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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0021700 |
| Transcript ID | LotjaGi1g1v0021700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pirin-like protein; TAIR: AT1G50590.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|Q9LPS9|PRNL1_ARATH Pirin-like protein At1g50590; TrEMBL-Plants: tr|A0A0B2SAS7|A0A0B2SAS7_GLYSO Pirin-like protein; Found in the gene: LotjaGi1g1v0021700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:2668130..2672511) extracted from Lotus japonicus Gifu genome v1.2.
ATGCCACACCTCACCTTCCTATATATACTTTAAACCACCCTTCTCTTGCTACTCACATTTTCATCAAAATACAAACTACA AACTTTTTTTCCTTTCTCACCAATATTCTGCAAAATGCCAGACCAATACCTTAAAGAACCTCGTACTGTTTCCAGAAAGT TCCTGGCAAGACCTCAACATGAAGGTGTTGGTGCTGTTGTTAGAAGAAGCATAGGAAGGTATGAGAGAATGGCCAATTTT TCTTCTTCTAGCCTTGTATATATTGATTGATCATGTTCTAACTTTTTAGAAGTGTGACATGCTAATATATTGATCATTCA ATTTTGTATTGATGATATGTTATTGCATTGGATGGAAGTTTTGGAATTGAACTTTTGAATTGATTGGTTTATCTGGGTTT TGGTCAGATTTGAGCTCAAGTACTTCGATCCTTTCCTTGTCTTGGATGAATTCTCAGGTGGGGGAATCTCTGTTTTTTGC TCTGTTTTTCAACTTTGAATAAAAAGAAAAATGATGGTCAGTTTTATTTTGTTTTCTAACAATTAGTAATTCTGAAATGT TGCAGTGGCTGCTCCTGCTGGGTTTCCTGATCATCCACATAGAGGTTTGCCAACTGCACTTTCTGTATCATTTAGCACAT GTTTGGAAATTCATTAGTTTCGATGCCAAAATAAATTACAGGAAAAACTTATGTGATTAGCTTCTGAATGACATTATTGA TTCCGGAAAAAAAAGTCGCGATTCAAACACACTATTAATGCATGTTTGTTTTCATAATTTGCACAGGATACAATACACGT TTAATCATAAGTTAAGGCTTATAACTTCTAACTTGAAGTGATTCGGGCACATTTCACCTTGGAACGAAATATGTTATTAC ATTTGTTCTTCAGTAATCTGAGTTTCTAACTCCATGTTCCTTCTTTTCTGATTACAGGCTTTGAGACGGTCACATACATG TTACAGGTACAGATTATTCTTTTTCCAGTTAATTGACTAGCTCTCCCTTTCTCATTGATTATAAACTATTTAGAAACATA TGATAATTGATAAACCTTTTTATAAGTTATCTCATTATTTTGTGGCAATCCTTGTAAGAAAGTCAAAGGTACAACTGAAA AATATATAATAGTTGGCCATCATAGGACTAAATAAATTAATATAATTGCAAGACTAAAATTTGATGTCAACAAAATATTT GGTTTATCTTATTTTAAGTTTATATTTTATGTTAGCTTAAAGTTACTAATTATATCGGTAATTGACTCAAATGGTATATG TTTAATTTTTGTAAGTAAGATTTCGGATTTGAATCATGTGTATGGAAAAAATTTCAACAGTAAGAATTATCTCCACAAGA ATTTGGGCATTTCGAACGATTTTCTCTATAAAACATAAATGTATTAGGGAAAAAAGCTTAAAGTTTGTTAGTTGAGCTAA ATATCAGGTCAATATGGTGTTAAATCTGTGTGCTGGTGGTGTGGCAACATATAAGTCACAACTTAATGATTCTCAACCAA AATGAGCCACTATTGTACTAGTGCCTCCAAAAGGAAATCATAAGAATGTTTTGATTGTCGATGTGAGCATAAAGACAAGA GTGACCCCACATTTTAATGTCTTGTTCATTTCTTTCTAGAAGGCCAACTACTACCTTGAGTGTGCCTAAAGTTGTATGTG TGCTATATTGTTGGTCACATTCACATATGTTTGTTTTTGTGCTAACCACTCATAAGTGCAATTTTTTTGTGCAATTCAGG