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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0292500 |
| Transcript ID | LotjaGi4g1v0292500.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 5' nucleotidase family protein; TAIR: AT2G23890.2 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase; Swiss-Prot: sp|Q75K12|NT5D_DICDI 5'-nucleotidase domain-containing protein DDB_G0275467; TrEMBL-Plants: tr|K7MKA7|K7MKA7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0292500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:66406908..66413948) extracted from Lotus japonicus Gifu genome v1.2.
AACACTCACTTACTCACTCTTCTGTTTCCACTGTCACAGGGTTCCACGCTGATTTCATCTTCTGCACTCCAACAAGGTAT TTTTCTTATCATCAATCTACTTCATTTGTAATGCTTTCATTGATTCACAAAAAGAGATTCATTATGAATTGTTGAAATGA AAATCTCGCTTTCATTGATTCACAATTTCACACTCTTTCACGGTTTAGGGTTTTCGCGAAGCTACAGCGTCATTGAATCA TTGGAGCAGTGTGCGTCGCAATCTGATGATGAGGAGATAGCCACTCTCCGTCGCGAATACGAAGCTGCCAAACAGAGTTT TCTTAAGATTCCTGATGCACTCAAACAAATGCCCAAAATGAATCCCAAAGGTTCATTCATTGCTTCAACAATTAATGAAT GTGTGTGTGTGTGTGTTTTTTTCTTTGTGCGTGTTGATTTGATTCTGTTCTCTTTTCGGTGTTTTGGATTAGGCATTTAT GTGAATAAGAATCTGAGATTGGACAATTTGCAAGTTTATGGGTTCGATTACGATTACACTTTGGCACATTACTCGACCCA TTTGCAGACTCTGATATATGACCTTGCCAAGGAGTATATGGTTAATGAGGTTAGCTCCAATCATCTGTCTCGGGCTGTTT GTTTTTACAACTGTGGTTGTTCGTTTTCTTACTCTTTTTGTTGCTTATTTCAGCTTAGGTATCCAGAGATTTGCATGGGT TTTAAATATGATGCAGCTTTCCCCATTAGAGGACTTTGCTATGATAAGTCAAAAGGGTGTCTCTTGAAGCTGGATTTCTT TGGTTCAATTGAGCCAGACGGATGCTACTATGGTAGACGAAGGGTATTTGGCTCTGATTCTTTATTGTCTTGGATTTGTT TTTCGTAACTTCTTATGTAAGATTGCATAATGGACATGTTGAGATGCTTGTATTGATGAATAGCGGCTTACTTAAATTTG ATAAACTTCTTTTAGCACTATTTGTCCATTGTAACAGAAATGATGATTGATGAATTACAAGTAAAATGTTTTTTACATAG ATTACTTTCTTTCAAATAACTTTACAGCTAAGCCCAAAGGAAATACGTGATATATATGGCACACGGCATATTGGTCGTGA TCAAGCCCGATCACTTGTTGGTTTGATGGATTTCTTCTGCTTTAGTGAGGTCAGTTCCCCGTCACCCTTTCATTCTATGA TAATTATCTGGTTAATGGCTAGAGGACCTTTGGTACTGCCCAGTTTTGGAGCTTTGCCTTATTGAAATTTCATGCCATGA GTCTTGTACTTTTCTTCAAATGTTACAGAATTTTATTCATATCATTAAGTTACATAGACAAGCTACCATTAACATACCAC CTTCAAAATTCATCCTGAAGGGACTGCTACAGTATCTTTCCCTGTTTCTGAACCCAGTATACTTGAAGAAATGGACATGT