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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0466900 |
| Transcript ID | LotjaGi3g1v0466900.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 50S ribosomal protein L9; TAIR: AT5G53070.1 Ribosomal protein L9/RNase H1; Swiss-Prot: sp|Q01QR6|RL9_SOLUE 50S ribosomal protein L9; TrEMBL-Plants: tr|I3S3Y3|I3S3Y3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0466900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:88229621..88240263) extracted from Lotus japonicus Gifu genome v1.2.
AAATAAGCTCAAATAAACTTTTTTCCAAATGAGGTCAAAATTCATGCAAGAGCACAACACAAAATCCCCTATTGGACTAG GAGACCAGGAAGCGTAACGCAGTAAAACTGTAAAAAGAGAAAAACCTGACACTATAAAACAAAGACTTGTCCTCCCTTTC ACTTCACTTCATTCCATTTGTTGGAGTTTCAACCCGTTGTTGCCTTCTCTCCCTCAAACTCAAATCAAATCTCCATCTTC TTCTTCCTCAATCCTCATCAACCAACAACAAGGTACGAGCAAACATGCAAGCAATCTGAACCTTCCTTGCCCTTTTATAC GATCTCACTCTGTCTTTGTATAGATACATAAAAATGAAATTTTGCCCTATTTTTTCAACAATTATGTGCAATTTACTCCA TTTAACAACTGGGTCTTTCTGATTCTTATCTATTGAGCAAAAAGTTTTGATTTTTTTCAATAAACTCTTCAAACTTTGCT TTGGATTCATCTAGAGATCTTGTGGGTGGGTGTGTACCCAAATCTTGTTAATTCAAAAATCCCAAATGTTATTTTTCTTG CTTTGGATTGTCACATTGATTAATTAACTGTGTCAATTGAAACCAAACATGTGTGTTTGGCATTATTGACCTTGTGCGAC TTGGATTAGATGCGATTTTGTGAATGTTTCCGCCTACCTTTTTGTCTCTTTATGTTTTGTTGTTGTTTTGTTTGTTAATT TGCTTTGATAGCATGTTTAGGATGTTTGTATTAGCTTCTGTTTTCTTTGTGACATCAATAAGCTACTAAGATAAGTTTCA CCCTAGAATTGTTTTTGGCAGTAGAATCAATTCTAGAGGGATTTCCAAACATGCATGTATAAGTGATTAGCATCAATTCT GACATAAAGAAGCTACTTAGCTTCTTCATGTAATTTATTATGACTTTAGAATCAATTCTAGAACGATTTCCAAACATGCA TTGATACATGATTAGAATCAATTCTGGCATTTAGAAGATACTTAGCTTCTCGCCTTCTCCCCATAATTGATTTTGACTTT AGAATCAAAAGCTAGATGAATTTCCAAACATGCATTGATAAGTGATTTGAATCAATTCTGGCACTAAGAACTAAGGAGAG ACTCACATAAGTTTCTCCCTAAAATTGATTTTGGCTTTAGAATCAATTCTAGAAAGATTTCCGAACATGCACTGATTAGT GATTAGAATCAGTGAAGATTTTAAATTTTTCTGCAGGTAAAAGGAGGGAAATCAATCATGGGGAGCAACAAGGCACCGAG TTGGTCTGATCAATGGGGAGCGGGTGCTTTTGGGAACGAGGAGCATGTGGAAGATGACAAGGCGAAGAAGAGCATTAGTG GCGGAGGCAGCAGCAGCAAGAAGATGGCAGCCGGGATGGAAAAGGCCAAGGCAGCAGCAGCTGTGGGTGCTGACAAAGCT AAGACAGCTGCTGTGGTGGGTGCTCAGAAGGTGAAGAGTGGCACCTCTGCTGGGATCAAATGGATGAAGACTCAGTACCA GAAAAGGACCTCTAAGTGAAGAACTTATTCTCTGATCCTTGTATTTGTTTTGGTACATACACATTGATTCAGTAAAGTTT