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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR007452
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.687s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v1931400.1
n.a. Embryo defective 2410 isoform 1 [Theobroma cacao] gi|508784096|gb|EOY31352.1| chr1 22988880 23001363 -
2 domain predictions
2 GO terms
Lj1g3v1931400.2
n.a. Embryo defective 2410 isoform 1 [Theobroma cacao] gi|508784096|gb|EOY31352.1| chr1 22988880 22996737 -
2 domain predictions
2 GO terms
Lj5g3v0551220.1
n.a. Embryo defective 2410 isoform 1 [Theobroma cacao] gi|508784096|gb|EOY31352.1| chr5 6548781 6576080 -
2 domain predictions
2 GO terms
Lj5g3v0551220.2
n.a. Embryo defective 2410 isoform 1 [Theobroma cacao] gi|508784096|gb|EOY31352.1| chr5 6548781 6567922 -
2 domain predictions
2 GO terms
LotjaGi1g1v0389900_LC.2
n.a. Embryo defective 2410 protein; TAIR: AT2G25660.2 embryo defective 2410; Swiss-Prot: sp|Q09670|OYEA_SCHPO Putative NADPH dehydrogenase C5H10.04; TrEMBL-Plants: tr|A0A1J7GBQ8|A0A1J7GBQ8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0389900_LC LjG1.1_chr1 87321715 87331593 -
2 domain predictions
2 GO terms
LotjaGi5g1v0063200.1
n.a. Embryo defective 2410 protein; TAIR: AT2G25660.2 embryo defective 2410; Swiss-Prot: sp|B8DC21|CCA_LISMH CCA-adding enzyme; TrEMBL-Plants: tr|A0A072VNV3|A0A072VNV3_MEDTR Embryo defective 2410 protein; Found in the gene: LotjaGi5g1v0063200 LjG1.1_chr5 10584475 10608187 -
2 domain predictions
2 GO terms
LotjaGi5g1v0063200.2
n.a. Embryo defective 2410 protein; TAIR: AT2G25660.2 embryo defective 2410; Swiss-Prot: sp|B8DC21|CCA_LISMH CCA-adding enzyme; TrEMBL-Plants: tr|A0A072VNV3|A0A072VNV3_MEDTR Embryo defective 2410 protein; Found in the gene: LotjaGi5g1v0063200 LjG1.1_chr5 10585160 10607962 -
2 domain predictions
2 GO terms