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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR008380
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 12 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.036s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj4g3v2020560.1
n.a. PREDICTED: 5'-nucleotidase domain-containing protein DDB_G0275467-like [Cicer arietinum] gi|502150072|ref|XP_004507776.1| chr4 28078349 28085831 +
4 domain predictions
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Lj4g3v2020560.2
n.a. PREDICTED: 5'-nucleotidase domain-containing protein DDB_G0275467-like [Cicer arietinum] gi|502150072|ref|XP_004507776.1| chr4 28078349 28085831 +
4 domain predictions
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Lj4g3v2238980.1
n.a. Cytosolic purine 5'-nucleotidase [Medicago truncatula] gi|357479189|ref|XP_003609880.1| chr4 30933681 30945116 +
3 domain predictions
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Lj4g3v2238980.4
n.a. Cytosolic purine 5'-nucleotidase [Medicago truncatula] gi|357479189|ref|XP_003609880.1| chr4 30933681 30945116 +
3 domain predictions
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Lj5g3v2298040.1
n.a. PREDICTED: cytosolic purine 5'-nucleotidase-like [Cicer arietinum] gi|502131525|ref|XP_004501012.1| chr5 33839389 33846566 +
4 domain predictions
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LotjaGi1g1v0419300.1
n.a. Cytosolic purine 5'-nucleotidase; TAIR: AT1G75210.1 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase; Swiss-Prot: sp|Q54XC1|5NTC_DICDI Cytosolic purine 5'-nucleotidase; TrEMBL-Plants: tr|A0A0S3RB16|A0A0S3RB16_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0419300 LjG1.1_chr1 91289499 91299043 +
4 domain predictions
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LotjaGi4g1v0292500.1
n.a. 5' nucleotidase family protein; TAIR: AT2G23890.1 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase; Swiss-Prot: sp|Q75K12|NT5D_DICDI 5'-nucleotidase domain-containing protein DDB_G0275467; TrEMBL-Plants: tr|K7MKA7|K7MKA7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0292500 LjG1.1_chr4 66405448 66414334 -
4 domain predictions
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LotjaGi4g1v0292500.2
n.a. 5' nucleotidase family protein; TAIR: AT2G23890.1 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase; Swiss-Prot: sp|Q75K12|NT5D_DICDI 5'-nucleotidase domain-containing protein DDB_G0275467; TrEMBL-Plants: tr|K7MKA7|K7MKA7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0292500 LjG1.1_chr4 66406908 66413948 -
4 domain predictions
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LotjaGi4g1v0292500.3
n.a. 5' nucleotidase family protein; TAIR: AT2G23890.2 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase; Swiss-Prot: sp|Q75K12|NT5D_DICDI 5'-nucleotidase domain-containing protein DDB_G0275467; TrEMBL-Plants: tr|K7MKA7|K7MKA7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0292500 LjG1.1_chr4 66406908 66413948 -
4 domain predictions
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LotjaGi4g1v0314300.1
n.a. Cytosolic purine 5-nucleotidase; TAIR: AT5G48960.1 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase; Swiss-Prot: sp|Q54XC1|5NTC_DICDI Cytosolic purine 5'-nucleotidase; TrEMBL-Plants: tr|G7JR10|G7JR10_MEDTR Cytosolic purine 5-nucleotidase; Found in the gene: LotjaGi4g1v0314300 LjG1.1_chr4 69084538 69094356 -
4 domain predictions
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LotjaGi4g1v0314300.2
n.a. Cytosolic purine 5'-nucleotidase; TAIR: AT5G48960.1 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase; Swiss-Prot: sp|Q54XC1|5NTC_DICDI Cytosolic purine 5'-nucleotidase; TrEMBL-Plants: tr|A0A151SSF2|A0A151SSF2_CAJCA Cytosolic purine 5'-nucleotidase; Found in the gene: LotjaGi4g1v0314300 LjG1.1_chr4 69084538 69094356 -
4 domain predictions
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LotjaGi4g1v0314300.3
n.a. Cytosolic purine 5-nucleotidase; TAIR: AT5G48960.1 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase; Swiss-Prot: sp|Q54XC1|5NTC_DICDI Cytosolic purine 5'-nucleotidase; TrEMBL-Plants: tr|G7JR10|G7JR10_MEDTR Cytosolic purine 5-nucleotidase; Found in the gene: LotjaGi4g1v0314300 LjG1.1_chr4 69084939 69094192 -
4 domain predictions
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