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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0021700 |
Transcript ID | LotjaGi1g1v0021700.1 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Pirin-like protein; TAIR: AT1G50590.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|Q9LPS9|PRNL1_ARATH Pirin-like protein At1g50590; TrEMBL-Plants: tr|A0A0B2SAS7|A0A0B2SAS7_GLYSO Pirin-like protein; Found in the gene: LotjaGi1g1v0021700 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:2664937..2672575) extracted from Lotus japonicus Gifu genome v1.2.
GCAAACTCTTGTTTAGTTTGACCTTCCAAGAGTGAAATTCCACCTCTCCCTCTCTCTCTCTCTCATGCCACACCTCACCT TCCTATATATACTTTAAACCACCCTTCTCTTGCTACTCACATTTTCATCAAAATACAAACTACAAACTTTTTTTCCTTTC TCACCAATATTCTGCAAAATGCCAGACCAATACCTTAAAGAACCTCGTACTGTTTCCAGAAAGTTCCTGGCAAGACCTCA ACATGAAGGTGTTGGTGCTGTTGTTAGAAGAAGCATAGGAAGGTATGAGAGAATGGCCAATTTTTCTTCTTCTAGCCTTG TATATATTGATTGATCATGTTCTAACTTTTTAGAAGTGTGACATGCTAATATATTGATCATTCAATTTTGTATTGATGAT ATGTTATTGCATTGGATGGAAGTTTTGGAATTGAACTTTTGAATTGATTGGTTTATCTGGGTTTTGGTCAGATTTGAGCT CAAGTACTTCGATCCTTTCCTTGTCTTGGATGAATTCTCAGGTGGGGGAATCTCTGTTTTTTGCTCTGTTTTTCAACTTT GAATAAAAAGAAAAATGATGGTCAGTTTTATTTTGTTTTCTAACAATTAGTAATTCTGAAATGTTGCAGTGGCTGCTCCT GCTGGGTTTCCTGATCATCCACATAGAGGTTTGCCAACTGCACTTTCTGTATCATTTAGCACATGTTTGGAAATTCATTA GTTTCGATGCCAAAATAAATTACAGGAAAAACTTATGTGATTAGCTTCTGAATGACATTATTGATTCCGGAAAAAAAAGT CGCGATTCAAACACACTATTAATGCATGTTTGTTTTCATAATTTGCACAGGATACAATACACGTTTAATCATAAGTTAAG GCTTATAACTTCTAACTTGAAGTGATTCGGGCACATTTCACCTTGGAACGAAATATGTTATTACATTTGTTCTTCAGTAA TCTGAGTTTCTAACTCCATGTTCCTTCTTTTCTGATTACAGGCTTTGAGACGGTCACATACATGTTACAGGTACAGATTA TTCTTTTTCCAGTTAATTGACTAGCTCTCCCTTTCTCATTGATTATAAACTATTTAGAAACATATGATAATTGATAAACC TTTTTATAAGTTATCTCATTATTTTGTGGCAATCCTTGTAAGAAAGTCAAAGGTACAACTGAAAAATATATAATAGTTGG CCATCATAGGACTAAATAAATTAATATAATTGCAAGACTAAAATTTGATGTCAACAAAATATTTGGTTTATCTTATTTTA AGTTTATATTTTATGTTAGCTTAAAGTTACTAATTATATCGGTAATTGACTCAAATGGTATATGTTTAATTTTTGTAAGT AAGATTTCGGATTTGAATCATGTGTATGGAAAAAATTTCAACAGTAAGAATTATCTCCACAAGAATTTGGGCATTTCGAA