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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0468800 |
| Transcript ID | LotjaGi1g1v0468800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peroxisomal membrane protein 11 homolog; TAIR: AT1G01820.1 peroxin 11c; Swiss-Prot: sp|Q9LQ73|PX11C_ARATH Peroxisomal membrane protein 11C; TrEMBL-Plants: tr|I3T2M9|I3T2M9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0468800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:97950022..97955613) extracted from Lotus japonicus Gifu genome v1.2.
TGAAATGCGTGTTGCCACTTGCAAACCCAAATCTGTGAGGGAGTTTAGAAAACACTGATTTCTTCTTGTAATCAAACGAA GCAGATTTGGAGTTGCGAGTTTGAACGTGTGACCCGTTGACATCGGACTCATCGAACGGTTGGAGACTGTTCCATACGAG GGTGACAAAACCAAACCAGAGAGAGCACCATAATAATCCATTTTTTGTTTGTTTGTTTGTTTCGGGAATCTGAGAACCAA ACAAGCCCTTATCATAACTCTATCTATCTTTCTCAGGCCCAACCAAACCATTTCCTTCTTCCTTTCTTCTGTCATTCATT CTCATTCTCCTTCGTCACTTCGTTCGGTACTCTCTCTTTCTCTTTCTATCTACCTCTTTGTCTTTCTTTATTGCTCGTTC TGCATGCTTTTTCTTTTTTTATATATTGGCTAATAGACCAGGAAATTCACGTGCCCATTTGTTTCATCATTTGACTTTGT ACCTTGAGATTCAAAAGTTGCGATCTTTCCAGGTGGGGTTTGCAAATTTTGATTTTGGGTCAGCTTGATTTGATTCTGAA TTCAGGTTGTTTGTTTGAATTTTATGATTTGCTTTGATGGTTGTTGGTGAAATGATAATACATGATTTTGATGTGATGTG GTTGTTTGTTGTAATATAGGAAGGAGATTGGTGTAACTGGACTAATAGGTAGTAGTCCTGATACATCCATGTTATATTCT CTTCCTCTCTTTGATTGAATCAAGCTTATTGTTTTGACAATTTGAAATTTAATCCTGATTCATGGATTAGATGTTTTTAT GATCCCTGTCTTACTCAAAATATAATACTGTGGGTTTGATTTGTTGAAAGCTGTTTGAATTGTTGGTTTATTTTTGTTAT GAGAGCAACTTGGATGTTGATGCTCTTGGATTTGCTCATTCATTGGTTTCAATTTTTTTTCCTGGAGACATGAAGTTTGT TCTTTTAGGTGAACATTGGTCGATATCTTCTGTACACTTTTACACTTGTAAATAACCCTGTCTTCCCTTTTATGTTTTTG GCCTTTAGAGTGCCTTACTAACTAGCCTGTTCTACTGAAGCTAGCTAATGCTAGAACTAGTGAATCATGCAGCTGTCTAT ATCTTGGCTGTAAAGCAGGACTTGATGATGACCGTATTTTTCTCATGAGATGGAGAACATCATGGTTTTTTTATTATAGA TAGAAATTGAAGCTTTTCCATTCCCCCTTAAAAATTTCTCTAATTCTTATTTGGATATGGAAGCTGAGTTGAATATTATG TATTGTAGAGTTTCAAGAATACCTTCTAAACCTTTTCTTAGTTTTTGAGTTAGGCCTAACTCAACCCTAAAATATAGCAT ATGGGATGAGTATTTTATTGTTCTCCGACCAAATTAACTCATCCTTGATATGATGAATAAAATGTTGCAAATTTGAGGGG