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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR006620
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We have found 36 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.293s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0129829.1
n.a. PREDICTED: prolyl 4-hydroxylase subunit alpha-1-like [Glycine max] gi|356550516|ref|XP_003543632.1| chr0 58792912 58797868 +
2 domain predictions
4 GO terms
Lj0g3v0163879.1
n.a. 2-oxoglutarate and Fe(II)-dependent oxygenase superfamily protein isoform 1 [Theobroma cacao] gi|508778273|gb|EOY25529.1| chr0 77503006 77510893 -
2 domain predictions
4 GO terms
Lj0g3v0186299.1
n.a. Prolyl 4-hydroxylase subunit alpha-1 [Medicago truncatula] gi|357476355|ref|XP_003608463.1| chr0 90741730 90745161 -
2 domain predictions
4 GO terms
Lj1g3v0715730.1
n.a. PREDICTED: prolyl 4-hydroxylase subunit alpha-1-like isoform X1 [Cicer arietinum] gi|502161478|ref|XP_004512179.1| chr1 9427693 9431211 -
2 domain predictions
4 GO terms
Lj1g3v2251610.1
n.a. PREDICTED: prolyl 4-hydroxylase subunit alpha-2-like [Glycine max] gi|356517655|ref|XP_003527502.1| chr1 26470404 26474568 -
2 domain predictions
4 GO terms
Lj2g3v0371560.1
n.a. PREDICTED: prolyl 4-hydroxylase subunit alpha-2-like [Fragaria vesca subsp]. vesca] gi|470147195|ref|XP_004309201.1| chr2 5876407 5880219 -
2 domain predictions
4 GO terms
Lj2g3v1022720.1
n.a. PREDICTED: prolyl 4-hydroxylase subunit alpha-1-like [Glycine max] gi|356550516|ref|XP_003543632.1| chr2 16217380 16222204 -
2 domain predictions
4 GO terms
Lj4g3v2375000.1
n.a. PREDICTED: prolyl 4-hydroxylase subunit alpha-1-like [Cicer arietinum] gi|502151204|ref|XP_004508327.1| chr4 32835668 32838432 -
2 domain predictions
4 GO terms
Lj4g3v2406420.1
n.a. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Arabidopsis thaliana] gi|79375455|ref|NP_176975.2| chr4 33419214 33422370 -
2 domain predictions
4 GO terms
Lj5g3v2029560.1
n.a. 2-oxoglutarate and Fe(II)-dependent oxygenase superfamily protein isoform 1 [Theobroma cacao] gi|508775787|gb|EOY23043.1| chr5 28713694 28717773 -
2 domain predictions
4 GO terms
Lj5g3v2111920.1
n.a. PREDICTED: prolyl 4-hydroxylase subunit alpha-1-like [Glycine max] gi|356536125|ref|XP_003536590.1| chr5 30194220 30197054 -
2 domain predictions
4 GO terms
Lj5g3v2169580.2
n.a. 2-oxoglutarate and Fe(II)-dependent oxygenase superfamily protein isoform 2 [Theobroma cacao] gi|508778274|gb|EOY25530.1| chr5 31187986 31192865 +
2 domain predictions
4 GO terms
Lj5g3v2302900.1
n.a. PREDICTED: prolyl 4-hydroxylase subunit alpha-1-like [Glycine max] gi|356576923|ref|XP_003556579.1| chr5 34093919 34102980 -
2 domain predictions
4 GO terms
Lj6g3v1915970.1
n.a. Prolyl 4-hydroxylase alpha subunit-like protein [Medicago truncatula] gi|357447555|ref|XP_003594053.1| chr6 21585677 21589333 +
2 domain predictions
4 GO terms
LotjaGi1g1v0431900.1
n.a. Prolyl 4-hydroxylase alpha subunit, putative; TAIR: AT1G20270.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q9LN20|P4H3_ARATH Probable prolyl 4-hydroxylase 3; TrEMBL-Plants: tr|I1JSZ3|I1JSZ3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0431900 LjG1.1_chr1 92670158 92684146 -
2 domain predictions
4 GO terms
LotjaGi1g1v0431900.2
n.a. Prolyl 4-hydroxylase alpha subunit, putative; TAIR: AT1G20270.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q9LN20|P4H3_ARATH Probable prolyl 4-hydroxylase 3; TrEMBL-Plants: tr|I1JSZ3|I1JSZ3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0431900 LjG1.1_chr1 92679919 92683677 -
2 domain predictions
