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LotjaGi5g1v0288900.1

Overview

Field Value
Gene ID LotjaGi5g1v0288900
Transcript ID LotjaGi5g1v0288900.1
Lotus japonicus genome version Gifu v1.2
Description Histone-lysine N-methyltransferase; TAIR: AT1G76710.1 SET domain group 26; Swiss-Prot: sp|Q84WW6|ASHH1_ARATH Histone-lysine N-methyltransferase ASHH1; TrEMBL-Plants: tr|A0A0S3SND2|A0A0S3SND2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0288900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:60557303..60564179) extracted from Lotus japonicus Gifu genome v1.2.

ATGAATATATTTGTACCATAATTTTTTTTTAATAATTAAAGAAATAAAAGAAAATTAAATCAACATAAAAAGAAAAGGAA AAAAAAAACTAAACAAGTGCAGTGGCCTAGACCTCCACACGACGGTGGCCGCTACAAGGCTCCTCTCTCTTTCGACGGGG AACAACATCTCTGCATACCTAGTTTTCGGACAAAGGTTTCACCTTTTCCTCAATTTTTGCAATCTTAATTTACCATGTAG TTGTCACTGTTAGATTCGTCACTCTCATTATTCCCTAGCTAGGTTTTTGTAAAATCTATTTCAATTGAATTCTTCGTTGC CACTAACACTGCGTTATTATCAGCAGATTCACACTCTCAACCATTCATTACCCACATGGTAATTCTTTTTCTCTTCCAAA ATCATTGTTCAATGTATTGTGTGTTTGAGTTGAATAACAATGACATTATTATTACTCTCAAGGATCCTGCTGCTGCTGCT GAAGAATTACCTCCATATATTCATATAACTCAGAATGATTTTTTTACGCGAAGGTTCGTAAGTCGTAATTGAACTTGCTA TGTTACTTACTAGTTATATTAATTTAATTGACCTTGTCTTTGTTTTTGTCTAGGCATAAGAAACAGAAGGAGGAGGATAT TGCTATATGTGAATGCAGGTATAACTCTGATGACCCCGATAGTGCGTGTGGGGATAGGTGCCTGAATGTGTTAACCAGCT CTGAATGCACCCCTGGTTATTGCCCTTGTGGTATCTTTTGCAAAAATCAGGTGAATTCATATTTAGGTCTGTGTGTGATG ATCATATAGTTGTTATATATTATATAAGTTAATATTCAGTTGTTAATTGCGACTTTGCGAGATTTAAAGATACGGTTTTT TTGCTTACTATAACTACCCTCTAGGCAGTGGAAAGTTGATCATTGAGAAGTTATTACTTATTAGCTCCAACTTATGTTTC TGTGGGCGTTGCGTGTTTATGCTCTACTTCCACGGTTTTTTTCTTTTTTCATAATTTTTTTGGCTCCTGGTTTCTCCGTA CGTCACAGTTTAGTGTAGAGGTTGTCACGGCCGTTAAAGTGATGGAAATAGTGACCGTGATGGCACTATTTAACTGCTAT TTGGTGGGACTAACAAAAACCCAAAAATGCTCTCAAGAAGTTAATGCATGGGCATTTTGGGGGTATTGTAGGGTTGTTAC TTTGGAAACTAATGAAAAGGGTTTTGTTTGAAGAGGATGAGGAGGAAGAGATCTACACTTGTGATAGTAGTGAAAATGAT AAAGAGGAAGACTGGTTTCTAGCAGAGGATGACCGATGACTTGTATTTAGGAAACTTTTACTTGGATTTTCGTGTTTTTA GTCAGTCTAGTTTTAGTCTTAGAGGCTAAAACTTCTTTGTTACCTTGACTTTTGTTGGTATTTACTTGTATTTTTTGTTT AAGACACCTATGGTTTTTTATTGTTAATTATGAATGAATGTCGTAAATTTTGAATATTTTTTTGTAAAAGTTCAGCATAG