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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0199300 |
| Transcript ID | LotjaGi6g1v0199300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Histone-lysine N-methyltransferase; TAIR: AT4G30860.1 SET domain group 4; Swiss-Prot: sp|Q949T8|ASHR3_ARATH Histone-lysine N-methyltransferase ASHR3; TrEMBL-Plants: tr|A0A0L9UBQ6|A0A0L9UBQ6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0199300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:49604942..49609813) extracted from Lotus japonicus Gifu genome v1.2.
CGCCGTTTCTCTCTCTCTCTCCTCGCCCTCTCTCTCTCTCTCTATGCCCCTTCCCGCAGCCACCATCCCCAAACCCACCA CCATGCCAGACTTGGCCAACCTCTCTCTCCCCCTCACTCACTGCTCCACCGTCAATCCCCCCGACGCCACCGCCGCTGAT TCCCCCGTCAAACCCCTACCCAACGACTACCCTTCCGACGACAACGACGCCGCTGAAGCTCGCGTCCTCAAGCGCAGCCG CGGCTCCGTCGAACGGGTCAAGAAGGCTTCCAATGACTCAAACTTCATGGATCACCTCAAAGATCCTTTCTCCCTTCCCT TCCTCTTTGGTGCTCCCAAAATGGTACACAACTACACATACCCAATTCACTGTTTTATCTCCTTTGTTTTTCTGAATTAG GGTTTAGTAGAATTGAACTGTTTGGTAATGTACTTGATTTGATTAAGCTTTGACTCAATTTGACTGATGCTGGTGGGTTT TGTTTTTTTCAATTTTGATTTTCAATTGGGGGTTCAGGTTGAATGTCATTTCTGTCACCATTGTATCTGCCCTGGGGAGG AGGTGTTATGCTCTGTTCGTGGATGTGGCGCACGCTACCACATGGATTGTGCTAAAGAAGCTGGTGGGGCTTCAAATGTG AAAAAATTCAAGTGCCCACAACATGTGAGTTTTCACTGAATGCAACGTTTGTCTCTAACATTGATATGTACTGTTTTGAT GTGAAGCTGGATTAATGTGTATTGTTGCCTCAAATTCTTACTGCATTTATTGGGCATCTGGGGAGTCAGTATAGCCATGA TTTTCGTTATGTAAATTATAGATCTCTTGAGTCAACAAATCTATCAATGATTAATATGAAAATTAACATTACTGAAAGAA ATCCAATTCTATGTAAGACAAGAACCCTAATAGCAGATTTCCCGGTGGGTGGTAAATGTTAGCCCTAGTGTGGAGCATCA TCAATGAGGAGATCTTGCATGATGCTCTTCAACTTAGTGTGGTCAATGAGGTAATCAATGGCTCATATTAATTTGGAGCA AATGAGTTATATTTGTGTCATCTGATGAATGGGGGTCATATATCATACAAGTGAAGAGGGAGATCACAAGCCCTAGGTGT TGTTGTGCACGAGATGCTTCAAAAACATTCTCAAATCTGGTCTAAATATTCATTAATGAAAATGATTTTTTGAGAATATT GAGTTGGAAGCTTGATTAGATATTCCGTATTTATGCAATCAATATTTAACAACACAATCTGTTTTGCTCCTGTGTGTGTT TATTTGGGGGGTGGAGATGCATTTGGTACATCCTAGTGCTTTAGAGTTCCATAAATCCCAAATAGATTTGGTTTCCACAT GCTATAGATGCTATCTTGGATTTGCTGTTTTGCCTTTGTTTTGTGTGCTTTGTCTTGCCATAGTATATTAAGTCTTTCAG TGAGCAGGTGTGTTTCGTTTGCAAACAAAGATTGCACTTGCGGTGTGTCCGTTGCCCAATGGCTTTCCATACTAAATGCG CACCATGGCCGGATGCAGTAATTGATCTGAAAGATCATCCGGGTCAAGCTGTTTGTTGGAGACATCCTTCTGATTGGCGC