4 GO terms
LotjaGi1g1v0431900.3
n.a. Prolyl 4-hydroxylase alpha subunit, putative; TAIR: AT1G20270.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q9LN20|P4H3_ARATH Probable prolyl 4-hydroxylase 3; TrEMBL-Plants: tr|I1JSZ3|I1JSZ3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0431900 LjG1.1_chr1 92679919 92683677 -
2 domain predictions
4 GO terms
LotjaGi2g1v0140400.2
n.a. Prolyl 4-hydroxylase alpha subunit, putative; TAIR: AT4G25600.1 Oxoglutarate/iron-dependent oxygenase; Swiss-Prot: sp|Q8GXT7|P4H12_ARATH Probable prolyl 4-hydroxylase 12; TrEMBL-Plants: tr|K7LDR1|K7LDR1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0140400 LjG1.1_chr2 51194246 51197924 -
2 domain predictions
4 GO terms
LotjaGi2g1v0201400.1
n.a. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; TAIR: AT3G18210.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q3ED68|Y1295_ARATH Uncharacterized PKHD-type hydroxylase At1g22950; TrEMBL-Plants: tr|A0A0S3TCF2|A0A0S3TCF2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0201400 LjG1.1_chr2 64005434 64014082 +
2 domain predictions
4 GO terms
LotjaGi2g1v0254100.1
n.a. Prolyl 4-hydroxylase alpha subunit, putative; TAIR: AT3G28480.1 Oxoglutarate/iron-dependent oxygenase; Swiss-Prot: sp|Q8L970|P4H7_ARATH Probable prolyl 4-hydroxylase 7; TrEMBL-Plants: tr|I1LWH3|I1LWH3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0254100 LjG1.1_chr2 72007404 72012513 -
2 domain predictions
4 GO terms
LotjaGi2g1v0377800.1
n.a. Prolyl 4-hydroxylase alpha subunit, putative; TAIR: AT5G66060.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|F4JZ24|P4H10_ARATH Probable prolyl 4-hydroxylase 10; TrEMBL-Plants: tr|G7JYR0|G7JYR0_MEDTR Prolyl 4-hydroxylase alpha-like protein; Found in the gene: LotjaGi2g1v0377800 LjG1.1_chr2 87492927 87497837 +
2 domain predictions
4 GO terms
LotjaGi2g1v0377800.2
n.a. Prolyl 4-hydroxylase alpha subunit, putative; TAIR: AT5G66060.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|F4JZ24|P4H10_ARATH Probable prolyl 4-hydroxylase 10; TrEMBL-Plants: tr|G7JYR0|G7JYR0_MEDTR Prolyl 4-hydroxylase alpha-like protein; Found in the gene: LotjaGi2g1v0377800 LjG1.1_chr2 87493175 87496357 +
2 domain predictions
4 GO terms
LotjaGi4g1v0097500.1
n.a. Prolyl 4-hydroxylase alpha subunit, putative; TAIR: AT4G33910.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q8VZJ7|P4H9_ARATH Probable prolyl 4-hydroxylase 9; TrEMBL-Plants: tr|G7JCT5|G7JCT5_MEDTR Prolyl 4-hydroxylase alpha-like protein; Found in the gene: LotjaGi4g1v0097500 LjG1.1_chr4 13172969 13177763 -
2 domain predictions
4 GO terms
LotjaGi4g1v0133000.1
n.a. Prolyl 4-hydroxylase alpha subunit, putative; TAIR: AT5G66060.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|F4JZ24|P4H10_ARATH Probable prolyl 4-hydroxylase 10; TrEMBL-Plants: tr|A0A1J7HAJ4|A0A1J7HAJ4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0133000 LjG1.1_chr4 19390781 19394831 -
2 domain predictions
4 GO terms
LotjaGi4g1v0348100.1
n.a. Prolyl 4-hydroxylase subunit alpha-like protein; TAIR: AT5G18900.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q8LAN3|P4H4_ARATH Probable prolyl 4-hydroxylase 4; TrEMBL-Plants: tr|I3S5N2|I3S5N2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0348100 LjG1.1_chr4 72708366 72711857 -
2 domain predictions
4 GO terms
LotjaGi4g1v0357500.1
n.a. Prolyl 3-hydroxylase 1; TAIR: AT1G68080.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q6JHU8|P3H1_CHICK Prolyl 3-hydroxylase 1; TrEMBL-Plants: tr|I1KRR4|I1KRR4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0357500 LjG1.1_chr4 73611462 73620367 -