CGATTTTCTCTATAAAACATAAATGTATTAGGGAAAAAAGCTTAAAGTTTGTTAGTTGAGCTAAATATCAGGTCAATATG GTGTTAAATCTGTGTGCTGGTGGTGTGGCAACATATAAGTCACAACTTAATGATTCTCAACCAAAATGAGCCACTATTGT ACTAGTGCCTCCAAAAGGAAATCATAAGAATGTTTTGATTGTCGATGTGAGCATAAAGACAAGAGTGACCCCACATTTTA ATGTCTTGTTCATTTCTTTCTAGAAGGCCAACTACTACCTTGAGTGTGCCTAAAGTTGTATGTGTGCTATATTGTTGGTC ACATTCACATATGTTTGTTTTTGTGCTAACCACTCATAAGTGCAATTTTTTTGTGCAATTCAGGGAGCTGTAACACATGA AGACTTTGAAGGACATAAGGGAACAATCGAAGCCGGTGACTTGCAGTGGATGACTGCAGGGAGAGGGATAGTTCACTCAG AAATGTCTGCTCCTTCTGCTCAAGGAACCCAAAAGGGTCTACAGCTCTGGATTAACCTTGCTGCCCAGCATAAAATGTAT GTGAACTATTGCATATTTGATCAGCATTGTCAAAATTGCTTTTGGATATAATTAATCATAATAAAAATGAGTTGAAAGTG ATGTGACTTATATTTATATTCATTTGCGAGGAGACCGGTTTTTATAGGACATTGTTATAGAATAAAGTTATAAACGATTG ATTAAGTCTACAGTAAAAACTACATTCTCTTACTTCTTCTTAGAATTTATTTTAAAATTAAAATTAAATTCTCTAAGTCA ATTGTTTTTTTTTTGAAAGGTAAAGGTATATAAATAGATTATCACAAAAAACCCCTAAGGACAGGACCCTCAGGGGGCGA AGATCACCCACTAATAACAAGGCACTTCGACGAACAAAAAGAAGCCCGCTAAACCGAACAGGAACTAAACGGGCAAAAAA CAAGAGCATAGGCCACAAAGAACATCCTAACTCTTTCAAAGACACAACCAGGATATACAAGCGCGACTCAAGTCTTAAAA TGATCCTCATAAACCTTCTCCAAACCACGGATAGCCTCTATGTCGCTACCCTCGAACTCTAAGTCAATTGTTAAATATGT ATATAACCACTGAAAAGTAATTATGATCCATGAAAATTAATTCTAAACCTGCCATTGTAACCAAACACATGCATACCTTA TTTCCCAACATAAAATGTGCGTGGACAAATAACATGTTTGAATTACTTTCTCTTTTTCTAGAATCAACTTTGACTCACAA AAACTATTCATAGCATGTTTATATCAATTTATCTTTCACCAAAATCAATTATGAAACTAAAAACCTACTTACTTTTTCCT AAAATTGATTCCGGTTCTCAAATAATTTAACTTTACAATCAATTGAATAATTTACAAACATTTTTCATACCTTTTCTACA AATCTTGCCCTAGTTTTTTAAGTTTAATGCGCATATCCTCTCCTCCCTAGCTTGTAAGTATCAAAATCAGGTTTGGTGGG ATACCCCCAGCTGAAATTGATCATTCTCTGTTTGCGGATGCAGCCTTTTCTTAATCAAATGAGCATTGAATCTTGCCCTA GTTGATCTTAATGTAACATTATAAAAATTTACTATTAAATCACATAAAGAGTAACCAATAGGAACTAGGAAGATTTTTTT TTTTTGGTGAAATACTCAAATCACACCTTAGCCTGACCTCACATTAGATGACGTATCTTATGCATCACTGAAGATCATCA TTAATATTTGGAGAATCGTTTTGGATAATGCACACCACCAGATATCAAGGAGGGACAAAAGGGAATTCTACTCTTTACAA AAAAAAAAGTCAAATATATTCTAAACTTTTCTGAGTTAATATATGCCTTATTGCTTTCCTCACTTTCACATGTGACTTTA TTTCATGATTCCCCATCATGTACCATTTCCTATAAGTGCTTTTGAATAGAGCACCAAAATGCAAAAGGGCCTGAAATGGC