CTGGATAGAAAGGTCAAATTTTTCTTTTCACCAGAACCATTTACCTTCACTGTTCATTGTTTATACTGGAAATTGCAATA TGTGCCATATTCAAGTTCAGTTACTTGATCTGTTTGGAAAATCTAATTTTATTGTTTCTTTCTTTACCTTCCCATGTGTC CACTCACCCTTCTATTCTGTAAGCTGCCACCTTGAAAATATGTATTTTCTTGTCCAATATTAGCTCATATTTCACCAAGT GGTTTTTAAATTCTCTCCATTTTCTTCATTACATTGATTTCTGTTTTGCTGGTGGGGGGCTATTCCCAGGTTATTTATTT ATTTAGTTTTTTCCCTCATGCGTTTTTCATTTTGCTTGGGGAGGATAGGTCAGAGGGGAAGGGGGTATCTGCAATTGTTT ATTACTTATATATTTGTTATGGAAAGTTTGAAGCCACTAAAAGTTTGTAATCGTAGATTTCTTTTCTTTTCTATCCTATG CGCCATGTGAAAGATATTACCAGAGTTTGCAAAGTTTTCATGGTACCATGTTGGTATTCTAAATAACCACGATCTTATTT GATGTTAAAATTGTCTTAGAAGTGGTCACAGTAATATACTGCATAGAATTGTGAAATATTTCTCACTAGATTTAGATTGT TACTTTCGAAGTTTTATTACTTTGTTGGTATTTTTTAATTGATTAGGCTGGCTAACAGGACTTTGTGTTTGTTGGATGAG CAGCCTGAAACTTCGACAAGTGACATTTCGGTAAGGTTTATGAAGAATATCATTATATCTGTTTTCTAATGTATGAATAA CAATTCCTGACCTTTGCTGTAACTCTGCATGGTGTATTTGACATTTCTGGATATTTGGTACAAAAATAATATATAATTTG TAGTTGTAGGAGAAAGAAAGAAATTTATATGATTAAAGTGCTACATATTCTGAAGTACTCTATATTTTGATGATTTTGGT TGTTCATCATATATGCCTGTGCCTTGAGTTATTGAGTGTATGGTTAAGCTAATCCACTAGTCATATCACATGCATTTGGA TTTGATAATTTAATTTGGTTAATATCTAGTGAAAATTTTCTGACTTACCTGCCCTTTTCTAGGAAGCATTTTGTCGCTTG CCCCTTCCTTTTACCGAAGAGGAGTTCAAGATTGACTTCAATTGGAAAGATACGGACACTAAGATGGAGCCACCACCATA TGCACACATAAGACGAAGTATGATATTTATTGTGTGTTCGAATGTTAAGTAAAAGAATTTGATTTTTACTCTTGGTAAAC TCAGTATTTTTTAATTATTGTGCTGATCATCATGTTGCTGGCCTAAATTTATATCAGATATATATCTAGTGAAGAAGAAG CGTAGTGTTGTAGATGATGAAGATGCAGGATGCACCAGTTGCAGTTCTACATGTTCTGAAGACTGTGTATGCAGGTACAT GCTGTATTATCTTCGAAATTGTTTTGAATGAAACATTCTGTAGGCTTTGAAATTTTATTTGACAATGAATTTTGTCTATG CATATCCAATATATGAATGCTTTGAGCGATTCAATATTTTCTGATCCTAGGCAAGAAGGATAAAGTGCAATTGATTGCCT GCTAATCCTGTTGAGCTAAATAAATAAAACTATATTTATCTTCTCCCTGTGGATTTGAGAGGATCTACACTTTCAGTTAT ACACCAAATGTCTAACTATAGCACACCACATGACTTATATTTCCGCGTCACTGGAACTGGTTGTAACACTAACATTATTG TGTAAGATTTCATAAACAGGGTTATATATTAAGTACTGAATGATATTATTCACTTATCAGGGTTCAATGCATAAGCTGCT CAAAGGCTTGTCGCTGCTCAGAAAATTGCAGTAATCGGCCATTTCGCAAGGAGAAAAAAATGGAGATTGTCAAGGTTTGA AATTTTACTACAGTAAGATGGATGAAATATTTTTTCAAGTTGGTTTTCTTCTTATTGGGCTTAAACTTCCTAATCTATGT TCATAATCAGACTTTACTTTGTGGATGGGGAGTAGAAGCCGCTGAAGCAATTGAAAAAGGCGAATTTATAATTGAATATA TTGGAGAAGGTAGCTTATTTCTAAATTGCTTATAGTCTTATACCATCAAAACATTGTCTCCCCCCAGTCCCCATCTTTCA