Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR011017
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 12 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.014s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v0318410.1
n.a. PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine max] gi|356542711|ref|XP_003539809.1| chr1 3784246 3785719 +
2 domain predictions
 –
Lj1g3v0318410.2
n.a. PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine max] gi|356542711|ref|XP_003539809.1| chr1 3784246 3785719 +
2 domain predictions
 –
Lj2g3v1984090.1
n.a. PREDICTED: 60S ribosomal protein L24-like [Solanum lycopersicum] gi|460408062|ref|XP_004249467.1| chr2 28941255 28942458 +
2 domain predictions
 –
Lj4g3v2883310.1
n.a. PREDICTED: 60S ribosomal protein L24-like [Solanum lycopersicum] gi|460408062|ref|XP_004249467.1| chr4 38650215 38652430 +
2 domain predictions
 –
LotjaGi1g1v0175600.1
n.a. 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0175600 LjG1.1_chr1 33623691 33626704 -
2 domain predictions
 –
LotjaGi1g1v0175600.2
n.a. 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0175600 LjG1.1_chr1 33623691 33632047 -
2 domain predictions
 –
LotjaGi1g1v0175600.3
n.a. 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0175600 LjG1.1_chr1 33625179 33626091 -
2 domain predictions
 –
LotjaGi1g1v0175800.1
n.a. 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0175800 LjG1.1_chr1 33721420 33724454 +
2 domain predictions
 –
LotjaGi1g1v0175800.2
n.a. 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0175800 LjG1.1_chr1 33722033 33722945 +
2 domain predictions
 –
LotjaGi2g1v0412900.1
n.a. 60S ribosomal L24; TAIR: AT2G36620.1 ribosomal protein L24; Swiss-Prot: sp|Q9FUL4|RL24_PRUAV 60S ribosomal protein L24; TrEMBL-Plants: tr|I3SVC9|I3SVC9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0412900 LjG1.1_chr2 90983161 90985042 +
2 domain predictions
 –
LotjaGi4g1v0419200.1
n.a. 60S ribosomal L24; TAIR: AT2G36620.1 ribosomal protein L24; Swiss-Prot: sp|Q9FUL4|RL24_PRUAV 60S ribosomal protein L24; TrEMBL-Plants: tr|I3SS30|I3SS30_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0419200 LjG1.1_chr4 79474160 79476977 -
2 domain predictions
 –
LotjaGi4g1v0419200.2
n.a. 60S ribosomal L24; TAIR: AT2G36620.1 ribosomal protein L24; Swiss-Prot: sp|Q9FUL4|RL24_PRUAV 60S ribosomal protein L24; TrEMBL-Plants: tr|I3SS30|I3SS30_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0419200 LjG1.1_chr4 79474993 79476749 -
2 domain predictions
 –