2 domain predictions
4 GO terms
LotjaGi4g1v0357500.3
n.a. Prolyl 3-hydroxylase 1; TAIR: AT1G68080.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q6JHU8|P3H1_CHICK Prolyl 3-hydroxylase 1; TrEMBL-Plants: tr|I1KRR4|I1KRR4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0357500 LjG1.1_chr4 73612822 73618977 -
2 domain predictions
4 GO terms
LotjaGi4g1v0460800.1
n.a. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; TAIR: AT3G18210.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q3ED68|Y1295_ARATH Uncharacterized PKHD-type hydroxylase At1g22950; TrEMBL-Plants: tr|A0A0R4J448|A0A0R4J448_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0460800 LjG1.1_chr4 83147986 83154908 -
2 domain predictions
4 GO terms
LotjaGi5g1v0305600.1
n.a. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; TAIR: AT5G51880.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q9L9F0|NOVR_STRNV Decarboxylase NovR; TrEMBL-Plants: tr|I1LDW4|I1LDW4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0305600 LjG1.1_chr5 62379744 62384341 -
2 domain predictions
4 GO terms
LotjaGi5g1v0305600.2
n.a. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; TAIR: AT5G51880.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q9L9F0|NOVR_STRNV Decarboxylase NovR; TrEMBL-Plants: tr|I1LDW4|I1LDW4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0305600 LjG1.1_chr5 62381238 62384319 -
2 domain predictions
4 GO terms
LotjaGi5g1v0324400.1
n.a. Prolyl 4-hydroxylase alpha subunit, putative; TAIR: AT4G33910.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q8VZJ7|P4H9_ARATH Probable prolyl 4-hydroxylase 9; TrEMBL-Plants: tr|I1LEG4|I1LEG4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0324400 LjG1.1_chr5 64258456 64261426 -
2 domain predictions
4 GO terms
LotjaGi5g1v0324400.2
n.a. Prolyl 4-hydroxylase alpha subunit, putative; TAIR: AT4G33910.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q8VZJ7|P4H9_ARATH Probable prolyl 4-hydroxylase 9; TrEMBL-Plants: tr|I1LEG4|I1LEG4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0324400 LjG1.1_chr5 64258456 64261426 -
2 domain predictions
4 GO terms
LotjaGi5g1v0334000.1
n.a. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; TAIR: AT3G18210.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q3ED68|Y1295_ARATH Uncharacterized PKHD-type hydroxylase At1g22950; TrEMBL-Plants: tr|A0A072W1J5|A0A072W1J5_MEDTR 2OG-Fe(II) oxygenase family oxidoreductase; Found in the gene: LotjaGi5g1v0334000 LjG1.1_chr5 65081502 65087606 +
2 domain predictions
4 GO terms
LotjaGi5g1v0365100.1
n.a. Prolyl 4-hydroxylase subunit alpha-1; TAIR: AT2G43080.1 P4H isoform 1; Swiss-Prot: sp|Q9ZW86|P4H1_ARATH Prolyl 4-hydroxylase 1; TrEMBL-Plants: tr|A0A0S3SKX9|A0A0S3SKX9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0365100 LjG1.1_chr5 67966646 67975488 -
2 domain predictions
4 GO terms
LotjaGi6g1v0303800.1
n.a. Prolyl 4-hydroxylase subunit alpha-like protein; TAIR: AT5G18900.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q8LAN3|P4H4_ARATH Probable prolyl 4-hydroxylase 4; TrEMBL-Plants: tr|I3S8E5|I3S8E5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0303800 LjG1.1_chr6 62127836 62131910 +
2 domain predictions
4 GO terms
LotjaGi6g1v0303800.2
n.a. Prolyl 4-hydroxylase subunit alpha-like protein; TAIR: AT5G18900.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|Q8LAN3|P4H4_ARATH Probable prolyl 4-hydroxylase 4; TrEMBL-Plants: tr|I3S8E5|I3S8E5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0303800 LjG1.1_chr6 62128067 62131280 +
2 domain predictions
4 GO terms