TACCATAATCCGATCGATGACTTTCAAAAAAAGAGAACGTCATTTGATGTTTTAAATGCACATGATCTTCAATCATATAA TTTTCGCAGGCTCACAGCTGATATCTGTAAACTATGCCTTATGCTCTTATCCCCATTTGACAAGAAATGTTTTCTGCTGC AGTCATTGATGATGCTTTATGTGAAAAAAGGCTTTGGGACATGAAAGACCAGGGCGTACAAAATTTCTACATGTGTGAGA TTCGGAAAGACTTCACAATAGATGCAACTTTCAAAGGAAACACATCACGGTTTTTAAACCATAGCTGCAATCCAAACTGT GTTTTGGAAAAGTGGTCAGTGCCAAAAACTCTACCCCACTTGTCCTTGGCTTTATGATTTTCTTACTCTTCAAGGACTCT AGATATATAGTGTACCACCATGCTACATTTGTGTCTAAATTTTTGTGGTTTGTTGTAGGCAAGTTGATGGTGAAACCCGT GTGGGTGTATTTGCTGCTCGTTCAATAGAAGTTGGAGAGCCATTAACGTATGATTACAGGTAATTTTTACACAACCTCCT ACTTTCTTATCATTCAGTAGCAACATCTAATTAACATTTTTTTTGTCTAATAGTAACTTGTAATAACAGTGATTAATGTG TTATCTGGTATTTCAGATTTGTGCAATTTGGTCCAGAGGTGAAATGTCACTGTGGTGCCCCAAATTGTCAAGGCTTTCTA GGTACCAAAAAGAAGATTAGCAAGGTACACATCCGTTGGGGCTCCAAACGTAAGAGAACTTCAAAATCTCGCAAGTGTAG GCAAATTGAAAAGCCAACAACTATAAATGGCCATTTGGGGAGTGTCTGAGGGTTTTTCCTCAAACATTCTCATTCTATTC TTCTGTAGAGGAAAAAGGTGACAATTTCTTCATATACATTTTTACAAGGCACAATTTTACCCTAGTCAAAATAAGAAAAC GTGTAAATTGATTTTGCTGAGATAGTGCATCAATATTACAGCATTGAATAATGAATTACAAGGATCTAAATTTTTTATTG AATTTTAAAATACTTTGTTCCTAAATTTTGAGCATTGATTTGGTTTATGATCAATTAGTAAAGTCACTATGA
CDS sequence (LotjaGi6g1v0199300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCCCTTCCCGCAGCCACCATCCCCAAACCCACCACCATGCCAGACTTGGCCAACCTCTCTCTCCCCCTCACTCACTG CTCCACCGTCAATCCCCCCGACGCCACCGCCGCTGATTCCCCCGTCAAACCCCTACCCAACGACTACCCTTCCGACGACA ACGACGCCGCTGAAGCTCGCGTCCTCAAGCGCAGCCGCGGCTCCGTCGAACGGGTCAAGAAGGCTTCCAATGACTCAAAC TTCATGGATCACCTCAAAGATCCTTTCTCCCTTCCCTTCCTCTTTGGTGCTCCCAAAATGGTTGAATGTCATTTCTGTCA CCATTGTATCTGCCCTGGGGAGGAGGTGTTATGCTCTGTTCGTGGATGTGGCGCACGCTACCACATGGATTGTGCTAAAG AAGCTGGTGGGGCTTCAAATGTGAAAAAATTCAAGTGCCCACAACATGTGTGTTTCGTTTGCAAACAAAGATTGCACTTG CGGTGTGTCCGTTGCCCAATGGCTTTCCATACTAAATGCGCACCATGGCCGGATGCAGTAATTGATCTGAAAGATCATCC GGGTCAAGCTGTTTGTTGGAGACATCCTTCTGATTGGCGCCTGGATAGAAAGCCTGAAACTTCGACAAGTGACATTTCGG AAGCATTTTGTCGCTTGCCCCTTCCTTTTACCGAAGAGGAGTTCAAGATTGACTTCAATTGGAAAGATACGGACACTAAG ATGGAGCCACCACCATATGCACACATAAGACGAAATATATATCTAGTGAAGAAGAAGCGTAGTGTTGTAGATGATGAAGA TGCAGGATGCACCAGTTGCAGTTCTACATGTTCTGAAGACTGTGTATGCAGGGTTCAATGCATAAGCTGCTCAAAGGCTT GTCGCTGCTCAGAAAATTGCAGTAATCGGCCATTTCGCAAGGAGAAAAAAATGGAGATTGTCAAGACTTTACTTTGTGGA