Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0244900 |
| Transcript ID | LotjaGi3g1v0244900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Elongation factor G; TAIR: AT2G31060.1 elongation factor family protein; Swiss-Prot: sp|O25225|TYPA_HELPY GTP-binding protein TypA/BipA homolog; TrEMBL-Plants: tr|A0A151TP89|A0A151TP89_CAJCA GTP-binding protein TypA/BipA isogeny; Found in the gene: LotjaGi3g1v0244900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:40008356..40017113) extracted from Lotus japonicus Gifu genome v1.2.
ATGAAAAAGAAGGGTACAAGCATGGTTCTAATTGATAGTGCTGGAGCTGGCGATATAATTTCAGTTGCTGGCTTGGCAAG TCCATCAATAGGCCATACAGTTTCAACTGTTGAGGTATTTAATTTTTTTTAAATACTCTTGCCTCTTTATCATGGAAATT TAGCTTCATGAAAATGACCATGGCACATTTGATATTGCCTTTACAATCCTTTTTGTTACAAGTATTTTTAAGCCAATAAA CAGATGCGTATAATATTGATACTCTAGAGCGCACGATACTTAATCTACAAAAAATCAGAAATCATATATATATATGTGTG TGTGTGTGTATACACTCTATACATCGTTTAAAACTTTGCTGAAGAAGGATGTTATTGATACCTACACATGAAAATCATGA GCCTATATAATGTATGTTTGGATTTCTGTTGAACTCAACACTTATACACATTGAATTCAGCGTGACAAAATCTTTCTTCT CCATTTGTGCGTTGTGATGTTTGTTTTCCCGTGGTCAAGGCTAGATAGCCAACTCAATGCTATGAGTTTTCTACTAGGTC ATCATCTCTTCTATAGACTTACACGTTAGAAGAGAAGTAAGCTACATAGTATATTTCTCAAACTCTAGGAAATAGTCCAT CAACTTGCGCTTATTTTGCTTTGGGAGAAACATCTCTCGCAATAGAGCATAAATACGATTCAAATTGTCAGACTACCCAT GAATGAAATTTAGAAAATCCCAGAAGTATTTCCCTCTTCATTTTGCAGTGAGTAATAACAGAGCATGTTAGTTTATCAAC AGAGTCAACCCGTAAAGCTAAAATATGTTTATCCCTTGTATCCCCTGGGCATGTCTCTATTAAGTGTCCATCCTTTCCCA AAATTTTCCACTCACTTAATTCTCACTTCTCACTATCCCGTCAAGTTTGATATTAGTGTGTTTGGAAGAAGTGGTCACAA CTTTAGCGACAGAGGCTTTAGAGCTGCCTTTAACCTTTGTCCCAATGTTTTCGTAGACTTTGCTAAGAAATCGACACAAC CCGAATAATGAAGGTTTCTACTTTCTGTAACACTAAAATAAAGAAGAAATCAAAGGTGTACATCTGAATCACATGGCTTC AACTTTGGAACAACACCAAAATATATTGTGACGGGCTTTGGAGCCTCACTTCAGCCTTAGTCTCAATGTTTTCTGCGGTC ATTGCTCAGCAAATGACTCAACCCGAATAAAGGAAAAATTGCATTATCATAGAAAGGAAAATGACGAAACCAGAGTCGTG CACCTGGATTGCACAATTTCAACCTTGGAATGACATTGTAACATTGTTTCACCTCGGACATCATCAAACCACCACGAATT