GAGCTGTAACACATGAAGACTTTGAAGGACATAAGGGAACAATCGAAGCCGGTGACTTGCAGTGGATGACTGCAGGGAGA GGGATAGTTCACTCAGAAATGTCTGCTCCTTCTGCTCAAGGAACCCAAAAGGGTCTACAGCTCTGGATTAACCTTGCTGC CCAGCATAAAATGTATGTGAACTATTGCATATTTGATCAGCATTGTCAAAATTGCTTTTGGATATAATTAATCATAATAA AAATGAGTTGAAAGTGATGTGACTTATATTTATATTCATTTGCGAGGAGACCGGTTTTTATAGGACATTGTTATAGAATA AAGTTATAAACGATTGATTAAGTCTACAGTAAAAACTACATTCTCTTACTTCTTCTTAGAATTTATTTTAAAATTAAAAT TAAATTCTCTAAGTCAATTGTTTTTTTTTTGAAAGGTAAAGGTATATAAATAGATTATCACAAAAAACCCCTAAGGACAG GACCCTCAGGGGGCGAAGATCACCCACTAATAACAAGGCACTTCGACGAACAAAAAGAAGCCCGCTAAACCGAACAGGAA CTAAACGGGCAAAAAACAAGAGCATAGGCCACAAAGAACATCCTAACTCTTTCAAAGACACAACCAGGATATACAAGCGC GACTCAAGTCTTAAAATGATCCTCATAAACCTTCTCCAAACCACGGATAGCCTCTATGTCGCTACCCTCGAACTCTAAGT CAATTGTTAAATATGTATATAACCACTGAAAAGTAATTATGATCCATGAAAATTAATTCTAAACCTGCCATTGTAACCAA ACACATGCATACCTTATTTCCCAACATAAAATGTGCGTGGACAAATAACATGTTTGAATTACTTTCTCTTTTTCTAGAAT CAACTTTGACTCACAAAAACTATTCATAGCATGTTTATATCAATTTATCTTTCACCAAAATCAATTATGAAACTAAAAAC CTACTTACTTTTTCCTAAAATTGATTCCGGTTCTCAAATAATTTAACTTTACAATCAATTGAATAATTTACAAACATTTT TCATACCTTTTCTACAAATCTTGCCCTAGTTTTTTAAGTTTAATGCGCATATCCTCTCCTCCCTAGCTTGTAAGTATCAA AATCAGGTTTGGTGGGATACCCCCAGCTGAAATTGATCATTCTCTGTTTGCGGATGCAGCCTTTTCTTAATCAAATGAGC ATTGAATCTTGCCCTAGTTGATCTTAATGTAACATTATAAAAATTTACTATTAAATCACATAAAGAGTAACCAATAGGAA CTAGGAAGATTTTTTTTTTTTGGTGAAATACTCAAATCACACCTTAGCCTGACCTCACATTAGATGACGTATCTTATGCA TCACTGAAGATCATCATTAATATTTGGAGAATCGTTTTGGATAATGCACACCACCAGATATCAAGGAGGGACAAAAGGGA ATTCTACTCTTTACAAAAAAAAAAGTCAAATATATTCTAAACTTTTCTGAGTTAATATATGCCTTATTGCTTTCCTCACT TTCACATGTGACTTTATTTCATGATTCCCCATCATGTACCATTTCCTATAAGTGCTTTTGAATAGAGCACCAAAATGCAA AAGGGCCTGAAATGGCCAGCATAAAGAATGTGCCTCTCACCCTTTGAAGAGCAATATGTGCTAGTTTCAAAAATTGTCTG GTTCTCAGTGACCCTTCAATCCTTCATAAAAGGATTAAACTTTTTCAATATTAATCAGTGTCTTCTTGGAAGTACTTGTT ATTCTTTGAGAAATCATAATTATCTACCTTGAAGCTTACCTCAAGTTGGTAAAATAGTTTATCTGTGCATATTTTGTTTC CCAGTTAACAAAAAATCCAATGCAGGTTTACTCATAAGTTAAAACTTAGTACATGTTTGATTTCACAATTTACACAGAAT TCAAGACATTTACATGGACGCTAAGACTTGTAATTTCTAACTAAAAGTGATTATAAAGTATTTCAGAATCAAACAAAACA TGCTATTATAGTTTTTGACCAAAATTGATTCTAAAGTATTTGATCACTGTGGAACCAAACATGCTATTAATTTGATAGTT GAACTTTGGTTTAATCTGTCTTGTACTGTTATCTCAGGATTGAACCAAGATATCAAGAAATGTTGAGCAAGGACATAGCA GAAGCTGTGAAAGATGGAATCAAGGTAAGAGTGATTGCAGGGGAAGCTCTTGGAATTAAGTCTCCAATCTACACAAGGAC