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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR009330
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.117s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0187099.1
n.a. ABC1 family protein [Theobroma cacao] gi|508781897|gb|EOY29153.1| chr0 91263299 91279079 -
2 domain predictions
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LotjaGi1g1v0198800.1
n.a. ABC1 protein kinase; TAIR: AT5G24810.1 ABC1 family protein; Swiss-Prot: sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770; TrEMBL-Plants: tr|A0A0S3RN26|A0A0S3RN26_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0198800 LjG1.1_chr1 41844277 41873702 +
2 domain predictions
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LotjaGi1g1v0198800.2
n.a. ABC1 protein kinase; TAIR: AT5G24810.1 ABC1 family protein; Swiss-Prot: sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770; TrEMBL-Plants: tr|A0A0S3RN26|A0A0S3RN26_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0198800 LjG1.1_chr1 41847507 41873193 +
2 domain predictions
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LotjaGi1g1v0198800.3
n.a. ABC1 protein kinase; TAIR: AT5G24810.1 ABC1 family protein; Swiss-Prot: sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770; TrEMBL-Plants: tr|A0A0S3RN26|A0A0S3RN26_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0198800 LjG1.1_chr1 41847762 41873193 +
2 domain predictions
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LotjaGi1g1v0198800.4
n.a. ABC1 protein kinase; TAIR: AT5G24810.1 ABC1 family protein; Swiss-Prot: sp|Q09621|LACT2_CAEEL Beta-lactamase domain-containing protein 2; TrEMBL-Plants: tr|A0A0S3RN26|A0A0S3RN26_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0198800 LjG1.1_chr1 41847809 41873193 +
2 domain predictions
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LotjaGi1g1v0198800.5
n.a. ABC1 protein kinase; TAIR: AT5G24810.1 ABC1 family protein; Swiss-Prot: sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770; TrEMBL-Plants: tr|A0A0S3RN26|A0A0S3RN26_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0198800 LjG1.1_chr1 41847809 41873193 +
2 domain predictions
 –