GCTTAAAACGATAAGAATCTTCTCCGAACCTGCTTCGACACCTTGACGTTGCAATAAGCGCAATTTCAGCACCTTGCCAA ATTTTTCAAGATCTGTCAATCATTTTTGTTGACTGTCCAACAGTTTAGTTCTGGTCAACCTTCCTTTGACGCGCCTGGGA GGGTTTTTCCCCCTTGAGTAAGAATGATAGAGAGGGAGGGGTAAACAGTAAAGTGTAATGAGACGATCTGCTAGGTCTAG GTGCAATCACCCTCATACACACACATATATATATATATATATATATTTTTTTTTTACTATGTTGAGAAACTAAAGAATGA AGTACAATGTAGTATAAAGTACGAGTTTCAAGTATGTATGGGCCAAGATCATATACCCTCAATGATCCTATTCTAACATG ATCTAAACTATTAGCAGTATGCAAAGGACATTTTATAGAAGACAGGACTGATGAATGCTAAGCCTATTGATATTCCTATT GCCAAGCTTCAGCCGTGTGAAGGGCATGCCAGTCAAACCTGAACCCATGGGCACCCTCAACTCCGGCCTCGACTTTGACA GGACTGACGAATGCTAAGCCTATTGATATTCCTATGGACCCCAATGCCAAGCTTCGGCCGTGTGAAGGGCATGGTAGTCA AACCGAAAACCATGGGCACCCTCAACTCCAAGCTCGACTTTGACGAAGAAAACCTGCTTTGACTGGATTTTTGTAAAAAC CAATCCCAACCCCAAACCTGAAGAAGCAGGAACGCATATGGATTTAGGGGTGAAAATACCCACCCCAAACCGACCTCGAA CTCGTCCTGATGTGATAATTAAAAATTTGAATTATAATAGTAGTTTAATAGTAATGATCAACTCAATATTGCTTATAACA TGATTTAACTCTTAATGTTCTTACATTTTAATATTCTTGTATATTTTTATGAATTATTTGAATGGCTTAAATATGCTTTA GGTCCCTGAAATTGTAAAGGGAATCAAATTTGGTCATTGGAAAAAATTTCTTTGAAATGTAATCCTTGAATTTTTTTAAA GTCAAATTGGGTCCTTTTGTCGACATGTCATCAATTTTGACTGGTCAACATCCCAGTGGCGAGCCTAGTCAGTTGAGGGA GGCCACATGGACTTTTTTCGCATCAGTTTTAGTCCCTATAAAATTTTTAAATCATATTTTAGTACCTTCTCTTCCACCAC CATCTTCTTCCTCTTCCCCCTTCATCTTCTTCCTCTTCCTCCTTCATCCCTCAAACCCAGAATCTTTCCAGAAATAGAAA ACTAAAACAAAAATATTTTGAATCTCTTTTTTTTCTACCTATTATCCCACTGTCCCACCCAAAAATATGATGGTTAGCGG CTCGGGTTCTGGAGGAAGAAGATGATGGTTTTCTCACTCCCTGCTGAGGGAGAAGAACTGGAAGGAAGAAGAGTTTCTAG AGTAATATTGGGAAATCTGATATTAGATTTAGGGTTAGAATTAATCTGAGTTGTAATTAAAAAAAATTATTTAATCATTG TGTAACATGGAAAATAAAAAAAACCACAGGGAAATGATGACAAGGAAAAATTTGGGCCACATAAGACTGAAACACACTTT TGACCCGATTTGATTAATTTTTTTTTTCAGGGATTACATATCTAAAATTTTTTCCAGGGACCCAATTTGATTCCCTTTAC AATTTCAGGGACCTAAAGCATATTTAAGCCTATTTGAATTGAAATGTGGTTTCTACATGATTTATTTAAAAATATAATTA AGTGAATAAGATTAAATAAAAAAGATTTAAGAACAGCCAAGACGGGTTTCATCACCTAACCCCATGGGGATTGGGTTGAG TATCATTTTATCTCCAAATTCCTTAAACTTTCCGAGGCGGGGATGGACAGAGCAGAACCCGCCCCACTCAGTTGCCATGT