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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR008047
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.573s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0085309.1
n.a. PREDICTED: DNA replication licensing factor mcm4-B-like [Glycine max] gi|356538731|ref|XP_003537854.1| chr0 34113337 34118635 -
2 domain predictions
5 GO terms
Lj0g3v0085309.2
n.a. PREDICTED: DNA replication licensing factor mcm4-B-like [Glycine max] gi|356538731|ref|XP_003537854.1| chr0 34113755 34118635 -
2 domain predictions
5 GO terms
LotjaGi1g1v0631500_LC.1
n.a. DNA helicase; TAIR: AT2G16440.1 Minichromosome maintenance (MCM2/3/5) family protein; Swiss-Prot: sp|Q5JKB0|MCM4_ORYSJ DNA replication licensing factor MCM4; TrEMBL-Plants: tr|A0A0L9V779|A0A0L9V779_PHAAN DNA helicase; Found in the gene: LotjaGi1g1v0631500_LC LjG1.1_chr1 118529181 118545786 -
2 domain predictions
5 GO terms
LotjaGi1g1v0722700_LC.1
n.a. DNA helicase; TAIR: AT2G16440.1 Minichromosome maintenance (MCM2/3/5) family protein; Swiss-Prot: sp|Q5JKB0|MCM4_ORYSJ DNA replication licensing factor MCM4; TrEMBL-Plants: tr|A0A1J7GYJ8|A0A1J7GYJ8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0722700_LC LjG1.1_chr1 129396870 129408611 -
2 domain predictions
5 GO terms
LotjaGi1g1v0722700_LC.3
n.a. DNA helicase; TAIR: AT2G16440.1 Minichromosome maintenance (MCM2/3/5) family protein; Swiss-Prot: sp|Q5JKB0|MCM4_ORYSJ DNA replication licensing factor MCM4; TrEMBL-Plants: tr|A0A1J7GYJ8|A0A1J7GYJ8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0722700_LC LjG1.1_chr1 129397768 129408548 -
2 domain predictions
5 GO terms
LotjaGi2g1v0214600_LC.1
n.a. DNA helicase; TAIR: AT2G16440.1 Minichromosome maintenance (MCM2/3/5) family protein; Swiss-Prot: sp|Q5JKB0|MCM4_ORYSJ DNA replication licensing factor MCM4; TrEMBL-Plants: tr|I1LJ93|I1LJ93_SOYBN DNA helicase; Found in the gene: LotjaGi2g1v0214600_LC LjG1.1_chr2 66489828 66502463 -
2 domain predictions
5 GO terms
LotjaGi2g1v0214600_LC.2
n.a. DNA helicase; TAIR: AT2G16440.1 Minichromosome maintenance (MCM2/3/5) family protein; Swiss-Prot: sp|Q5JKB0|MCM4_ORYSJ DNA replication licensing factor MCM4; TrEMBL-Plants: tr|I1LJ93|I1LJ93_SOYBN DNA helicase; Found in the gene: LotjaGi2g1v0214600_LC LjG1.1_chr2 66489828 66502465 -
2 domain predictions
5 GO terms
LotjaGi3g1v0262900.1
n.a. DNA helicase; TAIR: AT2G16440.1 Minichromosome maintenance (MCM2/3/5) family protein; Swiss-Prot: sp|Q0WVF5|MCM4_ARATH DNA replication licensing factor MCM4; TrEMBL-Plants: tr|A0A1J7GYJ8|A0A1J7GYJ8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0262900 LjG1.1_chr3 48654443 48660257 +
3 domain predictions
5 GO terms
LotjaGi3g1v0262900.2
n.a. DNA helicase; TAIR: AT2G16440.1 Minichromosome maintenance (MCM2/3/5) family protein; Swiss-Prot: sp|Q0WVF5|MCM4_ARATH DNA replication licensing factor MCM4; TrEMBL-Plants: tr|A0A1J7GYJ8|A0A1J7GYJ8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0262900 LjG1.1_chr3 48654627 48659910 +
3 domain predictions
5 GO terms