ATATGTGTGTGCAGCAGGTTGACAAAAAGTATATCCTATACAACAAAAAAGGGTAGAACCTTCTACATTATTTCTATTGT CTGCCCAATTTTTTACCTTCTTTCTGAGCATTGAAGCTATTGTAGACTTGTAGTTGAGGCTTGTTGCTTGCATGCCCAAT TAGTTAAAATTGGAAGTTTACAGTTTGGCTTTAGTTGTAGTTGAAGCATGTATGTTTTGTTCATAGAATGAAGGCTGAGG ATAAATGAGAGTAAAAAAAGGAACACCAGTTTGCTAGTACATTGAAATGTAAAGAAGTTCAATCCTTTTCCTTTGTGTTT TCACTTTTTCGTGAGATATCAATGGAATTTTACGATTGGATTTTATGGCTCAAACAAGTGAATGACTCTTGGATAGGTGG AAAGGTCCACTAGATTATTTTGCCAATGTTGTGCTTATCATACTTTCTTGATCTTGATGGAGTTTTTATGGAAGTGCTGA CTTGTTGTTTCTAGAAAGATTGTCATATATTGAACACATTTTGATACTATGTGTTAAGGTCCCACATTGACTGGAGAGTG GAGATATTGCTAAGCAAGTCTTTATAAATGATAGAACAACCCTTACCCCTAAGATATCTTTTGTGGTAGAGTTAGGCCTA GCCCGTTCTCTAAGATGGTATCAGAGTCAATTCTAGATTGTTATTGGTCCATCCATGATGGGCCACCCGTTGAAGTTTGA AGTTCAAGGATCAACCTAAGTCGCAATTGTTTTAAGAAATATTAATGAAATCAATCTAGACGGTGGTTATTCCGGGATAA GTTGATGAAAGTTAATATGCACCGTAGAAATATGTCCTATGATGGGCATTTGGTTATAACCACAAAATATCAAGTTTGCA ATCTCCACGCTCTAGATATCTAGCGCTGGGCGTGGTGTAGAGTTATGACTAAAGAAGTTCTTTTAAAGAATAGTGCAATC CTCGCCCCTAAGCTAGCTTTTGGTGTAGAGTTAGACTTAGCCCAAATTCTAAGACTATCTTTGTACTTGGTCCTTTTTAA TAAGAATGAAATTGCATTCCTTTCTAGTTGATTAGTTTAACAATTTAATTGGTACTCCTTTATCTGTTTTTGGGGGAAAA ACTCTTTACACATGTTGCTATATAAATTAAGATTTATACATCTACAACTTTTTTCCCTCCCAATTTAATATGACAATATC ACATTTTGCTTTCATGTGTTCACTGGATTTTGTTGAAATGAACTGTGCTGTGATTTTGTGACATTGCAGTGATTACTAAT TAGCACCGAAAATGAGTGCGTTGGATACAACTAGGGCAGAACTTGGTCTTCTTGTCTTATATTTGAACAAGGCTGAAGCA AGGGACAAGATTTGCAGAGCAATACAGTATGGTTCCAAATTTTTGAGCAATGGTGAACCTGGTACTGCCCAGAATGTTGA CAAATCAACCAGCTTGGCACGAAAAGTTTTCCGTCTATTTAAGGTAAGTTTACTTTTTATTTCTGAAACATGCTAGTTCA TCCGTTAACTTCTTTTTTATTTTGGTACTCACAATGTATAATGGGATTTCTCATTTGTATCAATTTCTTTGTGTATACTG TATCCCCTTCGATTGATTTGTTCAAAAAAGACAAGAGATCTGTTATATACATAATAATTTGTTATTTGGTTTCTGAGGGA GGACATAATTGGAAAAGGATAAATTGGAGAATGTCTTGCATTAGTCAGTTATCCCCATCCCAAATTGGAGGGCATATTTG TTATACTGTATCCCCTTCATTTCTTTTGTTTAGTATTAGTCAGTTATAAAATCAAATAAACATTTGGGCATAGAAAAGCA TGGTACAATTGATTAGTTCATGTAATAACCACCACTCATTGTATTTCTAATGCGCAGTTTGTCAATGACCTGCATGGTCT GATAAGTCCAACACCACAGGGTACTCCCCTCCCCTTGATTCTGTTGGGAAAGGTATGAGAGTTCTAAGAACACCTATCAC CTTTTCATCTTTAATTCATTTTCCTAATGTGTTAATTGATTTTTTTTTCAGTCCAAGAATGCATTACTCTCCACTTTCTT