CGGGGAGTCACTTACAGATCCAGATTGGGAAACAGAATTATGTCACTGTCACTCATCCATACATCTCCTTTGCAGTCAGT GTGGTAATATCGTCGTGAAAGACATTATACAACTATTTGCATCTTAAGTTATATTAAAAGAGCTTTAGGGAAAACGCTCA TGTATTGTATGAAGACGAAGGTCATACTCCAGTTAAGGGTTATCCAAATGCAGATTGGGAAGACTTTCCTACCAACAGGA GATCCACTTCCAGTTCCAGTTATTACTATTTTTATTTGTGATAATATGAGTTCCTGGGATATAGAAAGAAACATAATGTT GTTGCTAGACCCAATGCGTAGGCATAATAATGAGGCATTACTTCAACCACATGTAAGTTCATCTGGCTCAAACAATTGCT TAAAGAATCGAGGTTTGGGGAAGTTACACAGGTGACACAAATATGTGATAATCAGGATGCTTCACATATGGCCTCAAACA GTCAAATTCAATTCCATGATGAACCAAACACATTGAGATAGATTATCATTTCACGAGAGAGGAGATCTTATCTGGAGACG TTACCACTACTTCGTCAATTTCAAGGATATACTGGCAGATGTCTTCACCAAATCATCCAGACGTTTTTTAATTAGTTATA TATGTAACGAACTTGGTGAATATGATTTATATGCTCTAGACTATGGAGGAGTGTTAAAAATAATATAATTTCAGTAATTA TTAGTTGATTAGGTGTTGTAATTATTGTAACGGTAATCTTTGTATATATGATTCTTAATATATATATATATATATATATA TATATATATATATATATATATATTTTTTTTTTTGGTTACAAATATATATATATGTATATATATATATTCTCTTTTTTGTA ATTGTCTCTCTTTTTTCCCTCTGTTTCAACAATAAGCTCTTGATATTTATGTATTTATATTCAATTTATATATAAACTTA ATGCCTAGAATTTTGAGAATCTTACTAGCAGGTAATTGGTCACTTGAATAACTTATGTTTTTATTTAGGTTATGTCTGCA TTGCCCACAGTTGTGTTGGACCCCCCAACAATTTCCATGACTTTTGGTGTAAATGACTCCCCTTTAGCTGGTCGTGATGG CACTCATGTAAGTTTTTTTTTTTTTTTTTTGTGTACTTGTACCTTCTTTGCTGCCTTCAATTGCTTGTGTAAAATTTTTT GTTTGAGGCTGTCCAAATCCAGACACATACCTGGCACCTTTTTCATCTTTGAAGCTGCATTCTATAGTTTCTCTGTTTCT TGTATATGTTTTGATGTTTGTAATGATTAGATACTCTATTAAGTAAATAGGCTAATGCTGGAATTATTATTAGTTGACTG GGGGAAGAATTGGTGACCGACTGTTGGCTGAATCTGAGACCAACCTTGCTATAAATGTGCTTCCAGGCTTATCAGAAACA TATGAAGTGCAGGGAAGAGGAGAGCTACAGCTGGGTTTGTTCCTATTTCTTGAAATTGCATGATCCTTAGTTCCTTACCA TTATATATATGCAAAAGTGTGCTTATGCAGTTCACTATGGCATGTGTGTTAACAGGTATTTTAATTGAAAATATGAGACG TGAGGGATTTGAGTTATCTGTCTCTCCACCTAAAGTCATGTGAGTTTCTAAGGACTGAAGCTCTGAATTTTTTTTGTCTT GTTTACAGTTTTGACGCAATGTGATTTTCTTGCTCAGCGATAAATATGGGTTTGGCATACTGTTCTATGCTAAGTAATGC TGTAAGCTGTATGTGTTTTGATAAAAAAAAACTTGAATTTTTCAAAGGCAATCACCCTTTAAAAGCTTAAGCTATATGCA