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Lj6g3v0028890.1

Overview

Field Value
Gene ID Lj6g3v0028890
Transcript ID Lj6g3v0028890.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: malate dehydrogenase, cytoplasmic-like [Cicer arietinum] gi|502122643|ref|XP_004497846.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 332 332 4.00E-265
PANTHER 1 332 332 4.00E-265
PIRSF 2 330 329 2.70E-65
TIGRFAM 3 326 324 1.70E-154
SUPERFAMILY 4 154 151 7.52E-43
Gene3D 4 154 151 4.60E-51
CDD 4 328 325 0
Pfam 6 153 148 3.30E-33
TIGRFAM 7 329 323 9.10E-178
Gene3D 156 331 176 7.20E-83
ProSitePatterns 156 168 13
SUPERFAMILY 157 331 175 3.86E-64
Pfam 157 325 169 5.30E-35

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Biological process Carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
Biological process Malate metabolic process The chemical reactions and pathways involving malate, the anion of hydroxybutanedioic acid, a chiral hydroxydicarboxylic acid. The (+) enantiomer is an important intermediate in metabolism as a component of both the TCA cycle and the glyoxylate cycle.
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Molecular function Malate dehydrogenase activity Catalysis of the reversible conversion of pyruvate or oxaloacetate to malate.
Molecular function Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP.
Biological process Carboxylic acid metabolic process The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-).
Molecular function L-malate dehydrogenase activity Catalysis of the reaction: (S)-malate + NAD+ = oxaloacetate + NADH + H+.
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Expression data

Expression pattern

Expression pattern of Lj6g3v0028890.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v0028890.1, powered by CORGI.

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