GTTTCATAGAGATAAAGATTGATTATGTTTTGGCTTCCAGTTTTGAGCATTACAAACAATCCAGAATAGCTTATACTTCT TGTTATTTCTATTATTCATTTGTTTATAGAGAAATGTGGAATGTTATGACTTTACCCTCTCCATCTATAAGTGCATGTTT GGATTGAAGTTAGGAAGACATTTAAAACAGCTTTGCAGCGAAATGTGTTTCCAAATTGCTTCACAGTTTTACTTGCACCA GTTGTTCCCTATGAATTGATAGGATAAAGATGTGCGGCTAAAGTGTTGAGACTTGAGATAGAATATGATTGAAAAATTAC TTGTTAATACTGTGTTAAAATATATCTACATGTATAACAAATTTCAAAATTATTAGAAGTTATAATTCTTGCTTTATTAA TAATTGTCTAAAGAAGTACTAGTATGATTTTGCATTTTATGGTCAAAAGTCACTTAATCTAGAAGAGGCGAATGCCGGTC ATTATAGCTTATATTGACTTCAATCGATTTATGAAGTATTAATTGAGGCGAATGCCGGTCATTATAGCTTATATTAGATT TTTGTACAATTTGGACAAAGTCAATTTTTATCAGTTTAGACTTTAGATATCGCTATTTATTTAATTTGACCAAATTAAAT AAAAATCCAATTGCTGTATTTCTAAGATTTTAATATGAAGATGTTTAAAAAAAAAAGATTTTAATATGAAGATCTTTAAT TTATTTATATAAACATAATATGCACCGTCATTTTTTTTATATATTTTGTTTTGAAAGATGAAAAGCCAACTTGGTTCCTA AACTCTAAGCTTATTTTGAATATGTAATTATCGATTTTAAAAATTATATGTTGGTAGGCTGGTCTAGTGCTAGGCAAGCT AGATTTTCTGTAAAGGTAATGTCACAAGATCGAACCTTGGATTGGGAAAGATAGTTACAGTTTCCCAAACAGGTTTGCAC ATGCTAAACATAACAGGTGGAAACCCAAATTGATGGAGGGTATTCTTCAAGAAGCCCCAATCCATTCGATCATATGATCA TGCACCTTCTCAAGATCCCGCTTAAAGGTGATGTCCTTATCTTCCCTCTTCATCTTCTTTTTTTGTGAGCTCAGAGTATC CAGCAACAACAATGATTAATTTCCTCACCGCAGGTGCTCGTAATAAACGGTAAATGATTGACCATGAAATGTGATTCATT CTCATGGGGAGGATCGAAACCTTGACCTCAGGGTTAAGGGGCTAGGTGAACTAACCACCACGTGTTACCTCACGGTTAAA CCAATCGGCTGAGTACTCTACTTTCTTCTTCTTCTTATGAACAATAACATCAGCTGTGCACCTCTCCGTTATAAAACTAC TCTAAGTCTCTAAGTGTGAAGGCTTAACCAAGACCTTAATAATCACCTTATAAATAATGTTTCAAATACTAATCGGTCTT AACTTCTTAAATGAAGTTTCAAAAAAAAAAAACTTCTTAAATGTTTTTGAATATTTGACATTAGCAATTAACCCATTCAA AACCAAAGCTGGATCAGATGTACTCAATGCAAAAACTCGCCCAACATGCTCCAAACCTCGTCACTTACAATGTGCTGATA ATTTAATTAAATGAAAAGCTGAAAGTCATAAAACTCTGTAGTCTTGAAAGACTTCATTCACTATTTTCCGAAGCACAAAA AAAACAAAGACTTCATTGACCTAGTCGTTTGCCACACTTCATAAACTTTATGTACCAAAAAAAATTCAAATAAACTTTTC TAAACACACTAAATGCCACAATTTAGCCTCATTTTACTAAATCTGCATACAGATGAGCTTGAAACAATCGTCTGGTCTGA CCTAAAGGTAACCCCATCAGAGATCCCCAGATCACTGAGTCAACGGTTTGACAGCGGTTAAAAGTTTGAAAACCCCCTTG TCTAATTTTAAAAACTGAACATGAAAATTACTTTTCGAATATGAAAATAAGAAGAATGAAAATGAGAAAACATTTTAAAG AGCACATACCCTTAAACTTTAGCAATATAGTGAACACAAGGCAATTTTCAAATAAGTACCGGTACAAGAAACGATAGAAA TTGAAAGCAATCAGTTAATGAACTTTACAAGAACCAGATCAAACCAGAGAATTTACAATTAAGCTGACTTCTTCATAATG