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PF04357

Source: Pfam

Description

TamB, inner membrane protein subunit of TAM complex

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005887
Cellular component Integral component of plasma membrane The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
Subterm of
GO:0009306
Biological process Protein secretion The controlled release of proteins from a cell.
Subterm of

Associated Lotus transcripts 7

Transcript Name Description Predicted domains Domain count
Lj1g3v1931400.1
– Embryo defective 2410 isoform 1 [Theobroma cacao] gi|508784096|gb|EOY31352.1|
Domains
6
Lj1g3v1931400.2
– Embryo defective 2410 isoform 1 [Theobroma cacao] gi|508784096|gb|EOY31352.1|
Domains
5
Lj5g3v0551220.1
– Embryo defective 2410 isoform 1 [Theobroma cacao] gi|508784096|gb|EOY31352.1|
Domains
9
Lj5g3v0551220.2
– Embryo defective 2410 isoform 1 [Theobroma cacao] gi|508784096|gb|EOY31352.1|
Domains
12
LotjaGi1g1v0389900_LC.2
– Embryo defective 2410 protein; TAIR: AT2G25660.2 embryo defective 2410; Swiss-Prot: sp|Q09670|OYEA_SCHPO Putative NADPH dehydrogenase C5H10.04; TrEMBL-Plants: tr|A0A1J7GBQ8|A0A1J7GBQ8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0389900_LC
Domains
5
LotjaGi5g1v0063200.1
– Embryo defective 2410 protein; TAIR: AT2G25660.2 embryo defective 2410; Swiss-Prot: sp|B8DC21|CCA_LISMH CCA-adding enzyme; TrEMBL-Plants: tr|A0A072VNV3|A0A072VNV3_MEDTR Embryo defective 2410 protein; Found in the gene: LotjaGi5g1v0063200
Domains
9
LotjaGi5g1v0063200.2
– Embryo defective 2410 protein; TAIR: AT2G25660.2 embryo defective 2410; Swiss-Prot: sp|B8DC21|CCA_LISMH CCA-adding enzyme; TrEMBL-Plants: tr|A0A072VNV3|A0A072VNV3_MEDTR Embryo defective 2410 protein; Found in the gene: LotjaGi5g1v0063200
Domains
5

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 14.29