CAGCCATCTCGCAATAAATTTTTTGGTGTTGGCTGCTATCCGGATTGATATCAATGTGTAGAATGCTAGAATGTCCTACT TGAACTTTTCTGTGTCATTTTTTTTCCAAACCTTTGACCTATTTTACTTAGGGTGAAGCTAAAATCAATTCATATATTTA TGTTTCATATGTCATGGTTGCAGAAATTTCAGAAGTGTGAATATGCTAAAACAAAGTTGTTCAAAACTGAAGGCCGGGGG TGGGGTCTTTTGGCTGATGAGGACATTAAGGTAAACATATAATGAATTGCCATGAAATTTGGAAAAAAGGAACTTTCTTA CCAAAATTGATGCATGTCATTGCATTTGCTGCTTTATAATGGAGATGGTTAATTTTTTAGTAATTTCTTTTGTGCAATAG TGCCGCACTTCAACTTTTTTCTTTCATACAGGAAGGACAATTTGTCATTGAATACTGTGGAGAAGTAATATCGTGGAAAG AAGCCAAGCGTAGATCGCATGCTTATGAAGTTCAAGGTCAAATGTCAATTCAATATTTCTATTTGACAAGTATTTAATTT TATGTTTTTGTAAAACTTACGTGTTCTTTGCAGGTCTTAAGGATGCATTTATTATTTGCCTAAATGCATCTGAATCTATT GATGCAACACGGAAAGGAAGCCTTGCGAGATTTATTAATCATTCCTGGTAAATCGCTTCAAAAATGCTAAAATTAAGTAG AATGCTAGTATGCAGGTTTTGTTATTCTCCTTGTTTCCTACTACACAAGGTTTGACATCAATAGTATACTTTTAAGTTTG CAGTCAACCAAACTGTGAGACAAGAAAATGGAATGTCTTGGGTGAAACAAGAGTTGGCATATTTGCAAAGCATGATATTT CAATTGGAACTGAATTGGCATATGACTATAATTTTGAATGGTTTGGAGGTGCAAAGGTTCGCTGCCTCTGTGGTGCAGTC AAATGTTCTGGATTCCTTGGAGCAAAATCTCGCGGTTTTCAGGTAAATTTTGAGCAACTAAAGTAGTAGTAACCTCAAAA AGATCAGTGCTTGATTTTGTTAGGATCAGTGTAGTCAGAAGCGCTTTTTGAAGCGCTAGAGCGTGCTTGAGGTAGCTCTG CGCTTCAAAGCGCGACTAAAGCGAGAATCAGCAGAAGCGTGGCAGAAGCGCGATTTTGAAGCTTCTGCGCTTCAGCCAGG TTCGCTTGTTTCCGGGTTTTTTGACCCGTTTTGACCCGTTTTGCTAAAATTAGGGATTTTAAACCTAATTTTCAATTGTT CCTCTTCTATCTTGAGCCCCTCTCTCACGATTTTGAAGCTTCTGGCTCTCTCACGATTCTGTGTTGTTCTGTTGCCGTCT GTGCAGCCGCCGCTGCCGCCGGCGACTCAATTTGCAGGGTTGTTCCTCTTCGACCCTGTCTCTCTCTCTCTCTGTTGTTC AAAACTTCTGTTGTTTGTCAAATCTTCTACTATTTCTTCCTTCGACTATGTCTCTCTGTTCTCTTGTTCGAAACTTTAAG AGCACCTCTCTCTGTTCTCTCTTTGTGAAATGGGTTACTAAGAGCAATGGTTTTGTCACTGTTCGAATGGGTTAATGAAC ACCTCTCTCTGTTCTCTCTTTGTAAAATAGCTATAATATTCCTCTGTGCTCTAAACTATAAGCTATAAGTTGTAGTTTAT AGTGTCTTATAGCTTATTTTACCATCTCAGAATTATGATATTGATGCCAATTATACCATTTATATGCATATAAATATTTA TAAGTGTAAATATATATAATATATATATAACTGGCAAAAGCGGCTAAAGCCTACGCTTTAGCGCTTTTGGACCCTCCACG CTTTCTTGCTAAATCCCGCTTCTGACTACCTTGGTTAGGATGCAATTGTAAGGTATGGGAATTGAGTCCCACATTAGAAG TGTGAGATTTTGGTGTGGGGTTTATAAGGCCTTGGGCTCTATAACTACAACGGCTAGCTTTTGTGGTATTGTTCTCCCAA GGTTCTTATCAAAATTTGTATTTTTCAAGCATCTTAATGAAATTTTGTATTGGTTTAGCATTTGAAATGCATAGACATGG TGTTGGTTGTTGTAAACAATGAGGATTTAAGTCTCAACAATAGCTTGAAAGGTGACGATAAGTGCTACTTTTTGATATTT