GTCATTTTTCATTAAGCTCTATTCACATGATCGTGCTATGATTTATGAATTATTTCAGATCATCATCCCAAATGTGTTCT CCCCACTGTAAGTCATATAAAGGAATCCATCTTCATCCTTATTTTCCTCATAAATTGCAGACATCATGGCCGCTGCATGA ACAAAAACCACAGCTCAGTTCACAAATCAACTACAGTTAAAACTACAATAAATAACAAAATTTTCACATATATACCACAT ACACATGAACAAAATCCACATATATTACCAGTTGGGGGCAAAATGTTCTTGACAAAAATGAAGATGGCCTTCTCAGGACT CAGCTTGATTCTCTTACGCACCACATACACAAATTGGCCAACAGTTAAATCAGCAGGAACAAGATACCTATATATATCCA AAATGGAACGATAATCAATAAAGAAAATACAAGGGATGAAAGATGAAAAATGTATCCAGTATCCACACAACACAATAGAA CATTCCGATAATTGTCAGTGTAATAAGAATTTCACGCATCCAATATTGAAGTCAAAAGAGGTAAATGAAAACATTGAGCA TGTCGAAATGCCTATATCTATCCTAGACATCCATCCACCAGCCAGGTTACTTAGTGTACTAAAAATATGTTTGGCTTACG GTCTTACACCCCAGACATACAGTCATACGTCCCAAAGGACATTTTCACATTGGCTGAAACTTATATATACACTAAGTTTC CAAGGTCATTTTTTTCTTTTGATTTTAGAAGGTGAGAAGACAGTGAGTTATGAGTTATACCTCCTACGTTTTGCAAGAAT GTACCACAAAAGCCAAATGCCATTGGAGACTTAACTACTTACTAAAATAACACATGGCTCCAACCCAAACAAGTACATAA TGCAGATGCACACAGATTTTGGGACATGAAGTCTCAACTTTCTGATACATTCAATTATTAACACCCAAGTCTTAACAAAA ACCTGTTCTCACTTTATGATCAAACTAGACTGTTTCTACAGTTTCCATTCTATTTACATTGTTAAAAACCAAGAGCATTA AGGTTTCGTCTACATGCATAAATAGAAAATACACACGACAGGTCTTAGCCAGCGACAAACCATGTCTCTACATGGATCAC ACAACACTATAATTTCTCATCATGTATTAAGTTCAAAGTTGAACCATAAGCAACCATAAGTGTCTACATTTTTCAAATTT CAAAGTAAAGCTACCATACATTCAAAACTTCAACCAGACATAGCAGGACAAGTTTCATGCAGGGAAATATTCACGAAACA AGTAATAATAGTTATAACGAAAATTGGATTAAATAAACTGAACCAATATTTGCAATATCACTTCCCAAAGAGTAGAAGAA ACTAACTTTTTCTTATCAATTTCAGGAACATCACTCTTCTCTGCCCTTTCAACAATAACCTACATCACAAGATCAACCAA AATAATAAGCATCCAATGATATTAAAATGGCACATGCACACAGACAGCACAGCAGAAAGCAGGTCTTACCGGAATTCTGT CAGGATACTTCTCTCTTATGCGAGCTGCTTCAGCCTGTCTCCTTTCTGGCATGTTAATGGTTGCACATATTAGAGAAGAT AAATGTTGGACCTAAATCACCCAATAGGTGAACTAAATACAAGTTTACATGCACTTAGGAAAGTATAATTAAGTGCTATA ACATAGGTCATTGTTTATACTAAACTCTAAACTAAATATAAAGAGCAAAAATATGTAGTTAAGACAAGACAATGGCATTT GATAGAGTAAAAATTTCTGGTAAAAATTCAATTTTCATGGAAGAAGTGATAATGGTGCTTAAAAATACAAACTTTACATC ATAGTTAAACACCCAAATAAAAAAAAAAATAGAAACCAAACCCTAGACAGTTAGATTACTACCCGAGAATCCCAAAAGCA TCAAGTTTGATCAACTCATAAAACTGCACTATACAGTAACAATTGAACAAAAAATTGGTAAATTAAGAGAGGAGCGAACC AAGTGGGTGTTCCATCTTGAATGAGCTCTTAGCCATGGCGATGATTCTGCAGCACCAATTATGGAATTAGGGTTTGGTAC GAGGGTAGCGATGAATTGAGGAGCGAAAACGATTGACGAATAAAAAGGAAAAAGGATCGCAATTAGAATTGAAGAGTAGA TGTTGCTTACCAGAGAGAGAGAGAGAGGAGAGCGAAAGAGAGAAGAAGAAGATGTGTTGCTTGCTTGATTGATCAGATAA