TTTAGCTCCTCTAAAGTGAGGAGTGCAATAGAGGATAAAGTGCGGTTTCCACAGTTTGAGACTTTATGACCTTATGGTTT CTTATACATGTGCATCAGTGCATGTATGCATCACAAAGGTTGCCTTGGACTTTGTTTAAAGCATAGTAGTCAATTCCGGA TAGTGGCGTGTAGTGGCCGACCCCAAAAGTGGGATAGCGGGATGGCCGCTATTCTGATTTTTCATATATACATATAATTA CTAAAAAATGATAAATATAACTTAAAATTCATAACATGATGAAATGATAGAGAAGAGAGGAGGAGGATGCCCTGCTGGAA GAGGAGAGAACTGAAGGGTAACAAAATGAAATGATTGAGAATAGAAAAATAAAGAGGAAAGGAAAGGAAAGAAAAATAGA GGAATAGAAAAATAAAAAAAGCAGAGCAGAACAGAGGCCAAAGGGAAACAGGGGCAGTGGTCGCCGGAGATAGGCTGAAA GCCACTGCACTGTTCGCTGGAAGTTGGACGGTACTGTCGGAGGTCGGGTTGTGGCCATGGGTACTGATCGACGGTGGCTG AAGGAGGTCGCACAATGACCATGGGTTCTGGTCGCAGAAGAAAGAAGATGAATAGTGAGATGAAACGCACGTTTCATTTA TTCAGAAGCGAAGTCCCAAAACTACCCTCAAAGTTTAACATAATTGTAAAATTTCAAGGGCAATTTAGGTTTTTCTGCGA GTTCCCCTTCTCTTCTCCCTGTCGCGTCGCGATCTGGTGCGATTGGCTACGATTTTGGCCGCGAATCGCGCCGCTCCAGC CGCGACGGTGATCCGCGACACGATTGTTCGGGGAGGGGCCGCGACGCGGCACGATTGACCACTATGGTTTAAAATGCATC CCCTTACTTTAGGGGTGGTAAATCCAAGATGAGCTATTTCCAACGCATTCCCTAACCAAAGAGTTCTTTGGGCCTGAACT GTAGGGTTGGAAACACAAATCAGGATTGTTTCATATGATCCTATGAAGAAGATCGCAATTTTATATAACATGATGGGAAA TGCACAAGTCCATTTATCATGCACTAAAATTAATTTGTCAAAATAGCATGTCAGTAATCTATTTTCTTGTTAATCTGTTA AGTTGGAGCCTGAGGATTAGGTTGATATCTGTAACAGAAATTATTGGGAAAGATAGAAAAAGACGAGAGAAATAGGAGTA GACTTATATAAAACATCAACCTAGAATATGACACTACTATTTTAAGGTCTAGTAAAAACAAGCAAATAACACTTATAATA TAATAAAACTTCTAAAATAATAAGATTCTAATAACATGCAAAAGTTCAGGAATTAACAATAAGCACATCACTTGTGTCTC CCGGTATGGTTCATTAACATTCATGCCGCATGTAACATTACATCAATTAGATCCTGAAAGGTCTACCAATGTAAAATGTT TGATCTGGCTAAATTCTCTTCAGTCTTCGCTGATTGATGTTTCAGTGATTTGATTTCCAAATTATATATAATACATTCTT TAAGCCCTCATTCCCCCCACTTTTTTTTTTTTACTTATATTCTGTTTTAATGTACTTCTGCTATGGATTTATTAGGTATA AAACAGAAAAGGGTCAGAAACTTGAGCCAGTAGAAGAAGTTACAATTGAGGTAATAATTCAATTTGATATTCATATTATG CTTGTCCATGAGTTTGGACCTCTAACATCAGGATGGATCTCACAGGTAAATGATGAGCATGTTGGCTTGGTAATGGAGGC CTTGTCTCACAGACGAGCTGAGATTACAGACATGGGACCTGTATCGGGAACTGTTGGTCGAACTAGATTGTCTTTGACTT GTCCATCTAGGTTAGCTTAGTTGTCTCTTTCCCCCTCTGTCCATAAAATGATCTTAATTTTATATTGTATTATTACATTC