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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR006887
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.910s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj4g3v2267700.1
n.a. PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3-like [Glycine max] gi|356564712|ref|XP_003550593.1| chr4 31671158 31680304 -
2 domain predictions
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Lj4g3v2267700.2
n.a. PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3-like [Glycine max] gi|356564712|ref|XP_003550593.1| chr4 31671158 31680304 -
2 domain predictions
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Lj6g3v1559300.1
n.a. PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3-like isoform X1 [Cicer arietinum] gi|502084857|ref|XP_004487777.1| chr6 17769573 17784941 +
2 domain predictions
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LotjaGi4g1v0329700.1
n.a. Serine/threonine-protein phosphatase 4 regulatory subunit 3; TAIR: AT3G06670.1 binding protein; Swiss-Prot: sp|Q5SP90|PP4R3_DANRE Serine/threonine-protein phosphatase 4 regulatory subunit 3; TrEMBL-Plants: tr|A0A0L9TSA7|A0A0L9TSA7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0329700 LjG1.1_chr4 70894071 70912566 +
2 domain predictions
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LotjaGi4g1v0329700.2
n.a. Serine/threonine-protein phosphatase 4 regulatory subunit 3; TAIR: AT3G06670.1 binding protein; Swiss-Prot: sp|Q5SP90|PP4R3_DANRE Serine/threonine-protein phosphatase 4 regulatory subunit 3; TrEMBL-Plants: tr|A0A0S3R9A6|A0A0S3R9A6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0329700 LjG1.1_chr4 70894197 70912331 +
2 domain predictions
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LotjaGi6g1v0256800.1
n.a. Serine/threonine-protein phosphatase 4 regulatory subunit 3; TAIR: AT3G06670.1 binding protein; Swiss-Prot: sp|Q5SP90|PP4R3_DANRE Serine/threonine-protein phosphatase 4 regulatory subunit 3; TrEMBL-Plants: tr|I1MGG6|I1MGG6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0256800 LjG1.1_chr6 56966257 56983122 +
2 domain predictions
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LotjaGi6g1v0256800.2
n.a. Serine/threonine-protein phosphatase 4 regulatory subunit 3; TAIR: AT3G06670.1 binding protein; Swiss-Prot: sp|Q5SP90|PP4R3_DANRE Serine/threonine-protein phosphatase 4 regulatory subunit 3; TrEMBL-Plants: tr|G7IG10|G7IG10_MEDTR Component of IIS longevity pathway SMK-1 domain protein; Found in the gene: LotjaGi6g1v0256800 LjG1.1_chr6 56966258 56982722 +
2 domain predictions
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