CAGCATAAAGAATGTGCCTCTCACCCTTTGAAGAGCAATATGTGCTAGTTTCAAAAATTGTCTGGTTCTCAGTGACCCTT CAATCCTTCATAAAAGGATTAAACTTTTTCAATATTAATCAGTGTCTTCTTGGAAGTACTTGTTATTCTTTGAGAAATCA TAATTATCTACCTTGAAGCTTACCTCAAGTTGGTAAAATAGTTTATCTGTGCATATTTTGTTTCCCAGTTAACAAAAAAT CCAATGCAGGTTTACTCATAAGTTAAAACTTAGTACATGTTTGATTTCACAATTTACACAGAATTCAAGACATTTACATG GACGCTAAGACTTGTAATTTCTAACTAAAAGTGATTATAAAGTATTTCAGAATCAAACAAAACATGCTATTATAGTTTTT GACCAAAATTGATTCTAAAGTATTTGATCACTGTGGAACCAAACATGCTATTAATTTGATAGTTGAACTTTGGTTTAATC TGTCTTGTACTGTTATCTCAGGATTGAACCAAGATATCAAGAAATGTTGAGCAAGGACATAGCAGAAGCTGTGAAAGATG GAATCAAGGTAAGAGTGATTGCAGGGGAAGCTCTTGGAATTAAGTCTCCAATCTACACAAGGACACCAACCATGTACTTG GACTTTACTCTTAAACCTGGTGCACACTTGCAACAACTCATACCAAAATCTTGGAATGCTTTTGTGTACATCTTAGAAGG AGAGGGTGTATTTGGAAACTCAAAATCTCAGCCTACAACACCTCACCACATTCTTCTTCTTGGTTCTGGGGATGGCCTAG AGGCATGGAACAAATCTTCTAAGGCACTAAGGTTCATTTTGGTTGGAGGTGAACCATTGGGTGAACCTGTGGTGCAATTT GGACCCTTTGTGATGAACACTCAAGAAGAGATTGACCAAACCATAGATGATTTTGAGAACTATACCAATGGATTTGAGAA AGCAAGACACTGGAAGTCTGAGAGTGCTGTTAGTCTTGATTTTTAATTTTGTTTATTTGATTTCATATTTGTTCTTTATT TTGGGAAGATGCAATGCAAGGAAAAATAAATACTCCAGTCCCTTTTTTAGTTATAAGGTACATTTGGAATCCACGAATTT GACAAATATAACAATCTATAATTAGGATGATCCTATCAATATCAACTAAACATCAGGATATGTTATTCTCTAGGTTTCAT ACTTTCTAACGGTAGACCAGAAAGACTCAATGAGAAACCTGATGATTTGGATTGTAGATGGATAATAACATGCACTTCAA TATAGAAAAAAGTGAATGAAACTCTTTGTATTAAATTTTAGCACATGATGCTGCCAAAATAATTACTGAATGATATTTGG ATAACAGGCCACATAAAATTAGAAAAACCTGGATGTATAAACTTTCAGAAAATGACACCATATTATCAGCTTAGTAAAGT AAATCGATGTCATCACATTCATTCATTTTCAGATGTTCTACAGGAGCATATAACTAGACAAGATTAAATCTTGTCAAGGA AGTTGCATAACCTTTCAGCATGAATCTGTATTTGAGAGACTAGAGTAGGAGAGGGCGCACACAAAAAGAAGAATGTATAT ATTGTTTGTGACCAAGAAGCTATATAATACAGGCACAAAATCCTCTGTCAAAAGCACTAAGCAAACCACCTTGCTAAACT TCTATTGTTTCAAGTACTTTTTCAACTTCTGAGAGGGTGGTTTTAGCTTCATCAACTTCAGGACATTCCTTCTCATCTGA CTCCTCCATTTCAGCCTGAAAGCGGAAAAGAATTACTCCACATAAAATTAAATCTACAGATCCAACTTCAAGCAAATTAA ATAAGAGAAATGCCTCAGTAAAGATATGGAGCAAAATATAAGGGGATAAATAACATTTTTTTGCATAAATGAAAATTAAT TGGTTTGTTTAAAGAACTTGCTTCACACGATTAACTGATACATGAGAACAAAAAGTTGCACAGCCAAATTATACCAAATA CCAAAATTAACATATTAAAGTAGAACATAAATGTCTCTTCTCTTTAGCTTTCACTTTCCCATTCCTTTCCCCCCCCCCCT