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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR006560
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 13 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.827s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0241779.1
n.a. ASH1-like protein [Phaseolus vulgaris] gi|342209884|gb|AEL16989.1| chr0 125480301 125486508 -
3 domain predictions
2 GO terms
Lj1g3v0887590.1
n.a. PREDICTED: histone-lysine N-methyltransferase ASHH2-like [Glycine max] gi|356507632|ref|XP_003522568.1| chr1 11315183 11328722 +
3 domain predictions
2 GO terms
Lj1g3v0887590.2
n.a. PREDICTED: histone-lysine N-methyltransferase ASHH2-like [Glycine max] gi|356507632|ref|XP_003522568.1| chr1 11316000 11328722 +
3 domain predictions
2 GO terms
Lj2g3v0523280.1
n.a. PREDICTED: histone-lysine N-methyltransferase ASHH3-like [Glycine max] gi|356530969|ref|XP_003534051.1| chr2 6971562 6982866 +
3 domain predictions
2 GO terms
Lj6g3v1048900.1
n.a. PREDICTED: histone-lysine N-methyltransferase ASHR3-like [Glycine max] gi|356514491|ref|XP_003525939.1| chr6 11815461 11820333 +
2 domain predictions
2 GO terms
Lj6g3v1048900.2
n.a. PREDICTED: histone-lysine N-methyltransferase ASHR3-like, partial [Cucumis sativus] gi|449530608|ref|XP_004172286.1| chr6 11817674 11820333 +
2 domain predictions
2 GO terms
LotjaGi1g1v0267000.1
n.a. histone-lysine N-methyltransferase; TAIR: AT1G77300.1 histone-lysine N-methyltransferase; Swiss-Prot: sp|Q2LAE1|ASHH2_ARATH Histone-lysine N-methyltransferase ASHH2; TrEMBL-Plants: tr|A0A0B2SJ73|A0A0B2SJ73_GLYSO Histone-lysine N-methyltransferase ASHH2; Found in the gene: LotjaGi1g1v0267000 LjG1.1_chr1 65255375 65270570 +
4 domain predictions
2 GO terms
LotjaGi1g1v0267000.2
n.a. histone-lysine N-methyltransferase; TAIR: AT1G77300.1 histone-lysine N-methyltransferase; Swiss-Prot: sp|Q2LAE1|ASHH2_ARATH Histone-lysine N-methyltransferase ASHH2; TrEMBL-Plants: tr|A0A0B2SJ73|A0A0B2SJ73_GLYSO Histone-lysine N-methyltransferase ASHH2; Found in the gene: LotjaGi1g1v0267000 LjG1.1_chr1 65255375 65270570 +
4 domain predictions
2 GO terms
LotjaGi1g1v0267000.3
n.a. histone-lysine N-methyltransferase; TAIR: AT1G77300.1 histone-lysine N-methyltransferase; Swiss-Prot: sp|Q2LAE1|ASHH2_ARATH Histone-lysine N-methyltransferase ASHH2; TrEMBL-Plants: tr|A0A0B2SJ73|A0A0B2SJ73_GLYSO Histone-lysine N-methyltransferase ASHH2; Found in the gene: LotjaGi1g1v0267000 LjG1.1_chr1 65255427 65268351 +
4 domain predictions
2 GO terms
LotjaGi2g1v0165900.1
n.a. Histone-lysine N-methyltransferase; TAIR: AT2G44150.1 histone-lysine N-methyltransferase ASHH3; Swiss-Prot: sp|Q945S8|ASHH3_ARATH Histone-lysine N-methyltransferase ASHH3; TrEMBL-Plants: tr|A0A0B2NX70|A0A0B2NX70_GLYSO Histone-lysine N-methyltransferase ASHH3; Found in the gene: LotjaGi2g1v0165900 LjG1.1_chr2 57585729 57597709 +
3 domain predictions
2 GO terms
LotjaGi2g1v0165900.2
n.a. Histone-lysine N-methyltransferase; TAIR: AT2G44150.1 histone-lysine N-methyltransferase ASHH3; Swiss-Prot: sp|Q945S8|ASHH3_ARATH Histone-lysine N-methyltransferase ASHH3; TrEMBL-Plants: tr|A0A0B2NX70|A0A0B2NX70_GLYSO Histone-lysine N-methyltransferase ASHH3; Found in the gene: LotjaGi2g1v0165900 LjG1.1_chr2 57585743 57597610 +
3 domain predictions
2 GO terms
LotjaGi5g1v0288900.1
n.a. Histone-lysine N-methyltransferase; TAIR: AT1G76710.1 SET domain group 26; Swiss-Prot: sp|Q84WW6|ASHH1_ARATH Histone-lysine N-methyltransferase ASHH1; TrEMBL-Plants: tr|A0A0S3SND2|A0A0S3SND2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0288900 LjG1.1_chr5 60557303 60564179 -
4 domain predictions
2 GO terms
LotjaGi6g1v0199300.1
n.a. Histone-lysine N-methyltransferase; TAIR: AT4G30860.1 SET domain group 4; Swiss-Prot: sp|Q949T8|ASHR3_ARATH Histone-lysine N-methyltransferase ASHR3; TrEMBL-Plants: tr|A0A0L9UBQ6|A0A0L9UBQ6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0199300 LjG1.1_chr6 49604942 49609813 -
2 domain predictions
2 GO terms