GGACCACCATTAGATCTCTGTTTATTATTACCTTGCAAGAGATGAGAAATAGCACCAGGAGTCAGGATTGAATCATCTTA GTTTATGAAGATTACTGCTTATATAATGCATAAAAGAATGGAAATAGAAATTAGCTGGAAGTAATTTGATAGATTTTGTT CCTCATAGGATTGTTTATGTTATTTTCAAAGAAAAAATGTTTAAAAGAATGGAAATAGAAATTAGCTGGAAGTAATTTGA TAGATTTTGTTCCTCATAGGATTGTTTATGTTATTTTCAAAGAAAAAAAGTTTAGGTGAATTTTTTTTATGATAATTAGA CGAGTGTCTTTTAAGAAAAGCAAGCACTCTGGAAAAGCAGTTTGAGTGTTTTTTTTCAGAACTAGAAAAAGTAGCTTCAG CAAAGTAGCTCTGAAAGAAGATATTATCATAAAAGCATTTACTAAAACAAACTAATGCAAATGCACCCTTAATCAGACTT GGCCTATTATACAGAATTCTAAAATTACTCTTGCTTCTTCAATCGGTCATTTGTTCTGTGACAGTTACACTAACAATTTT ATTGGTTTCCTTCTGGTTAAACTGAGTGCAATATCTACTGCATACCTAAGCAGGTCTTTCAGACTGTTAAGCTAAATCTC TACTACCGAGGCAGGAGTTGGTTCCCAATGTCTTGAAATTATAAAACTTAAACTGAAGGCCAAACTCTTGCAATGCAGTA CTGATCCCTCTGAAATTTGAAAATTCTCTTGAAAGCTTAAACTCTCTTCCCTTGCCAATTTCATTTGCCACGTCCTGGGT AGCCTATTGTGAAGCCTCTTGCTGCCGTAAAATCTTAGGTTGAGAATTGATTGTTTATATCACTACTCTGCAGGCATGCC TCCTTGCAGATATAGTGCAATACTTCGTTGATGCTAAGCTAGAATTTGATGCTTCCTACATTTATGAAGATGTTGTTCGT GCAATTGAACATGTCCACCGAAGTGGCATCGTTCATCAAGGAATTCTCTCTGATCCACACAAATACTTAGTTAAAAATGT AAGTTCAAACCATTTTACATATTTCTATTAAATGTTTTTGATGAATGTGTGCAACAGATGCTGCAATAAGTTGTCTACAA AAATTTCACAAACCTAATTCAGGATCTAGTATCTTAATAAAGTTTTTTTTTGTCTATCTAATATCAAAGTACACATTGTA TCTTAATGTGGTTGTATTATCGAATCGAGTTATTTTATTGTCTAGTTGAAAGTTTATCGTTATTATTTATCTGTTGGTGA ATATTTCAGGGAAAGATATTATGTTTTCTTAAGATGCTAAGGGAGAGGGGGAAGAAGCTTTTCTTGTTGACCAATTCTCC TTATCACTTTGTGGATGGAGGGATGCGTTTTATGTTAGAGGTATTTGATTAACTGGAATTCATATGACACGTTTTGTTTA TATCATGCAATGTTTTTCTTTAGCCTTCACAGTACTTGTTAGAGTTTAATAATTTTTTTAGTTTATTTTTCTTAGTTTGG AAAGTTGCATGACCCAGTTATTGTCAATTTGGGTCAGTCGGAGCTCCAACTCTAAATACTTCTTGTTTCTTTTATCCTCT TGCATGCTGGAGTTATGTTTTATCAGTTAGATGGTTAACATTGACACTAGCTGTCAGGTCTTTTTTAATGTTTTGTTAAA AGGTCCTTACTTGGTTTTTAATATAATATTTGTTATATATTACTGTTTTTCACTTTTCATATCTGGCCATATTTTCCTTG ATTTTATTCTTAAATGTTGATTAGGATTCTATGGATTGTAGAGACTCCTGGACAGAACTGTTTGATGTTGTGATTGCTAA GGCAAATAAACCACAGTTTTATACATCTGAGCATCCATTCCGGTTTGTATCGTATACATCCTATGTGATATGGTGTTCAT TTTTTATACTCATAATTCTTTATATTCTTACTTTTTTTATGAAGGACGACTGGGATCATTGTGCTACATTTTAAATAGTT CAAAACTGACTTTAGGACTAGATTGTTCGGATATTACTCTGTTTTGAATTACAGTAATTAATGGCAAATGAAGTAAATGA TTGAGAAACAAATAAAATTTGAATCTTAAAGCAATTGAGCATAGTGTGGCTGGATGTAAATTCTTCTCATGCACAAAGCT