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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR010203
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.510s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0271599.1
n.a. PREDICTED: regulator of ribonuclease-like protein 3-like [Cicer arietinum] gi|502077483|ref|XP_004485665.1| chr0 140715613 140716722 +
2 domain predictions
2 GO terms
Lj6g3v2145470.1
n.a. PREDICTED: regulator of ribonuclease-like protein 3-like [Cicer arietinum] gi|502077483|ref|XP_004485665.1| chr6 24897893 24902739 -
2 domain predictions
2 GO terms
LotjaGi1g1v0485500.1
n.a. 4-hydroxy-4-methyl-2-oxoglutarate aldolase; TAIR: AT5G16450.1 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase; Swiss-Prot: sp|Q9FFE0|RRAA2_ARATH Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2; TrEMBL-Plants: tr|I3SFU5|I3SFU5_LOTJA 4-hydroxy-4-methyl-2-oxoglutarate aldolase; Found in the gene: LotjaGi1g1v0485500 LjG1.1_chr1 99869915 99874080 -
2 domain predictions
2 GO terms
LotjaGi1g1v0485500.2
n.a. 4-hydroxy-4-methyl-2-oxoglutarate aldolase; TAIR: AT5G16450.1 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase; Swiss-Prot: sp|Q9FFE0|RRAA2_ARATH Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2; TrEMBL-Plants: tr|I3SFU5|I3SFU5_LOTJA 4-hydroxy-4-methyl-2-oxoglutarate aldolase; Found in the gene: LotjaGi1g1v0485500 LjG1.1_chr1 99871338 99871898 -
2 domain predictions
2 GO terms
LotjaGi1g1v0485500.3
n.a. 4-hydroxy-4-methyl-2-oxoglutarate aldolase; TAIR: AT5G16450.1 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase; Swiss-Prot: sp|Q9FFE0|RRAA2_ARATH Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2; TrEMBL-Plants: tr|I3SFU5|I3SFU5_LOTJA 4-hydroxy-4-methyl-2-oxoglutarate aldolase; Found in the gene: LotjaGi1g1v0485500 LjG1.1_chr1 99871398 99871898 -
2 domain predictions
2 GO terms
LotjaGi6g1v0344600.1
n.a. 4-hydroxy-4-methyl-2-oxoglutarate aldolase; TAIR: AT5G56260.1 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase; Swiss-Prot: sp|Q9FH13|RRAA3_ARATH Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3; TrEMBL-Plants: tr|I3T2K9|I3T2K9_LOTJA 4-hydroxy-4-methyl-2-oxoglutarate aldolase; Found in the gene: LotjaGi6g1v0344600 LjG1.1_chr6 65713796 65716202 -
2 domain predictions
2 GO terms
LotjaGi6g1v0344700.1
n.a. 4-hydroxy-4-methyl-2-oxoglutarate aldolase; TAIR: AT5G56260.1 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase; Swiss-Prot: sp|Q9FH13|RRAA3_ARATH Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3; TrEMBL-Plants: tr|I3T2K9|I3T2K9_LOTJA 4-hydroxy-4-methyl-2-oxoglutarate aldolase; Found in the gene: LotjaGi6g1v0344700 LjG1.1_chr6 65727280 65732120 +
2 domain predictions
2 GO terms