ACCAACCATGTACTTGGACTTTACTCTTAAACCTGGTGCACACTTGCAACAACTCATACCAAAATCTTGGAATGCTTTTG TGTACATCTTAGAAGGAGAGGGTGTATTTGGAAACTCAAAATCTCAGCCTACAACACCTCACCACATTCTTCTTCTTGGT TCTGGGGATGGCCTAGAGGCATGGAACAAATCTTCTAAGGCACTAAGGTTCATTTTGGTTGGAGGTGAACCATTGGGTGA ACCTGTGGTGCAATTTGGACCCTTTGTGATGAACACTCAAGAAGAGATTGACCAAACCATAGATGATTTTGAGAACTATA CCAATGGATTTGAGAAAGCAAGACACTGGAAGTCTGAGAGTGCTGTTAGTCTTGATTTTTAA
CDS sequence (LotjaGi1g1v0021700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCACACCTCACCTTCCTATACCAATACCTTAAAGAACCTCGTACTGTTTCCAGAAAGTTCCTGGCAAGACCTCAACA TGAAGGTGTTGGTGCTGTTGTTAGAAGAAGCATAGGAAGATTTGAGCTCAAGTACTTCGATCCTTTCCTTGTCTTGGATG AATTCTCAGTGGCTGCTCCTGCTGGGTTTCCTGATCATCCACATAGAGGCTTTGAGACGGTCACATACATGTTACAGGGA GCTGTAACACATGAAGACTTTGAAGGACATAAGGGAACAATCGAAGCCGGTGACTTGCAGTGGATGACTGCAGGGAGAGG GATAGTTCACTCAGAAATGTCTGCTCCTTCTGCTCAAGGAACCCAAAAGGGTCTACAGCTCTGGATTAACCTTGCTGCCC AGCATAAAATGATTGAACCAAGATATCAAGAAATGTTGAGCAAGGACATAGCAGAAGCTGTGAAAGATGGAATCAAGGTA AGAGTGATTGCAGGGGAAGCTCTTGGAATTAAGTCTCCAATCTACACAAGGACACCAACCATGTACTTGGACTTTACTCT TAAACCTGGTGCACACTTGCAACAACTCATACCAAAATCTTGGAATGCTTTTGTGTACATCTTAGAAGGAGAGGGTGTAT TTGGAAACTCAAAATCTCAGCCTACAACACCTCACCACATTCTTCTTCTTGGTTCTGGGGATGGCCTAGAGGCATGGAAC AAATCTTCTAAGGCACTAAGGTTCATTTTGGTTGGAGGTGAACCATTGGGTGAACCTGTGGTGCAATTTGGACCCTTTGT GATGAACACTCAAGAAGAGATTGACCAAACCATAGATGATTTTGAGAACTATACCAATGGATTTGAGAAAGCAAGACACT GGAAGTCTGAGAGTGCTGTTAGTCTTGATTTTTAA
Protein sequence (LotjaGi1g1v0021700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPHLTFLYQYLKEPRTVSRKFLARPQHEGVGAVVRRSIGRFELKYFDPFLVLDEFSVAAPAGFPDHPHRGFETVTYMLQG AVTHEDFEGHKGTIEAGDLQWMTAGRGIVHSEMSAPSAQGTQKGLQLWINLAAQHKMIEPRYQEMLSKDIAEAVKDGIKV RVIAGEALGIKSPIYTRTPTMYLDFTLKPGAHLQQLIPKSWNAFVYILEGEGVFGNSKSQPTTPHHILLLGSGDGLEAWN KSSKALRFILVGGEPLGEPVVQFGPFVMNTQEEIDQTIDDFENYTNGFEKARHWKSESAVSLDF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 10 | 304 | 295 | 5.0E-180 | – | |
| PANTHER | 10 | 304 | 295 | 5.0E-180 | – | |
| PIRSF | 13 | 295 | 283 | 5.9E-99 | ||
| SUPERFAMILY | 16 | 296 | 281 | 5.06E-95 | ||
| Gene3D | 28 | 283 | 256 | 2.1E-105 | ||
| Pfam | 34 | 129 | 96 | 6.1E-32 | ||
| Gene3D | 151 | 256 | 106 | 2.1E-105 | ||
| Pfam | 182 | 286 | 105 | 5.7E-34 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0021700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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