AATCTGTATCATTTTCTTTTGTCAAGTAATTTTCTCCTCATCATTTCTAAAATCCTGAATTCTTTGTGAGGTCTTAAATG TCACTGGCTCTTTCATGCAGTTGTTATGACACACAGAAGGACACATTAACTTTTACCAAGGTTGATAAATTTCATCAAGA TAAAATATATTATCATGGATGCCTCAAATCCTTTCTTCAAATAACCAAGTGGAAAGGCCCGGAGGTATGCTTTTATTTGA TGTTTGATAAACCACACTTCATATTATTTTGATTTACTTAAACTTTACAATTAGTTTTATTTGCAGAGCAAATACACAAT TTTGCATTAAGATTCATTCACAGTATTGGGCTATGATAGTTGAGCTACACTCCATGTACAGAGTAATATATATATATATA TATGGAAGTTGTAGTCAGTTAGTGCCGACTGTAAAGTTAGTTACTAGTCAGTTTAGGCTGTTATAGTTCAAGTGCAGAGA CTCCATTATAGTTGTATGACTTGTATCTGTAATAATTCTATCAATAATAAACTCTCTCTGTTCCTAAACCATCGTTACAC TTGAAGCCCCTAGAATGATAAAATTCACACTTTCCATTAGGTGATATATTTTGGAGATCACCTATTTAGCGACTTAAGAG GGCCCTCAAAGGCAGGTTGGCGCACCGCCGCCATTATACATGAACTGGAGGTATGTCTGCTATATAATCCATTTTCATGT AGATTGTTTAACTTGCTTGTCAGTATCTTCCATGAATTTCTTATAGATAGATGAGTTGGCATAACTCCTTAATAGATCCA TACAACTCCCAGGAAAACAGGCTAATGCTATATTATTATTTATTTCCTGTCTGCATATATACACATGTTTAAACATTTTG TATGGTCAGGCCTCTAGTGAGGTTGGTTCCTTTTATAGTATTAATGATGGCTCTTTCATACTTGCTTGTGTTTGTTAAGC AGAAATCCAATTATGTTATTAGCTAGTTTATATTGGAGGCTTTCCTCTCTCATCAGCCTGGCTTTTGAGAGTGGGTTCTT CTCTAGAGAAAGATTCTTCATAGTTGTTTATCCACTGCCAGTGGGTATGGACTACTCTTTATATCTCGTCCTGGCTGGAT GGGAGAGACACAGCTCCTGTTAAAAGCAAAGCTCTCCCCTCTCATCGGTCTGTATCAGATGGCTTTATGTGATCTTCAGT TGTTTATGTATGCTGCCAACTTAGACAGTGACATCCTCCTTCAGTTGTTATTATATATGTATGTGATCTTCAGCTGTTAT TAAATGTACATTGTCAGCTTAGACAATGACGTCCTCCTTTGAGAATGTGCTAATAACTGGTTGCCATAATTATTGTGCCC TCTTCTCATGAATTTAATTTCTCTCCTTTTTCTGGCAAATGATTAATTCCCCTAAAGACTTAAAACTGGTAGGTCCAGAC TCATGTTTGGTTTTATATCTAATATTGTTTCAATAAAGAACCATCATTTACTTTGGCATATCTTTTAACTAATCAGTGTG TTTCACTTGATTATGTTGTAACTGACGAAGCTGCATTCCTTTCACTGGTTACTTTAGCTGTCATGTGGTGTTGTACAATT TGGTTCCTAATCAAAAAGCAAAACATTTTCTGCTATTGATATGAAAGCTAACCTTTGGAAAAATAGAACTTACAGTTCTT TGTGTGTTCATGGTGGTGAATGTTAGAAACACAGTAGTTGAACTTGAATGTTCAAAGTCCCTGGTGAACGCTAAAAGATA TATGAAATTATGATTCGAAATTTTATTTAGAAATGTTAATTTTGTGCTTGCAGAATGTTTCTTTGATGATCTATATCATC CTTCTTGAGTTACTGATGCATCATGCATGTAGAACTTTTGTCATAGTTAACATCAGAAACATAGACATTCTTATATGGAT TATTTCTTTAATATTGCAGAATGAAATACAAATACAAAATGAAGATACCTACCGCTTTGAGCAGGTATCCTTAATATCTT GTTACATATGCCTTTGATGGTTTTATGTTACTTTCTGTAGGTGGTTGTATTAAAGGTTAACCAACTAAAAAAACTTTATG