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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0281329 |
| Transcript ID | Lj0g3v0281329.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: GTP-binding protein TypA/BipA homolog [Cicer arietinum] gi|502143941|ref|XP_004505523.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 50 | 50 | – | – | |
| SignalP | 1 | 43 | 43 | – | – | |
| Phobius | 1 | 34 | 34 | – | – | |
| Phobius | 35 | 45 | 11 | – | – | |
| PANTHER | 41 | 223 | 183 | 8.20E-271 | – | |
| PANTHER | 41 | 223 | 183 | 8.20E-271 | ||
| Phobius | 46 | 50 | 5 | – | – | |
| Phobius | 51 | 666 | 616 | – | – | |
| SUPERFAMILY | 54 | 263 | 210 | 1.23E-54 | ||
| Gene3D | 55 | 262 | 208 | 1.50E-60 | ||
| ProSiteProfiles | 56 | 254 | 199 | 51.515 | ||
| Pfam | 57 | 251 | 195 | 8.40E-51 | – | |
| CDD | 58 | 253 | 196 | 4.26E-101 | – | |
| TIGRFAM | 58 | 658 | 601 | 9.00E-255 | ||
| TIGRFAM | 59 | 198 | 140 | 1.00E-18 | ||
| PRINTS | 60 | 73 | 14 | 2.90E-14 | ||
| ProSitePatterns | 93 | 108 | 16 | – | ||
| PRINTS | 100 | 108 | 9 | 2.90E-14 | ||
| PRINTS | 120 | 130 | 11 | 2.90E-14 | ||
| PRINTS | 136 | 147 | 12 | 2.90E-14 | ||
| PRINTS | 172 | 181 | 10 | 2.90E-14 | ||
| SUPERFAMILY | 203 | 358 | 156 | 1.68E-26 | ||
| PANTHER | 240 | 653 | 414 | 8.20E-271 | ||
| PANTHER | 240 | 653 | 414 | 8.20E-271 | – | |
| CDD | 261 | 348 | 88 | 2.88E-28 | – | |
| Gene3D | 263 | 360 | 98 | 9.70E-19 | – | |
| Pfam | 275 | 348 | 74 | 2.00E-08 | ||
| Gene3D | 363 | 459 | 97 | 5.20E-28 | – | |
| SUPERFAMILY | 363 | 446 | 84 | 6.26E-09 | ||
| Pfam | 455 | 538 | 84 | 6.60E-19 | ||
| SUPERFAMILY | 457 | 572 | 116 | 2.88E-22 | ||
| CDD | 457 | 537 | 81 | 5.40E-35 | – | |
| Gene3D | 460 | 538 | 79 | 3.00E-26 | ||
| Gene3D | 544 | 637 | 94 | 1.20E-35 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of Lj0g3v0281329.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0281329.1, powered by CORGI.
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