TGATTGATTATGATTGAATATTAAATAATTCTGAAAAATAAAAATGTAATTAGTAGAGGTTTATTAAGGAGGCAGGCTCT TATTTATTTGATTTGATCATATAAGTTTTGTTATAGTGGAATGTGTGCACAAATTATCAATTGGGGAAAGATCTAGCAGT TGTAATAATAGGAAGTACCACCAATGGGTGGTTGGTTCGAGCGGTACATGGTACATGCTTGGTTCCCCTTAAGCAATGTC TCAGGTCGAGTCATGTGTATGGGAAAAAAACCACTGGAAGAGCCAGCCCCACCAAGATGTGGATGTTCCCGGCTTGAACA TGTTCTGAGGAGGATTCTTGTGTTCAAACCAAATTAAATAAAATAGTAAGAAGTACCTTGCTGTGTCCCTGTTCTGGGAT TTCGTATTGCTTTTTTCAGCTTAACTTTTATTTGTCTGTTCTTTTTTCTTTGATTATTATTGGTTTTTTAATCATCTAAT TTTTCTGCATGTTGGGTAAACTCTGTTCAGGAGGATACTTATCTATGGGAAGATGATGATGACAGGTAATTTATAATTTA TCCTTTTTCTTCTGATGCATTCTTCTCAAAATTACAGCTTTCACTTTCCCTGTAGATCATCTGCCAGACACCACTTGAAA TGAGCAAACTTCAAATTATTCAGCATTGAATATGTGGCACCTTGAACTAGTATCATCATTTTGAAATTTCAAATACAAAT ATCCTTCTTTTAAGTGTTTGAAACGTGGCTAACTGGTTTTACACCTGAAACTAGTGTCATCATTTGAAATTTCAAATACA AATACCCTTTTTTATAAGTGTTTGAAACGTGGCTAACTGGTTTATCTACTGATTCCATTTGAGGGTCAGCATTGTAGCCA CTGTAAGATTGCTGTGTAGATGTATATCGCACCCTTCTCCTTTCCTGGACCCCACAATGATGAGAGCCTCAATGCCTCAT GCACTAGGTTGCTTTTAGTGACTTGTGGGCTTGTGGCCATTCCTAGTTTTTAATTTATTATGGAATATATGGTCTTCAGA CTTCAAACTTCACTTGTTAAGATTGGGTCCCTTTTTCTATCAGTGAATATATGGTTGTTTTTAACATTTTGGCTAGGTGA GGCCGGTATACATTTTGTTCAAATGCTTCCAATTACCAACTCTTTCCTTCTTAATGTGTTATAGTTCTGACTTCTGAGGT GAAAATGAAACTTAGAATTAAGGGACAAAGAGTGTATTTTTTTCTTCCTTGTTATTCAGTATTAAATTTGAAAGGAAGAT GTTTGATAGAATCTGTCCCCTATTTGTATTTGAGGAACTTCTGCTTGGGAAAAAGGTAGATTTGATACAATTTATGTGGG TGTATGCATTTTATTTTATGATAACCTTCTCTGTATAAAGTCCAGAGAACCTTTTTTCATCACATCAATAATGTGATTGC TTAGAAACAAACCCAGACATGATGCACTTGCTTCAATTGCTTTTTCTAATGATGTTTTGGTTCATTAATTTTTGTTTATG GTATTTGGGTACAGGTACTCTGTTGAGAAAATTCCTGTATATGACTCTGCAGAGGATGAAGTGATGTCGGATGTTAATGG ACAAACTGCACATTCCATGGATGTTATGCCTAAAGCTGAGCAGTTATCGGAGTCCTCGGATGTTCAGCTGATTGATTCAG TTCAGATGAACGGTTTAGATGTCAAGAAGATTAAAACTGATGTAGCAGGTGAAGATATGAAGTTGTACTCCATAGATACC GAGCCGGCCCTTGAGCAAAAAAATGCGATGATATCACGTATCCGAAGTAATGCTGCAGGCAGAAACTATTCCATTGGACC TAGGTCCATGTCTACCAAAAGATCGAAGGCATATAATGGGGGAAAGTTTAAAAACATCATTAAGAAGAAAGTTGATGTAA AGTTTGCAGTTGGCCTCTTAACATCAAAGGAAGCACAAGAGGAGATTTTAGATTCTGAGGTATGACTTTTTTAGTATTCC CTTTTTTCCTTGAGTGCTGATTGCTCAGTATTATCACCTGGCTTTCTTTCAATTTTGTTATCAGTGGGGTAAATCTAGTT