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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR008733
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.661s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v2613720.1
n.a. peroxisomal biogenesis factor 11 family protein [Glycine max] gi|351723775|ref|NP_001235755.1| chr1 30357016 30361968 -
2 domain predictions
2 GO terms
Lj3g3v3640180.1
n.a. PREDICTED: peroxisomal membrane protein 11B-like [Cicer arietinum] gi|502146199|ref|XP_004506346.1| chr3 44396408 44397771 +
2 domain predictions
2 GO terms
Lj5g3v0086230.1
n.a. PREDICTED: peroxisomal membrane protein 11A-like [Cicer arietinum] gi|502125960|ref|XP_004499131.1| chr5 603409 605549 +
2 domain predictions
2 GO terms
LotjaGi1g1v0468800.1
n.a. Peroxisomal membrane protein 11 homolog; TAIR: AT1G01820.1 peroxin 11c; Swiss-Prot: sp|Q9LQ73|PX11C_ARATH Peroxisomal membrane protein 11C; TrEMBL-Plants: tr|I3T2M9|I3T2M9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0468800 LjG1.1_chr1 97950022 97955613 -
2 domain predictions
2 GO terms
LotjaGi1g1v0468800.2
n.a. Peroxisomal membrane protein 11 homolog; TAIR: AT1G01820.1 peroxin 11c; Swiss-Prot: sp|Q9LQ73|PX11C_ARATH Peroxisomal membrane protein 11C; TrEMBL-Plants: tr|I3T2M9|I3T2M9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0468800 LjG1.1_chr1 97951255 97952894 -
2 domain predictions
2 GO terms
LotjaGi3g1v0545000.1
n.a. Peroxisomal membrane protein 11 homolog; TAIR: AT3G47430.1 peroxin 11B; Swiss-Prot: sp|Q9STY0|PX11B_ARATH Peroxisomal membrane protein 11B; TrEMBL-Plants: tr|A0A1B5Z789|A0A1B5Z789_TRISU Uncharacterized protein; Found in the gene: LotjaGi3g1v0545000 LjG1.1_chr3 96112946 96113829 +
2 domain predictions
2 GO terms
LotjaGi5g1v0018500.1
n.a. Peroxisomal membrane protein 11A; TAIR: AT1G47750.1 peroxin 11A; Swiss-Prot: sp|Q9FZF1|PX11A_ARATH Peroxisomal membrane protein 11A; TrEMBL-Plants: tr|A0A0L9TT59|A0A0L9TT59_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0018500 LjG1.1_chr5 3567774 3570596 -
2 domain predictions
2 GO terms