ATTATGTTATCCGCTTGAGGAGTGAAAGATTCAATGAAAATTTGGAAACAGTAGTCAATGGAAATTGAAGTTATTTATCT TGAAAACAAAGATTGATTTTATTAGAGGATACAATTATTTTTTCCCTAAGAGTTCAATGGGAATCTAATTGTTTGTTTCC TTTTCTTAGTGAGTATTAACACGCAAATTACTAAATTATTGTTTTTCAAATAAATTGTGTTTTTGTTAAAGCTGACTCAT TCTGTTCATCATCAACAACCGAGCCAAACTTATTTTTACCAAGTTGATTGCATGTCTGATCTATGAGTCGCTTTGACCAA TTTCATGGCTGGTTCCCAAGTTAGCTGGTCTGACGGGTTGGTCCGAGCTGAATTTTTCAACACTAGTGATTAGTAATATG TTAGCATTTATTATATAGAATTGAGTCAACTTTATGATTGTCAACCCATTTTTAAGCTTGCTAAATGTTAATATGTTATT GTAGATGGATGATATGAAAATATTAATTGAAAAGATGAATTGCAACGTGGTGAAATGCTAGAACTATAAATAAAAACAAA AATCAAATTAGTTTAGTTTTCTTATTCATGTAGGTAGTTTGTAACTAAATGATAACATATCCCCTGTCTTCCACTTAAAT TGTAAGATGTTTTGTTTTGTTAAATTATAGACATTTGGACATTGTGGAAATTGGTACAACCATAAAAGTGATCCACTGAA GTCGCATCATGCATTAAATGAATTGTTTCTATTGTTATTAGAGGTCCATTTTTGGTTGATAAGTAACACTGTAATTGCTT TCTTCAACTGTATATTAGCGATGCACATTTTATGCGGTAATATTTTGTTGAACTATGCAGGCAAAGTTTCATATAATACA GGAGCTACTCGGTAAGTTGCATGCAACTGCAGCTAATAGTCTGAGAACTGCAGCTTGCAATTCGCTTCTGGAAGAACTTA ATGTGGAGAGACTAAAAGCACGCAACAAGATGAAGATGATGTTTAACAGATCTTTTGGAGCTACATTCCTAACTAGCACA GGGCAAGAATCTGCTTTTGCTCATAACATTCACCAGTATGCAGATGTTTATACCAGTAAGCCAGAGAATTTTCTTCTCCA TTCACCTGAAGCATGGCTTCATGTTCCGTTTGATGTCAAGATCATGCCTCATCATGTCAAGGTAATACATTCTTCTTCAT AAATGTTATTTATGTCGCCAACCCCATACTCTTTTTCTCCAAACAAAACTGAAAAGAAAATTCAACATCTTGTTATCCCA TGCTTCCTCGTGCATTTCTGTAACTCCTTGGTTGTTTATATGTTTTTCCAGGTTGCGTCAAATTTGTTCAAAACTGGATG A
CDS sequence (LotjaGi4g1v0292500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCCAAAATGAATCCCAAAGGCATTTATGTGAATAAGAATCTGAGATTGGACAATTTGCAAGTTTATGGGTTCGATTA CGATTACACTTTGGCACATTACTCGACCCATTTGCAGACTCTGATATATGACCTTGCCAAGGAGTATATGGTTAATGAGG TTAGCTCCAATCATCTGTCTCGGGCTGTTTGTTTTTACAACTGTGGTTGTTCGTTTTCTTACTCTTTTTGTTGCTTATTT CAGCTTAGGTATCCAGAGATTTGCATGGGTTTTAAATATGATGCAGCTTTCCCCATTAGAGGACTTTGCTATGATAAGTC AAAAGGGTGTCTCTTGAAGCTGGATTTCTTTGGTTCAATTGAGCCAGACGGATGCTACTATGGTAGACGAAGGCTAAGCC CAAAGGAAATACGTGATATATATGGCACACGGCATATTGGTCGTGATCAAGCCCGATCACTTGTTGGTTTGATGGATTTC TTCTGCTTTAGTGAGGCATGCCTCCTTGCAGATATAGTGCAATACTTCGTTGATGCTAAGCTAGAATTTGATGCTTCCTA CATTTATGAAGATGTTGTTCGTGCAATTGAACATGTCCACCGAAGTGGCATCGTTCATCAAGGAATTCTCTCTGATCCAC