GAAGATGAAGAAGAAACCTCCGTCAAAGAAAAAGGAAGTTTATTTATTTTTTTTATTTTTTTTTTATTTTTTTTTTTATT TTTATTTTTATTTTTATATTTTTATATGAAGGCGTGCGTGTCAAGAACCCCCATCCATTGACACGTGCCGGCCAAGTTTT TTTCTTTATGTATATGTGATGTGAATGTGAAAGTGAAAGTGAAAGACAAGTCCAACCCGACCCAACAAAAAGCCCTTGCT CCATCAGCCCACCACCGTTGTTGCCTTCTCTCCCTCAAACTCAAATCAAATCTCCATCTTCTTCTTCCTCAATCCTCATC AACCAACAACAAGGTACGAGCAAACATGCAAGCAATCTGAACCTTCATTGCCCTTTTTCACGATCTCTCTCTGTCTCTGT ATATGCTTAGATTTTTTTAATTTATTTTTGTGGGAGAGCTCTAAGTCTCATGAACACCTAGCATACTACTATATTCATTC TTATTGTCTCTGTTCAGTTACCCCACAGGTACACAAGTTAGGGATTGAAGACTCATTACAATAATACATAATATTCTTTT ATATTCCAATTCTATTAGAGATCTACAGAGTATAAGTAATAGGAGGGAATAAATCGTTAAGGGTCTTTGGTTTTGGTCCT TTTGGAGTAAAATATGGGGAGGAGAGCCCAAATCTCTCAAACACTTGGAGGAATCTGCATATACATATTTTCGTATCTTT TTTCTTGTATCTCTTATGTATCTCATTTCTGTCTATAAACTTTCCTTTTCTATCCTACTTTTTGATCCATTTCCATCTAT TCGAAGAAATGGAATTTGTTGGTTTGATACTGATAATTGTTTGTTTTCAATCTTGACAGAGAAAAGTTGTGACTGAATCT GAATGGGTTATCTTCAATATGGAAGACTTGGTGTTAGGCAGATCATCAGATTTAGAGATTCCAGTTCTAATAGTGCTGTC GTAAACCCACTTCTGTATGCGTCTCAAGGACTTCGATACAACAGGAAGCTCCAAGTCATCCTTACAACTGTAATTATCTA TCTTGACTCCTAATGTTTAATTACTGGGATAAAATTTTATTCAAATATCTGATATTTTCAATTTCTAATTTATAGGACAT AGATAAGCTTGGAAAGGCAGGCGATACGGTCAAGGTTGCTCCTGGATATTTTCGCAACCACCTAATGCCCAAGCTCCTCG CTGTCCCTAACATTGATAAGTTTGCTTATCTCCTCACTGAGCAGCGCAAGGTTTTTCATCCTTTCATTAGTCTCATTTTA CACATCTATGCTATTGGTTGTTCAATGCCATTGATCTCTGTTTCTTATTCATCTATGCTATCTACCACTTTCAGTTCTCT GCATTTTTCTATCTTCTAGAATAACTTTTTTAAGTTCTTGATATGACAATAGTGCATCCTTTTCCTTTACTTTTTGTGTT TATCTGAATGTGGGCGCAGCCCATATTGTCAACATTGCTTGGCACATAAACATTTGCATACTCACATAGCCAGTCTTCAT AACTTACTCTGTCTTCTACAATTGTTGAGACTTCAGATTTATCAACCTACTGAAGAAGAAAAACAAGAAGACGTTACTGT AGTTAAAGAGTCAAAGGAAGATCTGATGAAAGAGTATGAAGCAGCCGCACTTCGTCTTGATAAGGCTAAGCTGGTTTGTA GCTTACTCTTCAAAGCTTTTCATTTCTGTTTGGAACTATTTCTCCTATCCTTTTTGGGGAAATTATTTGCCTTCTCAAAT AGTTGAACTGGTGACGATTAATCATATATTTTAAATATTAATGATGAGTTACGATCCACTGACAATAGGTTTAAGTGTTG AACAGTTATATCATCGAGTAACTTTTTGTAGAATTCAGAGTTAGGTAAACCGGCAATTGAACCATGTTAAATTCTCTTGA TGATCATGTATTCAAAGTTTTAGATAATTTAGGTTTTCATTGATATGTAATCTAATAGAATTTTGTTTATATATTTTAAG TAGCATATTATATGTTAAAATATAGTGGTGTGGTGGAATATAAAGTAGTTTTAGATTTGTATGAAATTTTATAAAGTTGA TCTACTTCCTGAGAACTTTCAATTCAACAATAAAAATTATCAGGTGGTGTAAGCATACCGAGACTTACATTTGATGGTAT