GTTTCTTGATCAATTTGTGTGGCTTGGTAGGACCGGCATCATCGAGGTAGGAAATACATGTTTTCATTGGCAACCTTTTG TTTATTTCTGTTTTATTATATCGGGAATACCATCCAGCAATATACAACAATTGTGTTGCTGACTACAGAACAAAGAACGT ACCGAACTACTTGGCCGGATTTCTCTTTTCTGTTGGCTGGGTTCCTCAGCGTGCACCACCTTGGTTGAGGTTTGTTCCTT TCCTGCTAAAACGCGTGCATCAATAATTCCCTCTTATTTCTTCACTTTTTTTAACCTTTGTATGACATGTTTTACTCATT TGATCAGCTCGGGGAGCTCGGAAGACTCTCTACATCAATGAAGAAGTTAGAGAAAGAACTCAAAAACACTAACAAATATG ATGTATGTTGTCCATGCTAGTGTATAAATTCTTCAAAGTTCCGCCTTTGGTGGATTTCAACCCATGATTATCTTACTTAT TTGTGGACTCATTACCTGTGGGTGCAGAATGAGCAATACCGCGCCAAGCTACAGAAGTCAAATGAGAGGACACTAGCACT TGTCAAAGCAAGCATTGATATAGTGGTAGCAGTTGGACTGCTTCAATTGGCACCCAAGAAAGTCACTCCTCGTGTGACTG GAGCATTTGGATTTGTTTCATCTCTAATATCTTGCTATCAGGTGCCTGCTAGTATAGTTATATTTAGATTTCTACATGCT TTTATTCTCATTGGGTGGATGAAGTCCCAAAATAGTTGTTTGTTTTATTCCTTATCAGTTTTTTTGATTTAAAAACCATT TCCAGAAACCAGTTTACTAAAAGGAAAAAAACTGCTTAACAAGATGTTTTGGGTTGAAAAACCTATGACTTGAAAATAAT AACAAAAGCAGTGAACGTCTCCGGTGTTTTGCAAATTTAGTTTTAAAAACTATAAACAAGAACAGTTTCTATGATCAGTT TTTCAAAACTGTTCCTATCAAACAAGTTTTTCTCTTTTATTGTATTTTGAAAAACTGAAGATTGTTTCATAAAACAGTAA TCAAAAGGGTCCTTTTATGCCCTATCTGTGTACATATACCTTTTGCACACAACTAAGGAACAAGAAGCTAGAGTTAGAGA CAAAACTAGCACTTGGCAGTTATGCTGAAGAGCAGAACAAATGTGTTAGCAAGGTTTATAATTATTTCAGTTTTTCAACA GAAAAAATGCGTGTCCCTCTAGATCAGTGGAGGGTCATGGATTTTCTTTTGTGCTGCAAATTTTCTTAGAAGTGTTACTT TCACTAACAAGGATCTCTGGTTTGTTCAATGCAGTTGCTTCCTGCCCCAGTCAAGTCTAAAACATCTTAAACATGGAAGA ATAGACTGGTTCTCGTCATGCTTCATCGTTGTTAAATAATTATATGAATTTGTCAGGAAATGTTGATTGGTATGAACATA GACCAACTTTCCTCTTAGTAGAAAACAATGGCATGTTTAAGATTGTCTTCAGAAAACCTTTACATTGTTTGGAGTATGTG TCTATTTTGGTCTAAAGATATATGCAACATCAAATTAGTTTTTCATGTTTTGTTGTCACCAAATGAATCCTTCAAATGAT ATCAAATTGGTAATGGCATTGAATTTATTATTAACCAATGTGCTAAGAACCTTGGAAGAATCACACCACAAAAGTTAGTT GTTGTAGTTCTAGAGCCCAAGACCTTATAAACCCTACATTAGAATCTCATGCTTCCAATGTGGGACTCAAGTCTCATACC ATACAATTAAATTCTAACATCCTACCACGCTCCGTGACCCTGGTGCCCACACGGGATGGTTGTGCACTAGCCCTGAGTGA ACATTGCAATGTCGGCGTCACCACCCACACCGCTCGTGGAAGACTATGATACTAATTGATAAGAACATTGGGACAAGCAA ACCACAAAAGCTCATTGTTGTAGTTGGAGAGCCCAAGGTCTTATAAACCCCACATTAGAATTTCATACTTCAAATGTGGG ACTTAAGTCTTATACCATGCAGTGAGGTCCTAACACATAGTTAGGTCTGTGTGTATTTTCATCACATTTTTT