AGCAAGGTATTTCAACTTGCAAAGATAGCTTTAGTATTATGATTTTGCATTCATCTCTTATTTAAATTTTTTCGTTCACG CAGAGAAGAAAAACCGATGCTACATCTGGTCTTGATTCCTTATACAACGAAATACGGCCCGCCATCGAAGAACATGAGAG GGATAGCCAAGACAGTGTATCTACGACAGTTGCAGAGAAGTGGATACAGGCTTGCTGCCTAAAATTGAAGGCGGAGTTTG ACCTTTACTCGGCAATCGTCAAAAATGTTGCTTGCACTGCTCAAGGGGTACCTGGCCAAGCAAAACCTACTGAAGTAGAT AATGAAAACGAAATCAAGCTTTTGACAGATTGAAATCTGATCACATGTTTTCCCCCCTCGTGTAACTCATGATTCACAAA ATACATGGAAGCTTTAGAAATTTCCTTCGGAAAATTCATAGCAGAGAGATTCTAAAACTTGGTGAAAAAGAAAAATTCAT TTATTATTTGTAACCCCATGTTCGTCTTGGTTTAAACCAAAAAGCAAACACACAAACAGACAAAATCCCGATTGTGATAA TCAAGAGCGAGCCAAGTCCCAGTCCCACATTGATAGATTAAAGATTTGTTGAGCAATTTATATATGGAGAATTAGGAAGA ACTTTCGCCGGGCATGGTAGCACATGCCTGTGACCCAAGTGGGGGCAATAAAGTGCTTGTAGAATGTGTGGGCAGTTCCT CTCTGCTGGTTCACCGATGAAAGGGTAGCGCCCTGAGTGTTGGGCGTTTGGGCGCCTGAGTGTCAGTGCGTTTGTCGCCC AAGAACACTCGGTGGAGTGTGCGTTGGCTTATCAGAGCAACAGCTCTTTGTGACTGGGATGTGCATTCCATTCCAGTGCC GGATGTACGGGACCCTCTAGAAGAGAACACCCACGTTAAGCATTCAACTTTCACTTTTTATTTTTGCTTTGAAATTTCGT GAGAATGAATAGAGACAGAAAGTGATTCCAGTGTGATTCCCTGTATTACTGGAATGTGAAATTTTATTGCCTCCTTTCTT TCTTTTGTTTCAGTGGATTTTGTTATAAACTATACGTGTCCCCCACATCGTCCAACGAATTCAACCACCAATTTTGC
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0288900.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGATCCTGCTGCTGCTGCTGAAGAATTACCTCCATATATTCATATAACTCAGAATGATTTTTTTACGCGAAGGCATAA GAAACAGAAGGAGGAGGATATTGCTATATGTGAATGCAGGTATAACTCTGATGACCCCGATAGTGCGTGTGGGGATAGGT GCCTGAATGTGTTAACCAGCTCTGAATGCACCCCTGGTTATTGCCCTTGTGGTATCTTTTGCAAAAATCAGAAATTTCAG AAGTGTGAATATGCTAAAACAAAGTTGTTCAAAACTGAAGGCCGGGGGTGGGGTCTTTTGGCTGATGAGGACATTAAGGA AGGACAATTTGTCATTGAATACTGTGGAGAAGTAATATCGTGGAAAGAAGCCAAGCGTAGATCGCATGCTTATGAAGTTC AAGGTCTTAAGGATGCATTTATTATTTGCCTAAATGCATCTGAATCTATTGATGCAACACGGAAAGGAAGCCTTGCGAGA TTTATTAATCATTCCTGTCAACCAAACTGTGAGACAAGAAAATGGAATGTCTTGGGTGAAACAAGAGTTGGCATATTTGC AAAGCATGATATTTCAATTGGAACTGAATTGGCATATGACTATAATTTTGAATGGTTTGGAGGTGCAAAGGTTCGCTGCC TCTGTGGTGCAGTCAAATGTTCTGGATTCCTTGGAGCAAAATCTCGCGGTTTTCAGGAGGATACTTATCTATGGGAAGAT GATGATGACAGGTACTCTGTTGAGAAAATTCCTGTATATGACTCTGCAGAGGATGAAGTGATGTCGGATGTTAATGGACA AACTGCACATTCCATGGATGTTATGCCTAAAGCTGAGCAGTTATCGGAGTCCTCGGATGTTCAGCTGATTGATTCAGTTC