TGGATCTTGACTCTTATATAATATGTTAAGTAGTAAACTAATATCTAAGTTAGATAAAAATTTAACTTGCCATTTTGGTT TGGTTTTCAAAACTATGACTCTGATATACTCCCCAAGATTGTTTCTGTTAGAGTGGTATAATAGAAACATGAGTAGTGCT AGCAACACTCACTCTAACACTCTATTTTCAACAATCTTTGATTGGTTGAAATTCATATGGATCCCACTAAATTGGCAGTG GGGCCCCATATTTTTATTGGATCCCACATGAATTTTAACGAATTAATGAGTGTTAAAGTCAGTGTTGCTAGCATTTTTCT AGAAACATTTACTTGATATTTTGATAGTCTTTCATGTCAAAACTCACCCATTAATATTTGTTATTTTAATATGAATTGAA TGTGATCATCTAATAGGTCTTGCGGAGGTTAATTGATGTTAAAAAAGCTAAGGCACGTGCATCAAAAGATGAACCCTTGG AAATACGATTACCTGTGACAAAAGAAGTACTTGTGGCTGAGGTAATATTTTTTCTTCTTAATTTTAATGTGTTCTTCGTT GTAACTAACAAACAAATTTAGAAATAAGTATATAGTGTGTTAAAAAGAAATACTTGCAAGTTGCAACTAGTATTTGATGC TTCAGGAGAAACTTTCTTGGCCTGTTGGCCATGTGATTTGCTTGTAGATTTAGATTTCAGAGAAACAATCATCCAATCTT GTGCAAATACTACTTAAGGAAATGAACTTCCCAAATTTAGTGATAGTATGTAATTTCATTTGGAAAGAAATACAAGTATG GAAAAGCAATATGAAACCACATTATAAATCTGTCAATTCTCAGAACTGAGATTCTAAACAACACAGTAGCTGAATGCGCT GTGAATAACTTTTTCTACGCCCTATTGCGAATAACTTTTTCTGCGCTCTATCCCCTCTTCTTCTCGCTCTTTTTCATTTC CTATAACTAATTCTTCCCTCTATGTCTTCATCATGTGTCCCCTCGTACTGTGCCAAATTTTAGGCTTATTAACTTGGGTT ACCAATTAGCTGAATTACCTCATATTCGAAGGAAATTAAGTGTGGGGTTGCTGACGGAGGAATGAGGTATGCGAGTCCAA ATTCAGTGATCCATCAAGCTAGGTCAACTTTTCCTTTTCATATATAAACCCCAACACAAGCTGGTTTCAGCGAAGCAGCT GTACCAGCAGCTCGATTTCACCTTTCCCAACCCAATTTCTTCAATGGAGGTTCCTGCCAAGTGAAAATGTGTAGTGGAAG TTTGTGTCATTTGCTAATGTGCTTTTCTTGCTTTTATTCTTTGAAACTTGAAATACATAATGATTCATATTAGAATAGGT TGAGAACTTTCATAATATTATTTTATACATTACAATATTTAAGAGTCCTTAGATTAATTCTTTAGAATGTTTTCCATATT TCATGATTTGTTTTCTTATTTAATTAGTGTTTGGAGTTTAATGTTCCTATCAATAGGGGTTAAGGTATGTCTTCTAATTA CATCAAATCAATTAATTTCAGATTTTCCAGTCACTATGTTTTACTTGTTTTTCTTTTCCTTCCCATAAACATGCCATTGT GCTGTTTTGAATACAATGACTTGGCCTATAAAAAAAATGTAGGATGTAAGCTATTTTCATAAAATTAACCAAACACTTGT TGCTTATAGGTAGGTTATAAGCTATTTTCAAGGTTTGGTTAAGCCTCACTTAAGTCCTTATGTAATAAGATAAACTCATA AACTTTTTCTAATGCATCACAATAATATCAGATATGTCAAAGGTCAATTTCCTTTTCCCGCTCATTCTTTTTCTGGTATT GACTTTGAAATGTGGTGCTATTTTCAGGTGGCAAGACAACTCTGTGTAAACATTGCACCTGAAAACCTGCATCTTCCATC ACCATTATCTACCGTGGGAGAATATGAGGTTCCACTGCGTTTACCCAGGTCCATCCCTTTGCCTGAGGGCAAGGTTAACT GGAGTTTGCAAGTTAAAGTCCGGAGTAAATAATCACAAAGCCTTGTTGAAACTAAAGTTTATCAGGATGAAGGTTTTGGT TCATTTATACTGATAAATTGAACCCAGGGGATTCTAGAATTGCAATCTTCCTAGTCAAATTTTTCATCTGACTTACAATT