TTCTTTCGGAAAAATGATCTAAGAAATCAAAAAAAAAATCTTGTGTTAGACCCTTAAAATGCTTCACAGTGAAATGCAGG AACTTTCAGAAATCATATTGAGAAAATGTAGCTCAGATTGGCTCAAGACGGACTACCTTGTCCCAGAGTAGAGTAAAGCT GTAAGACACTAAGTTTGCCCAAACCTTGAACTAGAGAGGTCAGGATAACCATATTCCTACCCCAATTTCTTGCTCAAAAT ACACAAGATCATTAACAGCTACTATCCTCAAATAGACCAATCAAGAGAATAATCAGCTAAGTTATTCTATGAAAAAGCCA AGGCATCAAATGGTGAGCACCTCAGAGTGGTGAAAAATGTTCATGACATGAAAACACAGCAGAAAACTGCGCTATACAGT GAACACATAAACAAGAGATATACAGTACCAATATTCCTTTCAAGTCTTCCAAAGCGACCTCCAGGCGCTTGCGGCAGTCA GGAATCATCATCCTAGACTCAGCCAGCACATTTTCCTGTTCAGATCAGGTCAAGAACACAAGTTATAACCATCATTTTAC AAAGTAAAGGAAATGACAGACAATTGTCAAACAACCCTACCATCACTTACCACAGTGATATTTCCAAATTAAAAAACGCA ATTGCAGGTGCACATAAAGCCTTACTAATAGCATGTTTGGTTCCACCGTGAAATACTTTAGATCCACTTATGGTTAGAAG CTAAAAGTCTTAGCTTATGAGTAAATGTGCCTTGGATTCTGCACAAATAATATAGTGAAAGATCCATCTTTGCATGGTTG GATTAGACAATTTTTTAGGAGAAGAGCTTATGTTTTTTCTCTTTCTCAGCAAGACTGAGTTTGCATTAGCTTTTAGTTTA TAAAATCTTTCAATTGAGAAGTATTTTATTCCTATCTTACGAAAAAGTGATGCTTATGGGGAAGTTAGATGAGGGGGCTT CTGAAAAGATGAGCAGCCGAAGCTAGACTTCCCTTTCTCTACAAATGCTTGTTGAGAAGTTCACGCAAACTCGTAGCATG TTTGAATTGGCCATGCCACAAAACGCAAATAAGGGTACCTCTAGAAGTTACACTTTGCAGCTTCTCTCTAGCAATGATTG CAAGACTTCTAACCGCAAAACCAAACACGCTACTACTCAAAGAATTTAATGACTACAAGCTAATCAAAACACAATATTCC AACGCATTAACAACTTCAATTTATAATGTGTTTCTATTAGTGGCGGAACACAATCCAAAACACAGTAACTCTAAAAGATA CACTTTAGCTTCTTCCAAAAAGTGATTATAGATCAGAATCCTCTCAATTGTAAACTCCCTCAAGTTGCAAATTTTTGTCT GTCTCTCTCTTTCGTCTTTACATGTATCAAATAGGTGAATTCTTCGAATATTTATGAAGCGAGATAAACACAACGTTACA ATTGACATTGTCAATTCCCTTGAGAGGATCCTAATCCAACAACTATTATACATCTAGTAGTAAGCACATGTTGAGCTGAG TTGAGGTATATATACCTGCTGTTTGAGATCATAAGGGTCAGCTCCTCTGTTCTTCATGTCAGCGGTTTTCGCAGCTTCGC TTTCAACTTCCTTCTCATAAGAATGCAGCTCCTTCACAATGCGTTTGCATGTGCTTGTCTTGATCTTCAGGCTTCTCACA GTAGCCATTGAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATACCCAGAAACAAGAAACGAAAAACATTAA CAATACAGAAAAAAAATATCATTTTCCAAATTCCAATCATGTAAAATTTGATTCAAGATCAAAATCAATCAAAAAAACAC GCAATGTGAAGCTGAATTCAAAATCAACGCTCAAATTGCTGAAGGAAGAGGAAAATGGTGGTGGCGATGAAGGATGATGT GAAATCTGACCTTGTGTTTGCAGAGTGCTGATCGTGCCCTAGCAACAGGTAGAAGACGATGAAGGATCAAGATTGAAAAC GACCTTGACCTTTACTCTCACTGAAACGCACCGTTTAAGGTCCCTTTTTCCTCTTTCTTTTGGGTTTTGGGCTTTTCAAA CTCTAATTTCTTTGCTTGCACAAATGGATTATCTCTATT
