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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR010977
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.698s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0211149.1
n.a. PREDICTED: tyrosine/DOPA decarboxylase 2-like [Glycine max] gi|356522542|ref|XP_003529905.1| chr0 106312143 106313663 -
2 domain predictions
2 GO terms
Lj1g3v4528440.1
n.a. PREDICTED: tyrosine decarboxylase 1-like [Cicer arietinum] gi|502110253|ref|XP_004493836.1| chr1 53348655 53354755 -
2 domain predictions
2 GO terms
Lj6g3v1679480.1
n.a. PREDICTED: tyrosine/DOPA decarboxylase 2-like [Glycine max] gi|356558045|ref|XP_003547319.1| chr6 18698259 18700169 -
2 domain predictions
2 GO terms
LotjaGi1g1v0703100.1
n.a. Tyrosine decarboxylase family protein; TAIR: AT2G20340.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q8RY79|TYDC1_ARATH Tyrosine decarboxylase 1; TrEMBL-Plants: tr|G7KYF4|G7KYF4_MEDTR Tyrosine/DOPA decarboxylase; Found in the gene: LotjaGi1g1v0703100 LjG1.1_chr1 127134756 127140999 +
2 domain predictions
2 GO terms
LotjaGi3g1v0391700.1
n.a. Tyrosine decarboxylase; TAIR: AT2G20340.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|P54769|TYDC2_PAPSO Tyrosine/DOPA decarboxylase 2; TrEMBL-Plants: tr|A0A0B2R021|A0A0B2R021_GLYSO Tyrosine/DOPA decarboxylase 2; Found in the gene: LotjaGi3g1v0391700 LjG1.1_chr3 79013868 79016176 -
2 domain predictions
2 GO terms
LotjaGi6g1v0274400.1
n.a. Tyrosine decarboxylase; TAIR: AT2G20340.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|P54769|TYDC2_PAPSO Tyrosine/DOPA decarboxylase 2; TrEMBL-Plants: tr|V7AQJ2|V7AQJ2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0274400 LjG1.1_chr6 59129157 59131248 -
2 domain predictions
2 GO terms
LotjaGi6g1v0274400.2
n.a. Tyrosine decarboxylase; TAIR: AT2G20340.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|P54769|TYDC2_PAPSO Tyrosine/DOPA decarboxylase 2; TrEMBL-Plants: tr|V7AQJ2|V7AQJ2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0274400 LjG1.1_chr6 59129541 59131097 -
2 domain predictions
2 GO terms