CDS sequence (LotjaGi1g1v0468800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTGCGTTGGATACAACTAGGGCAGAACTTGGTCTTCTTGTCTTATATTTGAACAAGGCTGAAGCAAGGGACAAGAT TTGCAGAGCAATACAGTATGGTTCCAAATTTTTGAGCAATGGTGAACCTGGTACTGCCCAGAATGTTGACAAATCAACCA GCTTGGCACGAAAAGTTTTCCGTCTATTTAAGTTTGTCAATGACCTGCATGGTCTGATAAGTCCAACACCACAGGGTACT CCCCTCCCCTTGATTCTGTTGGGAAAGTCCAAGAATGCATTACTCTCCACTTTCTTGTTTCTTGATCAATTTGTGTGGCT TGGTAGGACCGGCATCATCGAGAACAAAGAACGTACCGAACTACTTGGCCGGATTTCTCTTTTCTGTTGGCTGGGTTCCT CAGCGTGCACCACCTTGGTTGAGCTCGGGGAGCTCGGAAGACTCTCTACATCAATGAAGAAGTTAGAGAAAGAACTCAAA AACACTAACAAATATGATAATGAGCAATACCGCGCCAAGCTACAGAAGTCAAATGAGAGGACACTAGCACTTGTCAAAGC AAGCATTGATATAGTGGTAGCAGTTGGACTGCTTCAATTGGCACCCAAGAAAGTCACTCCTCGTGTGACTGGAGCATTTG GATTTGTTTCATCTCTAATATCTTGCTATCAGTTGCTTCCTGCCCCAGTCAAGTCTAAAACATCTTAA
Protein sequence (LotjaGi1g1v0468800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSALDTTRAELGLLVLYLNKAEARDKICRAIQYGSKFLSNGEPGTAQNVDKSTSLARKVFRLFKFVNDLHGLISPTPQGT PLPLILLGKSKNALLSTFLFLDQFVWLGRTGIIENKERTELLGRISLFCWLGSSACTTLVELGELGRLSTSMKKLEKELK NTNKYDNEQYRAKLQKSNERTLALVKASIDIVVAVGLLQLAPKKVTPRVTGAFGFVSSLISCYQLLPAPVKSKTS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 231 | 231 | 7.0E-138 | – | |
| Phobius | 1 | 180 | 180 | - | – | |
| PANTHER | 1 | 231 | 231 | 7.0E-138 | – | |
| Pfam | 13 | 225 | 213 | 7.1E-50 | ||
| Coils | 145 | 165 | 21 | - | – | |
| Phobius | 181 | 201 | 21 | - | – | |
| Phobius | 202 | 206 | 5 | - | – | |
| Phobius | 207 | 226 | 20 | - | – | |
| Phobius | 227 | 235 | 9 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of peroxisomal membrane | The component of the peroxisomal membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Peroxisome fission | The division of a mature peroxisome within a cell to form two or more separate peroxisome compartments. |
Expression pattern of LotjaGi1g1v0468800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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