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SSF55658

Source: SUPERFAMILY

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 23

Transcript Name Description Predicted domains Domain count
Lj0g3v0287329.1
– Hypothetical ribonuclease HI, partial [Vibrio sp]. MED222] gi|497533033|ref|WP_009847231.1|
Domains
5
Lj0g3v0303199.1
– Hypothetical ribonuclease HI, partial [Vibrio sp]. MED222] gi|497533033|ref|WP_009847231.1|
Domains
8
Lj0g3v0364389.1
– Ribonuclease H [Bacteroidetes oral taxon 274] gi|496508398|ref|WP_009216681.1|
Domains
6
Lj1g3v1399260.1
– Hypothetical ribonuclease HI, partial [Vibrio sp]. MED222] gi|497533033|ref|WP_009847231.1|
Domains
5
Lj1g3v4604390.1
– Hypothetical ribonuclease HI, partial [Vibrio sp]. MED222] gi|497533033|ref|WP_009847231.1|
Domains
8
Lj2g3v2647200.1
– Ribonuclease H [Bacteroidetes oral taxon 274] gi|496508398|ref|WP_009216681.1|
Domains
8
Lj2g3v2902470.1
– Chain A, N-Terminal Domain Of Saccharomyces Cerevisiae Rnase Hi Reveals A Fold With A Resemblance To The N-Terminal Domain Of Ribosomal Protein L9] gi|159162900|pdb|1QHK|A
Domains
9
Lj3g3v2027350.1
– Ribonuclease H-like protein [Bacillus halodurans C]-125] gi|15613426|ref|NP_241729.1|
Domains
5
Lj3g3v2906240.1
– PREDICTED: 50S ribosomal protein L9-like [Cicer arietinum] gi|502118242|ref|XP_004496170.1|
Domains
9
Lj3g3v2908510.1
– PREDICTED: 50S ribosomal protein L9-like [Glycine max] gi|356571485|ref|XP_003553907.1|
Domains
11
Lj3g3v3032110.1
– Os02g0822600 [Oryza sativa Japonica Group] gi|297600141|ref|NP_001048561.2|
Domains
15
Lj3g3v3032110.2
– Ribosomal protein L9 isoform 1 [Theobroma cacao] gi|508786424|gb|EOY33680.1|
Domains
17
Lj5g3v1015040.1
– Chain A, N-Terminal Domain Of Saccharomyces Cerevisiae Rnase Hi Reveals A Fold With A Resemblance To The N-Terminal Domain Of Ribosomal Protein L9] gi|159162900|pdb|1QHK|A
Domains
10
LotjaGi1g1v0094300_LC.2
– Ribonuclease H; TAIR: AT5G47430.1 DWNN domain, a CCHC-type zinc finger; Swiss-Prot: sp|Q9KEI9|RNH1_BACHD Ribonuclease H; TrEMBL-Plants: tr|A5BTX8|A5BTX8_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0094300_LC
Domains
6
LotjaGi1g1v0296900_LC.2
– Ribonuclease H; TAIR: AT2G42900.1 Plant basic secretory protein (BSP) family protein; Swiss-Prot: sp|Q9KEI9|RNH1_BACHD Ribonuclease H; TrEMBL-Plants: tr|A5BTX8|A5BTX8_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0296900_LC
Domains
10
LotjaGi1g1v0687300.1
– Transactivator/viroplasmin protein; TAIR: AT5G15540.1 PHD finger family protein; Swiss-Prot: sp|Q9UST8|RNH1_SCHPO Ribonuclease H; TrEMBL-Plants: tr|A5BTX8|A5BTX8_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0687300
Domains
8
LotjaGi3g1v0260600_LC.1
– Transactivator/viroplasmin protein; TAIR: AT5G57450.1 homolog of X-ray repair cross complementing 3 (XRCC3); Swiss-Prot: sp|Q9KEI9|RNH1_BACHD Ribonuclease H; TrEMBL-Plants: tr|A5AV09|A5AV09_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0260600_LC
Domains
10
LotjaGi3g1v0466900.1
– 50S ribosomal protein L9; TAIR: AT5G53070.1 Ribosomal protein L9/RNase H1; Swiss-Prot: sp|Q01QR6|RL9_SOLUE 50S ribosomal protein L9; TrEMBL-Plants: tr|I3S3Y3|I3S3Y3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0466900
Domains
10
LotjaGi3g1v0466900.2
– 50S ribosomal protein L9; TAIR: AT5G53070.1 Ribosomal protein L9/RNase H1; Swiss-Prot: sp|Q01QR6|RL9_SOLUE 50S ribosomal protein L9; TrEMBL-Plants: tr|I3S3Y3|I3S3Y3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0466900
Domains
10
LotjaGi3g1v0466900.3
– 50S ribosomal protein L9; TAIR: AT5G53070.1 Ribosomal protein L9/RNase H1; Swiss-Prot: sp|Q01QR6|RL9_SOLUE 50S ribosomal protein L9; TrEMBL-Plants: tr|I3S3Y3|I3S3Y3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0466900
Domains
10
LotjaGi3g1v0484300.1
– 50S ribosomal protein L9; TAIR: AT3G44890.1 ribosomal protein L9; Swiss-Prot: sp|P11894|RK9_PEA 50S ribosomal protein L9, chloroplastic; TrEMBL-Plants: tr|C6T1L0|C6T1L0_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0484300
Domains
19
LotjaGi5g1v0204900.1
– Transactivator/viroplasmin protein; TAIR: AT5G51080.3 RNase H family protein; Swiss-Prot: sp|Q9KEI9|RNH1_BACHD Ribonuclease H; TrEMBL-Plants: tr|A0A1B5Z8F4|A0A1B5Z8F4_TRISU Uncharacterized protein; Found in the gene: LotjaGi5g1v0204900
Domains
7
LotjaGi5g1v0226600_LC.1
– Transactivator/viroplasmin protein; TAIR: AT4G30310.3 FGGY family of carbohydrate kinase; Swiss-Prot: sp|Q9KEI9|RNH1_BACHD Ribonuclease H; TrEMBL-Plants: tr|A5BTX8|A5BTX8_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0226600_LC
Domains
10

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
TRANSMEMBRANE Phobius 1 4.35