AGTATTTACATTCTAAGATTTTTTTCTTCTTATTACCTTTTGTCTCTTCTCTTGCCATCCCAGTGGTTTTCTTAAATTAC CTTGAGATAGCTAGGAAAGAGAATCAGGGGAATGAATTACGCAATTACTGAATAAGTACCTCTTCAATAATTGGATGTCA GTTAAATACTTAATCTAATTTTTCCATAGTTCTTCTCACTTAATAATAGCCTGAAGGACATATATCTTATCGACTCAGTT CAGATTTCTGGATTACTGTTAGATCCCATAGAGCTAATTGAGTAATTTGAGCTTCTGGAATTTAACCAATGTCATTAATC ATCTTATATCACCATCTGTTGGAATATAACTTCTTTGGTGTTAGATAGTGAAATCAGATGTGAATCAAATCTAGTAACTT CTTCAATTCTATTTGTTCAGGGGCCTGGTTGGTTATCGGAGTGTGTTCAGCAGTGACACACGTGGAACTGGGTTCATGCA TCGTGCTTTCCTTGGTATGTTCCTCAGCTAAAATTCTCTTTTTCTTCCAACTAGCATGTAAAGATACCAATTTCAGTTTG TTTGCTATATGTCTTGCAAATCATGGTTTTCAGTTGCCCTCATGATTTAAGTTTTGCTTACTTTATGTTGGTGAATCTCT GTGCTTGCTTACTTTACCAACTTATGCACATTGTAATTTTGCAGAATATGAAAAATATCGAGGCCCTCTTGGCAATGTTA GGAAAGGAGTATTGGTATGTTTGTCTGCTGCTTTCCCTACTTATAAGGGCTTAACAATACCTAGTTACTGCTTTCCATGA ACTTGTTTCAATTCACATAGCATGTTTTGAGTGTGACTTTATTTCATTTTTTAAACTTGTTCTTACTCAATGTTCTTTAC TTAATTGAACAGGTGTCTATGGGTTTTGGCACAGTCACAGCTCATGCATTGATGAGCTTAGAAGCTCGAGGGACTCTTTT TGTAGCCCCTGGAATGGATGTAGGATAACTACTAATGTCTCTCTCAATTTTAATTTCACCGCTATGCATTCATTGAATGT TTATTCAAGATGACTTTCTGATAGGAAGCGCTGAGTCCCATGCCATGTGTTTTACTTGCTTACAGCTTATTTGAAATGAG GAATTATATGATATTTACTCCATGGATTGCCTCAATTGCTTTTGTCCACGTACTTGTGTGAAATATTTTCTGTATTGTCC TCATATGTATAAGGGCGGTTGTCTGTACCAAAAAAAAGGCAATTGTATCCGCTAAAGAATTTCAAGTTGAACACTTTTTT GCTATTAATATATCCATGAATTTTCTTACTGAACACAAGTAGGGTTTTGATGGTCAAATTGTGGTCAAACATTTATATGT TCATGGTCTTCCATCTAGTTTTTGCTTATATTGTACGTTTTAAGTTTCTCGTACACACTGCCTGAAAACTTCTTATTCTT TGGTTTACAGGCCTATGATGGAATGATTGTTGGAGAACATTCACGAGAAACAGATCTTGATGTAAGGAGGATAATTTTTA GCCTGAATGCAAGTTTTATGTCAAAGTTGGTCACTCTTTAACAAAGACTATGATATTGCAGGTCAATCCAGTTAGATCTA AAGAACTCACAAATATTCGTGCTGCTTCCAAGGATGAGAATGTGAAGCTGACTCCTCCTCGCCTTGTATGTATTTATGTG CACTATGCTCTTAAATCTTGCTCATTTTAGACAAGTGA