GATTTTGTTTATGTATTAGTCTTCTGGTCTTCAATAAGTACCCTTTTCATTTATTTACCTTCATTTTGAGACTCATGAAC CAACTTGCAATTTACTCCCTTTGAAGATGTAAAATGCATTTTACAATTAGACTTCTTTTTTCTATGATGAATATCACAAA ACAGGTCGCACATGATAAGGTCCTTGAAACGAAGAGCTCGTTTCGATACCTGTTTTCATACTTTCTAACGGGTATCCAAA TTGGCTCTAAAGTAGTATGATGTTTTTTTAGCACTAAAGTAGTATGATGTTAGTTCCATGCTATTGTTTTTTACAAAAAG TTT
CDS sequence (LotjaGi3g1v0466900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTATCTTCAATATGGAAGACTTGGTGTTAGGCAGATCATCAGATTTAGAGATTCCAGTTCTAATAGTGCTGTCGT AAACCCACTTCTGTATGCGTCTCAAGGACTTCGATACAACAGGAAGCTCCAAGTCATCCTTACAACTGACATAGATAAGC TTGGAAAGGCAGGCGATACGGTCAAGGTTGCTCCTGGATATTTTCGCAACCACCTAATGCCCAAGCTCCTCGCTGTCCCT AACATTGATAAGTTTGCTTATCTCCTCACTGAGCAGCGCAAGATTTATCAACCTACTGAAGAAGAAAAACAAGAAGACGT TACTGTAGTTAAAGAGTCAAAGGAAGATCTGATGAAAGAGTATGAAGCAGCCGCACTTCGTCTTGATAAGGCTAAGCTGG TCTTGCGGAGGTTAATTGATGTTAAAAAAGCTAAGGCACGTGCATCAAAAGATGAACCCTTGGAAATACGATTACCTGTG ACAAAAGAAGTACTTGTGGCTGAGGTGGCAAGACAACTCTGTGTAAACATTGCACCTGAAAACCTGCATCTTCCATCACC ATTATCTACCGTGGGAGAATATGAGGTTCCACTGCGTTTACCCAGGTCCATCCCTTTGCCTGAGGGCAAGGTTAACTGGA GTTTGCAAGTTAAAGTCCGGAGTAAATAA
Protein sequence (LotjaGi3g1v0466900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGYLQYGRLGVRQIIRFRDSSSNSAVVNPLLYASQGLRYNRKLQVILTTDIDKLGKAGDTVKVAPGYFRNHLMPKLLAVP NIDKFAYLLTEQRKIYQPTEEEKQEDVTVVKESKEDLMKEYEAAALRLDKAKLVLRRLIDVKKAKARASKDEPLEIRLPV TKEVLVAEVARQLCVNIAPENLHLPSPLSTVGEYEVPLRLPRSIPLPEGKVNWSLQVKVRSK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 221 | 221 | 2.0E-103 | – | |
| PANTHER | 1 | 221 | 221 | 2.0E-103 | ||
| SUPERFAMILY | 43 | 97 | 55 | 8.55E-12 | ||
| Gene3D | 43 | 91 | 49 | 5.6E-15 | ||
| Pfam | 44 | 80 | 37 | 9.1E-15 | ||
| Coils | 111 | 134 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Structural constituent of ribosome | The action of a molecule that contributes to the structural integrity of the ribosome. | ||
| Cellular component | Ribosome | An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins. | ||
| Biological process | Translation | The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome. |
Expression pattern of LotjaGi3g1v0466900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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