ACAAATACTTAGTTAAAAATGGAAAGATATTATGTTTTCTTAAGATGCTAAGGGAGAGGGGGAAGAAGCTTTTCTTGTTG ACCAATTCTCCTTATCACTTTGTGGATGGAGGGATGCGTTTTATGTTAGAGGATTCTATGGATTGTAGAGACTCCTGGAC AGAACTGTTTGATGTTGTGATTGCTAAGGCAAATAAACCACAGTTTTATACATCTGAGCATCCATTCCGTTGTTATGACA CACAGAAGGACACATTAACTTTTACCAAGGTTGATAAATTTCATCAAGATAAAATATATTATCATGGATGCCTCAAATCC TTTCTTCAAATAACCAAGTGGAAAGGCCCGGAGGTGATATATTTTGGAGATCACCTATTTAGCGACTTAAGAGGGCCCTC AAAGGCAGGTTGGCGCACCGCCGCCATTATACATGAACTGGAGAATGAAATACAAATACAAAATGAAGATACCTACCGCT TTGAGCAGGCAAAGTTTCATATAATACAGGAGCTACTCGGTAAGTTGCATGCAACTGCAGCTAATAGTCTGAGAACTGCA GCTTGCAATTCGCTTCTGGAAGAACTTAATGTGGAGAGACTAAAAGCACGCAACAAGATGAAGATGATGTTTAACAGATC TTTTGGAGCTACATTCCTAACTAGCACAGGGCAAGAATCTGCTTTTGCTCATAACATTCACCAGTATGCAGATGTTTATA CCAGTAAGCCAGAGAATTTTCTTCTCCATTCACCTGAAGCATGGCTTCATGTTCCGTTTGATGTCAAGATCATGCCTCAT CATGTCAAGGTTGCGTCAAATTTGTTCAAAACTGGATGA
Protein sequence (LotjaGi4g1v0292500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPKMNPKGIYVNKNLRLDNLQVYGFDYDYTLAHYSTHLQTLIYDLAKEYMVNEVSSNHLSRAVCFYNCGCSFSYSFCCLF QLRYPEICMGFKYDAAFPIRGLCYDKSKGCLLKLDFFGSIEPDGCYYGRRRLSPKEIRDIYGTRHIGRDQARSLVGLMDF FCFSEACLLADIVQYFVDAKLEFDASYIYEDVVRAIEHVHRSGIVHQGILSDPHKYLVKNGKILCFLKMLRERGKKLFLL TNSPYHFVDGGMRFMLEDSMDCRDSWTELFDVVIAKANKPQFYTSEHPFRCYDTQKDTLTFTKVDKFHQDKIYYHGCLKS FLQITKWKGPEVIYFGDHLFSDLRGPSKAGWRTAAIIHELENEIQIQNEDTYRFEQAKFHIIQELLGKLHATAANSLRTA ACNSLLEELNVERLKARNKMKMMFNRSFGATFLTSTGQESAFAHNIHQYADVYTSKPENFLLHSPEAWLHVPFDVKIMPH HVKVASNLFKTG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 61 | 61 | 4.0E-17 | ||
| SUPERFAMILY | 5 | 482 | 478 | 1.04E-118 | ||
| PANTHER | 5 | 484 | 480 | 8.6E-225 | ||
| PANTHER | 5 | 484 | 480 | 8.6E-225 | – | |
| Pfam | 9 | 54 | 46 | 3.7E-14 | ||
| CDD | 10 | 360 | 351 | 4.67435E-138 | – | |
| PIRSF | 71 | 491 | 421 | 7.5E-134 | ||
| Pfam | 78 | 482 | 405 | 5.7E-119 | ||
| TIGRFAM | 81 | 374 | 294 | 3.9E-106 | ||
| Gene3D | 192 | 386 | 195 | 3.3E-48 | ||
| Coils | 406 | 426 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0292500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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