CDS sequence (LotjaGi1g1v0021700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCAGACCAATACCTTAAAGAACCTCGTACTGTTTCCAGAAAGTTCCTGGCAAGACCTCAACATGAAGGTGTTGGTGC TGTTGTTAGAAGAAGCATAGGAAGATTTGAGCTCAAGTACTTCGATCCTTTCCTTGTCTTGGATGAATTCTCAGTGGCTG CTCCTGCTGGGTTTCCTGATCATCCACATAGAGGCTTTGAGACGGTCACATACATGTTACAGGGAGCTGTAACACATGAA GACTTTGAAGGACATAAGGGAACAATCGAAGCCGGTGACTTGCAGTGGATGACTGCAGGGAGAGGGATAGTTCACTCAGA AATGTCTGCTCCTTCTGCTCAAGGAACCCAAAAGGGTCTACAGCTCTGGATTAACCTTGCTGCCCAGCATAAAATGATTG AACCAAGATATCAAGAAATGTTGAGCAAGGACATAGCAGAAGCTGTGAAAGATGGAATCAAGGTAAGAGTGATTGCAGGG GAAGCTCTTGGAATTAAGTCTCCAATCTACACAAGGACACCAACCATGTACTTGGACTTTACTCTTAAACCTGGTGCACA CTTGCAACAACTCATACCAAAATCTTGGAATGCTTTTGTGTACATCTTAGAAGGAGAGGGTGTATTTGGAAACTCAAAAT CTCAGCCTACAACACCTCACCACATTCTTCTTCTTGGTTCTGGGGATGGCCTAGAGGCATGGAACAAATCTTCTAAGGCA CTAAGGTTCATTTTGGTTGGAGGTGAACCATTGGGTGAACCTGTGGTGCAATTTGGACCCTTTGTGATGAACACTCAAGA AGAGATTGACCAAACCATAGATGATTTTGAGAACTATACCAATGGATTTGAGAAAGCAAGACACTGGAAGTCTGAGAGTG CTGTTAGTCTTGATTTTTAA
Protein sequence (LotjaGi1g1v0021700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPDQYLKEPRTVSRKFLARPQHEGVGAVVRRSIGRFELKYFDPFLVLDEFSVAAPAGFPDHPHRGFETVTYMLQGAVTHE DFEGHKGTIEAGDLQWMTAGRGIVHSEMSAPSAQGTQKGLQLWINLAAQHKMIEPRYQEMLSKDIAEAVKDGIKVRVIAG EALGIKSPIYTRTPTMYLDFTLKPGAHLQQLIPKSWNAFVYILEGEGVFGNSKSQPTTPHHILLLGSGDGLEAWNKSSKA LRFILVGGEPLGEPVVQFGPFVMNTQEEIDQTIDDFENYTNGFEKARHWKSESAVSLDF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 4 | 299 | 296 | 3.8E-180 | – | |
PANTHER | 4 | 299 | 296 | 3.8E-180 | – | |
PIRSF | 8 | 290 | 283 | 5.5E-99 | ||
SUPERFAMILY | 11 | 291 | 281 | 4.95E-95 | ||
Gene3D | 23 | 278 | 256 | 2.0E-105 | ||
Pfam | 29 | 124 | 96 | 5.9E-32 | ||
Gene3D | 146 | 251 | 106 | 2.0E-105 | ||
Pfam | 177 | 281 | 105 | 5.5E-34 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0021700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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