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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR012093
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.824s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v3329640.1
n.a. PREDICTED: pirin-like protein-like [Glycine max] gi|356569117|ref|XP_003552752.1| chr1 37761978 37763440 +
3 domain predictions
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Lj6g3v0814380.1
n.a. PREDICTED: pirin-like protein-like [Glycine max] gi|356552737|ref|XP_003544719.1| chr6 7976468 7982942 -
3 domain predictions
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Lj6g3v0814380.2
n.a. PREDICTED: pirin-like protein-like [Glycine max] gi|356552737|ref|XP_003544719.1| chr6 7978551 7982942 -
3 domain predictions
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LotjaGi1g1v0021700.1
n.a. Pirin-like protein; TAIR: AT1G50590.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|Q9LPS9|PRNL1_ARATH Pirin-like protein At1g50590; TrEMBL-Plants: tr|A0A0B2SAS7|A0A0B2SAS7_GLYSO Pirin-like protein; Found in the gene: LotjaGi1g1v0021700 LjG1.1_chr1 2664937 2672575 -
2 domain predictions
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LotjaGi1g1v0021700.2
n.a. Pirin-like protein; TAIR: AT1G50590.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|Q9LPS9|PRNL1_ARATH Pirin-like protein At1g50590; TrEMBL-Plants: tr|A0A0B2SAS7|A0A0B2SAS7_GLYSO Pirin-like protein; Found in the gene: LotjaGi1g1v0021700 LjG1.1_chr1 2668130 2672511 -
2 domain predictions
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LotjaGi1g1v0554500.1
n.a. Pirin-like protein; TAIR: AT2G43120.2 RmlC-like cupins superfamily protein; Swiss-Prot: sp|Q9SEE4|PIRL_SOLLC Pirin-like protein; TrEMBL-Plants: tr|I1N5F6|I1N5F6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0554500 LjG1.1_chr1 108677960 108680572 +
2 domain predictions
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