AGATGAACGGTTTAGATGTCAAGAAGATTAAAACTGATGTAGCAGGTGAAGATATGAAGTTGTACTCCATAGATACCGAG CCGGCCCTTGAGCAAAAAAATGCGATGATATCACGTATCCGAAGTAATGCTGCAGGCAGAAACTATTCCATTGGACCTAG GTCCATGTCTACCAAAAGATCGAAGGCATATAATGGGGGAAAGTTTAAAAACATCATTAAGAAGAAAGTTGATGTAAAGT TTGCAGTTGGCCTCTTAACATCAAAGGAAGCACAAGAGGAGATTTTAGATTCTGAGAGAAGAAAAACCGATGCTACATCT GGTCTTGATTCCTTATACAACGAAATACGGCCCGCCATCGAAGAACATGAGAGGGATAGCCAAGACAGTGTATCTACGAC AGTTGCAGAGAAGTGGATACAGGCTTGCTGCCTAAAATTGAAGGCGGAGTTTGACCTTTACTCGGCAATCGTCAAAAATG TTGCTTGCACTGCTCAAGGGGTACCTGGCCAAGCAAAACCTACTGAAGTAGATAATGAAAACGAAATCAAGCTTTTGACA GATTGA
Download CDS Sequence

Protein sequence (LotjaGi5g1v0288900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MDPAAAAEELPPYIHITQNDFFTRRHKKQKEEDIAICECRYNSDDPDSACGDRCLNVLTSSECTPGYCPCGIFCKNQKFQ KCEYAKTKLFKTEGRGWGLLADEDIKEGQFVIEYCGEVISWKEAKRRSHAYEVQGLKDAFIICLNASESIDATRKGSLAR FINHSCQPNCETRKWNVLGETRVGIFAKHDISIGTELAYDYNFEWFGGAKVRCLCGAVKCSGFLGAKSRGFQEDTYLWED DDDRYSVEKIPVYDSAEDEVMSDVNGQTAHSMDVMPKAEQLSESSDVQLIDSVQMNGLDVKKIKTDVAGEDMKLYSIDTE PALEQKNAMISRIRSNAAGRNYSIGPRSMSTKRSKAYNGGKFKNIIKKKVDVKFAVGLLTSKEAQEEILDSERRKTDATS GLDSLYNEIRPAIEEHERDSQDSVSTTVAEKWIQACCLKLKAEFDLYSAIVKNVACTAQGVPGQAKPTEVDNENEIKLLT D
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:2.170.270.10
2 237 236 1.6E-74 –
PANTHER
PTHR22884
8 423 416 3.2E-120 –
SUPERFAMILY
SSF82199
11 222 212 2.09E-65 –
ProSiteProfiles
PS51215
32 83 52 14.968
IPR006560
SMART
SM00570
32 84 53 1.0E-19
IPR006560
Pfam
PF17907
44 82 39 1.9E-15
IPR006560
ProSiteProfiles
PS50280
85 202 118 19.601
IPR001214
SMART
SM00317
85 208 124 1.3E-41
IPR001214
Pfam
PF00856
96 202 107 2.0E-19
IPR001214
SMART
SM00508
209 225 17 0.0017
IPR003616
ProSiteProfiles
PS50868
209 225 17 9.527
IPR003616
MobiDBLite
mobidb-lite
461 481 21 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of
GO:0005634
Cellular component Nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
Subterm of
GO:0018024
Molecular function Histone-lysine N-methyltransferase activity Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0288900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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