Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR007452
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.858s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v1931400.1
n.a. Embryo defective 2410 isoform 1 [Theobroma cacao] gi|508784096|gb|EOY31352.1| chr1 22988880 23001363 -
2 domain predictions
2 GO terms
Lj1g3v1931400.2
n.a. Embryo defective 2410 isoform 1 [Theobroma cacao] gi|508784096|gb|EOY31352.1| chr1 22988880 22996737 -
2 domain predictions
2 GO terms
Lj5g3v0551220.1
n.a. Embryo defective 2410 isoform 1 [Theobroma cacao] gi|508784096|gb|EOY31352.1| chr5 6548781 6576080 -
2 domain predictions
2 GO terms
Lj5g3v0551220.2
n.a. Embryo defective 2410 isoform 1 [Theobroma cacao] gi|508784096|gb|EOY31352.1| chr5 6548781 6567922 -
2 domain predictions
2 GO terms
LotjaGi1g1v0389900_LC.2
n.a. Embryo defective 2410 protein; TAIR: AT2G25660.2 embryo defective 2410; Swiss-Prot: sp|Q09670|OYEA_SCHPO Putative NADPH dehydrogenase C5H10.04; TrEMBL-Plants: tr|A0A1J7GBQ8|A0A1J7GBQ8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0389900_LC LjG1.1_chr1 87321715 87331593 -
2 domain predictions
2 GO terms
LotjaGi5g1v0063200.1
n.a. Embryo defective 2410 protein; TAIR: AT2G25660.2 embryo defective 2410; Swiss-Prot: sp|B8DC21|CCA_LISMH CCA-adding enzyme; TrEMBL-Plants: tr|A0A072VNV3|A0A072VNV3_MEDTR Embryo defective 2410 protein; Found in the gene: LotjaGi5g1v0063200 LjG1.1_chr5 10584475 10608187 -
2 domain predictions
2 GO terms
LotjaGi5g1v0063200.2
n.a. Embryo defective 2410 protein; TAIR: AT2G25660.2 embryo defective 2410; Swiss-Prot: sp|B8DC21|CCA_LISMH CCA-adding enzyme; TrEMBL-Plants: tr|A0A072VNV3|A0A072VNV3_MEDTR Embryo defective 2410 protein; Found in the gene: LotjaGi5g1v0063200 LjG1.1_chr5 10585160 10607962 -
2 domain predictions
2 GO terms