CDS sequence (LotjaGi3g1v0244900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAAAGAAGGGTACAAGCATGGTTCTAATTGATAGTGCTGGAGCTGGCGATATAATTTCAGTTGCTGGCTTGGCAAG TCCATCAATAGGCCATACAGTTTCAACTGTTGAGGTTATGTCTGCATTGCCCACAGTTGTGTTGGACCCCCCAACAATTT CCATGACTTTTGGTGTAAATGACTCCCCTTTAGCTGGTCGTGATGGCACTCATTTGACTGGGGGAAGAATTGGTGACCGA CTGTTGGCTGAATCTGAGACCAACCTTGCTATAAATGTGCTTCCAGGCTTATCAGAAACATATGAAGTGCAGGGAAGAGG AGAGCTACAGCTGGGTATTTTAATTGAAAATATGAGACGTGAGGGATTTGAGTTATCTGTCTCTCCACCTAAAGTCATGT ATAAAACAGAAAAGGGTCAGAAACTTGAGCCAGTAGAAGAAGTTACAATTGAGGTAAATGATGAGCATGTTGGCTTGGTA ATGGAGGCCTTGTCTCACAGACGAGCTGAGATTACAGACATGGGACCTGTATCGGGAACTGTTGGTCGAACTAGATTGTC TTTGACTTGTCCATCTAGGGGCCTGGTTGGTTATCGGAGTGTGTTCAGCAGTGACACACGTGGAACTGGGTTCATGCATC GTGCTTTCCTTGAATATGAAAAATATCGAGGCCCTCTTGGCAATGTTAGGAAAGGAGTATTGGTGTCTATGGGTTTTGGC ACAGTCACAGCTCATGCATTGATGAGCTTAGAAGCTCGAGGGACTCTTTTTGTAGCCCCTGGAATGGATGCCTATGATGG AATGATTGTTGGAGAACATTCACGAGAAACAGATCTTGATGTCAATCCAGTTAGATCTAAAGAACTCACAAATATTCGTG CTGCTTCCAAGGATGAGAATGTGAAGCTGACTCCTCCTCGCCTTGTATGTATTTATGTGCACTATGCTCTTAAATCTTGC TCATTTTAG
Protein sequence (LotjaGi3g1v0244900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKKKGTSMVLIDSAGAGDIISVAGLASPSIGHTVSTVEVMSALPTVVLDPPTISMTFGVNDSPLAGRDGTHLTGGRIGDR LLAESETNLAINVLPGLSETYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTEKGQKLEPVEEVTIEVNDEHVGLV MEALSHRRAEITDMGPVSGTVGRTRLSLTCPSRGLVGYRSVFSSDTRGTGFMHRAFLEYEKYRGPLGNVRKGVLVSMGFG TVTAHALMSLEARGTLFVAPGMDAYDGMIVGEHSRETDLDVNPVRSKELTNIRAASKDENVKLTPPRLVCIYVHYALKSC SF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 309 | 309 | 3.5E-138 | – | |
| Gene3D | 1 | 45 | 45 | 3.4E-8 | – | |
| PANTHER | 1 | 309 | 309 | 3.5E-138 | ||
| Gene3D | 47 | 133 | 87 | 2.9E-32 | – | |
| SUPERFAMILY | 49 | 132 | 84 | 1.87E-9 | ||
| CDD | 51 | 128 | 78 | 2.88908E-39 | – | |
| Gene3D | 134 | 228 | 95 | 5.8E-35 | – | |
| Pfam | 141 | 224 | 84 | 2.0E-19 | ||
| SUPERFAMILY | 143 | 258 | 116 | 7.67E-23 | ||
| CDD | 143 | 223 | 81 | 6.36116E-37 | ||
| Gene3D | 229 | 316 | 88 | 4.1E-31 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi3g1v0244900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…