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IPR011017 is a TRASH domain.
<p>TRASH domain contains a well-conserved cysteine motif that may be involved in metal coordination. TRASH is encoded by multiple prokaryotic genomes and is present in transcriptional regulators, cation-transporting ATPases and hydrogenases, and is also present as a stand-alone module. The observed domain associations and conserved genome context of TRASH-encoding genes in prokaryotic genomes suggest that TRASH constitutes a novel component in metal trafficking and heavy-metal resistance. The precise role of the multiple copies of TRASH that are present in vertebrate proteins remains to be elucidated [[cite:PUB00014222]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine max] gi|356542711|ref|XP_003539809.1| | 14 | ||
| – | PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine max] gi|356542711|ref|XP_003539809.1| | 14 | ||
| – | PREDICTED: 60S ribosomal protein L24-like [Solanum lycopersicum] gi|460408062|ref|XP_004249467.1| | 12 | ||
| – | PREDICTED: 60S ribosomal protein L24-like [Solanum lycopersicum] gi|460408062|ref|XP_004249467.1| | 13 | ||
| – | 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0175600 | 13 | ||
| – | 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0175600 | 13 | ||
| – | 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0175600 | 13 | ||
| – | 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0175800 | 13 | ||
| – | 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0175800 | 13 | ||
| – | 60S ribosomal L24; TAIR: AT2G36620.1 ribosomal protein L24; Swiss-Prot: sp|Q9FUL4|RL24_PRUAV 60S ribosomal protein L24; TrEMBL-Plants: tr|I3SVC9|I3SVC9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0412900 | 14 | ||
| – | 60S ribosomal L24; TAIR: AT2G36620.1 ribosomal protein L24; Swiss-Prot: sp|Q9FUL4|RL24_PRUAV 60S ribosomal protein L24; TrEMBL-Plants: tr|I3SS30|I3SS30_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0419200 | 15 | ||
| – | 60S ribosomal L24; TAIR: AT2G36620.1 ribosomal protein L24; Swiss-Prot: sp|Q9FUL4|RL24_PRUAV 60S ribosomal protein L24; TrEMBL-Plants: tr|I3SS30|I3SS30_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0419200 | 15 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 8.33 |