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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR011274
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.482s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj3g3v3752070.2
n.a. PREDICTED: malate dehydrogenase, cytoplasmic-like [Cicer arietinum] gi|502155536|ref|XP_004510111.1| chr3 45341373 45347096 -
3 domain predictions
3 GO terms
Lj5g3v1201280.1
n.a. cytosolic malate dehydrogenase [Lupinus angustifolius] gi|328908589|gb|AEB60994.1| chr5 19250397 19254424 +
3 domain predictions
3 GO terms
Lj6g3v0028890.1
n.a. PREDICTED: malate dehydrogenase, cytoplasmic-like [Cicer arietinum] gi|502122643|ref|XP_004497846.1| chr6 497078 501280 +
3 domain predictions
3 GO terms
LotjaGi3g1v0554700.2
n.a. Malate dehydrogenase; TAIR: AT5G56720.1 Lactate/malate dehydrogenase family protein; Swiss-Prot: sp|Q08062|MDHC_MAIZE Malate dehydrogenase, cytoplasmic; TrEMBL-Plants: tr|G7LBJ9|G7LBJ9_MEDTR Cytoplasmic-like malate dehydrogenase; Found in the gene: LotjaGi3g1v0554700 LjG1.1_chr3 97243899 97246509 -
3 domain predictions
3 GO terms
LotjaGi5g1v0190900.1
n.a. Malate dehydrogenase; TAIR: AT5G43330.1 Lactate/malate dehydrogenase family protein; Swiss-Prot: sp|O48905|MDHC_MEDSA Malate dehydrogenase, cytoplasmic; TrEMBL-Plants: tr|F5B9G0|F5B9G0_LUPAN Malate dehydrogenase; Found in the gene: LotjaGi5g1v0190900 LjG1.1_chr5 48349411 48358100 +
3 domain predictions
3 GO terms
LotjaGi5g1v0190900.2
n.a. Malate dehydrogenase; TAIR: AT5G43330.1 Lactate/malate dehydrogenase family protein; Swiss-Prot: sp|O48905|MDHC_MEDSA Malate dehydrogenase, cytoplasmic; TrEMBL-Plants: tr|U5G3W6|U5G3W6_POPTR Malate dehydrogenase; Found in the gene: LotjaGi5g1v0190900 LjG1.1_chr5 48354812 48357774 +
3 domain predictions
3 GO terms
LotjaGi6g1v0005300.3
n.a. Malate dehydrogenase; TAIR: AT5G43330.1 Lactate/malate dehydrogenase family protein; Swiss-Prot: sp|O48905|MDHC_MEDSA Malate dehydrogenase, cytoplasmic; TrEMBL-Plants: tr|I3SCX2|I3SCX2_LOTJA Malate dehydrogenase; Found in the gene: LotjaGi6g1v0005300 LjG1.1_chr6 1052402 1055056 +
3 domain predictions
3 GO terms