA/BipA homolog; TrEMBL-Plants: tr|A0A0S3SB66|A0A0S3SB66_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0244900 LjG1.1_chr3 40006738 40020070 -
3 domain predictions
1 GO term
LotjaGi3g1v0244900.2
n.a. Elongation factor G; TAIR: AT2G31060.1 elongation factor family protein; Swiss-Prot: sp|O25225|TYPA_HELPY GTP-binding protein TypA/BipA homolog; TrEMBL-Plants: tr|A0A151TP89|A0A151TP89_CAJCA GTP-binding protein TypA/BipA isogeny; Found in the gene: LotjaGi3g1v0244900 LjG1.1_chr3 40008356 40017113 -
2 domain predictions
1 GO term