TGGGGAGTAGAAGCCGCTGAAGCAATTGAAAAAGGCGAATTTATAATTGAATATATTGGAGAAGTCATTGATGATGCTTT ATGTGAAAAAAGGCTTTGGGACATGAAAGACCAGGGCGTACAAAATTTCTACATGTGTGAGATTCGGAAAGACTTCACAA TAGATGCAACTTTCAAAGGAAACACATCACGGTTTTTAAACCATAGCTGCAATCCAAACTGTGTTTTGGAAAAGTGGCAA GTTGATGGTGAAACCCGTGTGGGTGTATTTGCTGCTCGTTCAATAGAAGTTGGAGAGCCATTAACGTATGATTACAGATT TGTGCAATTTGGTCCAGAGGTGAAATGTCACTGTGGTGCCCCAAATTGTCAAGGCTTTCTAGGTACCAAAAAGAAGATTA GCAAGGTACACATCCGTTGGGGCTCCAAACGTAAGAGAACTTCAAAATCTCGCAAGTGTAGGCAAATTGAAAAGCCAACA ACTATAAATGGCCATTTGGGGAGTGTCTGA
Protein sequence (LotjaGi6g1v0199300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPLPAATIPKPTTMPDLANLSLPLTHCSTVNPPDATAADSPVKPLPNDYPSDDNDAAEARVLKRSRGSVERVKKASNDSN FMDHLKDPFSLPFLFGAPKMVECHFCHHCICPGEEVLCSVRGCGARYHMDCAKEAGGASNVKKFKCPQHVCFVCKQRLHL RCVRCPMAFHTKCAPWPDAVIDLKDHPGQAVCWRHPSDWRLDRKPETSTSDISEAFCRLPLPFTEEEFKIDFNWKDTDTK MEPPPYAHIRRNIYLVKKKRSVVDDEDAGCTSCSSTCSEDCVCRVQCISCSKACRCSENCSNRPFRKEKKMEIVKTLLCG WGVEAAEAIEKGEFIIEYIGEVIDDALCEKRLWDMKDQGVQNFYMCEIRKDFTIDATFKGNTSRFLNHSCNPNCVLEKWQ VDGETRVGVFAARSIEVGEPLTYDYRFVQFGPEVKCHCGAPNCQGFLGTKKKISKVHIRWGSKRKRTSKSRKCRQIEKPT TINGHLGSV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 37 | 37 | - | – | |
| ProSiteProfiles | 14 | 479 | 466 | 281.643 | ||
| MobiDBLite | 33 | 54 | 22 | - | – | |
| PANTHER | 63 | 472 | 410 | 2.3E-221 | – | |
| PANTHER | 63 | 472 | 410 | 2.3E-221 | – | |
| Gene3D | 99 | 219 | 121 | 1.2E-8 | ||
| SMART | 102 | 150 | 49 | 0.017 | ||
| SMART | 151 | 196 | 46 | 21.0 | ||
| SUPERFAMILY | 218 | 438 | 221 | 5.23E-62 | – | |
| Gene3D | 223 | 471 | 249 | 2.3E-71 | – | |
| ProSiteProfiles | 266 | 309 | 44 | 12.441 | ||
| SMART | 309 | 432 | 124 | 2.0E-43 | ||
| ProSiteProfiles | 309 | 426 | 118 | 18.685 | ||
| Pfam | 320 | 425 | 106 | 2.0E-18 | ||
| SMART | 432 | 448 | 17 | 3.0E-4 | ||
| ProSiteProfiles | 432 | 448 | 17 | 10.215 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Molecular function | Histone-lysine N-methyltransferase activity | Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives. |
Expression pattern of LotjaGi6g1v0199300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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