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TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

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  • IPR009027
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We have found 23 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.501s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. hypothetical ribonuclease HI, partial [Vibrio sp]. MED222] gi|497533033|ref|WP_009847231.1| chr0 149287668 149288496 -
n.a. hypothetical ribonuclease HI, partial [Vibrio sp]. MED222] gi|497533033|ref|WP_009847231.1| chr0 157782122 157782993 +
n.a. ribonuclease H [Bacteroidetes oral taxon 274] gi|496508398|ref|WP_009216681.1| chr0 192279658 192280752 -
n.a. hypothetical ribonuclease HI, partial [Vibrio sp]. MED222] gi|497533033|ref|WP_009847231.1| chr1 17202280 17203621 +
n.a. hypothetical ribonuclease HI, partial [Vibrio sp]. MED222] gi|497533033|ref|WP_009847231.1| chr1 55102211 55107760 +
n.a. ribonuclease H [Bacteroidetes oral taxon 274] gi|496508398|ref|WP_009216681.1| chr2 35716234 35721919 +
n.a. Chain A, N-Terminal Domain Of Saccharomyces Cerevisiae Rnase Hi Reveals A Fold With A Resemblance To The N-Terminal Domain Of Ribosomal Protein L9] gi|159162900|pdb|1QHK|A chr2 37804366 37806315 +
n.a. ribonuclease H-like protein [Bacillus halodurans C]-125] gi|15613426|ref|NP_241729.1| chr3 25932990 25933806 +
n.a. PREDICTED: 50S ribosomal protein L9-like [Cicer arietinum] gi|502118242|ref|XP_004496170.1| chr3 36132370 36134179 -
n.a. PREDICTED: 50S ribosomal protein L9-like [Glycine max] gi|356571485|ref|XP_003553907.1| chr3 36223582 36227766 -
n.a. Os02g0822600 [Oryza sativa Japonica Group] gi|297600141|ref|NP_001048561.2| chr3 37924436 37926462 +
n.a. Ribosomal protein L9 isoform 1 [Theobroma cacao] gi|508786424|gb|EOY33680.1| chr3 37924436 37927390 +
n.a. Chain A, N-Terminal Domain Of Saccharomyces Cerevisiae Rnase Hi Reveals A Fold With A Resemblance To The N-Terminal Domain Of Ribosomal Protein L9] gi|159162900|pdb|1QHK|A chr5 16543096 16544473 -
n.a. Ribonuclease H; TAIR: AT5G47430.1 DWNN domain, a CCHC-type zinc finger; Swiss-Prot: sp|Q9KEI9|RNH1_BACHD Ribonuclease H; TrEMBL-Plants: tr|A5BTX8|A5BTX8_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0094300_LC LjG1.1_chr1 14078227 14078718 +
n.a. Ribonuclease H; TAIR: AT2G42900.1 Plant basic secretory protein (BSP) family protein; Swiss-Prot: sp|Q9KEI9|RNH1_BACHD Ribonuclease H; TrEMBL-Plants: tr|A5BTX8|A5BTX8_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0296900_LC LjG1.1_chr1 71878857 71879681 -
n.a. Transactivator/viroplasmin protein; TAIR: AT5G15540.1 PHD finger family protein; Swiss-Prot: sp|Q9UST8|RNH1_SCHPO Ribonuclease H; TrEMBL-Plants: tr|A5BTX8|A5BTX8_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0687300 LjG1.1_chr1 125444106 125445401 -
n.a. Transactivator/viroplasmin protein; TAIR: AT5G57450.1 homolog of X-ray repair cross complementing 3 (XRCC3); Swiss-Prot: sp|Q9KEI9|RNH1_BACHD Ribonuclease H; TrEMBL-Plants: tr|A5AV09|A5AV09_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0260600_LC LjG1.1_chr3 47582435 47593161 +
n.a. 50S ribosomal protein L9; TAIR: AT5G53070.1 Ribosomal protein L9/RNase H1; Swiss-Prot: sp|Q01QR6|RL9_SOLUE 50S ribosomal protein L9; TrEMBL-Plants: tr|I3S3Y3|I3S3Y3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0466900 LjG1.1_chr3 88228491 88237210 -
n.a. 50S ribosomal protein L9; TAIR: AT5G53070.1 Ribosomal protein L9/RNase H1; Swiss-Prot: sp|Q01QR6|RL9_SOLUE 50S ribosomal protein L9; TrEMBL-Plants: tr|I3S3Y3|I3S3Y3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0466900 LjG1.1_chr3 88229621 88240263 -
n.a. 50S ribosomal protein L9; TAIR: AT5G53070.1 Ribosomal protein L9/RNase H1; Swiss-Prot: sp|Q01QR6|RL9_SOLUE 50S ribosomal protein L9; TrEMBL-Plants: tr|I3S3Y3|I3S3Y3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0466900 LjG1.1_chr3 88230072 88233381 -
n.a. 50S ribosomal protein L9; TAIR: AT3G44890.1 ribosomal protein L9; Swiss-Prot: sp|P11894|RK9_PEA 50S ribosomal protein L9, chloroplastic; TrEMBL-Plants: tr|C6T1L0|C6T1L0_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0484300 LjG1.1_chr3 90152096 90155380 +
n.a. Transactivator/viroplasmin protein; TAIR: AT5G51080.3 RNase H family protein; Swiss-Prot: sp|Q9KEI9|RNH1_BACHD Ribonuclease H; TrEMBL-Plants: tr|A0A1B5Z8F4|A0A1B5Z8F4_TRISU Uncharacterized protein; Found in the gene: LotjaGi5g1v0204900 LjG1.1_chr5 50648625 50649868 +
n.a. Transactivator/viroplasmin protein; TAIR: AT4G30310.3 FGGY family of carbohydrate kinase; Swiss-Prot: sp|Q9KEI9|RNH1_BACHD Ribonuclease H; TrEMBL-Plants: tr|A5BTX8|A5BTX8_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0226600_LC LjG1.1_chr5 53360095 53365067 -