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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR012394
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 18 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.019s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0274549.1
n.a. PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Glycine max] gi|356557707|ref|XP_003547154.1| chr0 142336542 142340918 -
2 domain predictions
2 GO terms
Lj0g3v0274549.2
n.a. PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Glycine max] gi|356557707|ref|XP_003547154.1| chr0 142336542 142340918 -
2 domain predictions
2 GO terms
Lj0g3v0286699.1
n.a. PREDICTED: aldehyde dehydrogenase family 3 member H1-like isoform X1 [Cicer arietinum] gi|502124011|ref|XP_004498346.1| chr0 148943375 148953155 +
2 domain predictions
2 GO terms
Lj0g3v0286699.3
n.a. PREDICTED: aldehyde dehydrogenase family 3 member H1-like isoform 1 [Glycine max] gi|356552695|ref|XP_003544698.1| chr0 148947812 148953155 +
2 domain predictions
2 GO terms
Lj0g3v0299699.1
n.a. PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Glycine max] gi|356502944|ref|XP_003520274.1| chr0 155706590 155710388 +
2 domain predictions
2 GO terms
Lj1g3v0838120.1
n.a. Aldehyde dehydrogenase family 3 member H1 [Medicago truncatula] gi|357463521|ref|XP_003602042.1| chr1 10799127 10804016 -
2 domain predictions
2 GO terms
Lj6g3v1915890.1
n.a. PREDICTED: aldehyde dehydrogenase 22A1-like [Cicer arietinum] gi|502084770|ref|XP_004487758.1| chr6 21556804 21562398 -
2 domain predictions
2 GO terms
LotjaGi1g1v0158200.1
n.a. Aldehyde dehydrogenase; TAIR: AT1G44170.1 aldehyde dehydrogenase 3H1; Swiss-Prot: sp|Q70DU8|AL3H1_ARATH Aldehyde dehydrogenase family 3 member H1; TrEMBL-Plants: tr|A0A072VFE4|A0A072VFE4_MEDTR Aldehyde dehydrogenase; Found in the gene: LotjaGi1g1v0158200 LjG1.1_chr1 29352944 29361395 -
2 domain predictions
2 GO terms
LotjaGi1g1v0158200.2
n.a. Aldehyde dehydrogenase; TAIR: AT1G44170.1 aldehyde dehydrogenase 3H1; Swiss-Prot: sp|Q70DU8|AL3H1_ARATH Aldehyde dehydrogenase family 3 member H1; TrEMBL-Plants: tr|A0A072VGG1|A0A072VGG1_MEDTR Aldehyde dehydrogenase; Found in the gene: LotjaGi1g1v0158200 LjG1.1_chr1 29352944 29363326 -
2 domain predictions
2 GO terms
LotjaGi1g1v0158200.3
n.a. Aldehyde dehydrogenase; TAIR: AT1G44170.3 aldehyde dehydrogenase 3H1; Swiss-Prot: sp|Q70DU8|AL3H1_ARATH Aldehyde dehydrogenase family 3 member H1; TrEMBL-Plants: tr|A0A072VGG1|A0A072VGG1_MEDTR Aldehyde dehydrogenase; Found in the gene: LotjaGi1g1v0158200 LjG1.1_chr1 29353443 29356404 -
2 domain predictions
2 GO terms
LotjaGi1g1v0261700.1
n.a. Aldehyde dehydrogenase; TAIR: AT1G44170.1 aldehyde dehydrogenase 3H1; Swiss-Prot: sp|Q70DU8|AL3H1_ARATH Aldehyde dehydrogenase family 3 member H1; TrEMBL-Plants: tr|G7J4Y0|G7J4Y0_MEDTR Aldehyde dehydrogenase; Found in the gene: LotjaGi1g1v0261700 LjG1.1_chr1 64092231 64097229 -
2 domain predictions
2 GO terms
LotjaGi3g1v0287200.2
n.a. Aldehyde dehydrogenase; TAIR: AT4G36250.1 aldehyde dehydrogenase 3F1; Swiss-Prot: sp|Q70E96|AL3F1_ARATH Aldehyde dehydrogenase family 3 member F1; TrEMBL-Plants: tr|A0A0B2RMN2|A0A0B2RMN2_GLYSO Aldehyde dehydrogenase; Found in the gene: LotjaGi3g1v0287200 LjG1.1_chr3 57964147 57977255 -
2 domain predictions
2 GO terms
LotjaGi3g1v0493000.1
n.a. Aldehyde dehydrogenase; TAIR: AT4G36250.1 aldehyde dehydrogenase 3F1; Swiss-Prot: sp|Q70E96|AL3F1_ARATH Aldehyde dehydrogenase family 3 member F1; TrEMBL-Plants: tr|A0A1J7I710|A0A1J7I710_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0493000 LjG1.1_chr3 91118646 91128228 +
2 domain predictions
2 GO terms
LotjaGi3g1v0493000.2
n.a. Aldehyde dehydrogenase; TAIR: AT4G36250.1 aldehyde dehydrogenase 3F1; Swiss-Prot: sp|Q70E96|AL3F1_ARATH Aldehyde dehydrogenase family 3 member F1; TrEMBL-Plants: tr|A0A1J7I710|A0A1J7I710_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0493000 LjG1.1_chr3 91118697 91123096 +
2 domain predictions
2 GO terms
LotjaGi3g1v0493000.3
n.a. Aldehyde dehydrogenase; TAIR: AT4G36250.1 aldehyde dehydrogenase 3F1; Swiss-Prot: sp|Q70E96|AL3F1_ARATH Aldehyde dehydrogenase family 3 member F1; TrEMBL-Plants: tr|A0A1J7I710|A0A1J7I710_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0493000 LjG1.1_chr3 91119654 91128334 +
2 domain predictions
2 GO terms
LotjaGi4g1v0124000.1
n.a. Aldehyde dehydrogenase; TAIR: AT4G36250.1 aldehyde dehydrogenase 3F1; Swiss-Prot: sp|Q70E96|AL3F1_ARATH Aldehyde dehydrogenase family 3 member F1; TrEMBL-Plants: tr|I1JCK5|I1JCK5_SOYBN Aldehyde dehydrogenase; Found in the gene: LotjaGi4g1v0124000 LjG1.1_chr4 17973347 17977552 -
2 domain predictions
2 GO terms
LotjaGi4g1v0412600.1
n.a. Aldehyde dehydrogenase; TAIR: AT4G34240.1 aldehyde dehydrogenase 3I1; Swiss-Prot: sp|Q8W033|AL3I1_ARATH Aldehyde dehydrogenase family 3 member I1, chloroplastic; TrEMBL-Plants: tr|A0A1J7GIQ1|A0A1J7GIQ1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0412600 LjG1.1_chr4 78841410 78846037 -
2 domain predictions
2 GO terms
LotjaGi6g1v0258400.2
n.a. Aldehyde dehydrogenase; TAIR: AT3G66658.2 aldehyde dehydrogenase 22A1; Swiss-Prot: sp|Q0WSF1|AL221_ARATH Aldehyde dehydrogenase 22A1; TrEMBL-Plants: tr|A0A1J7G6D4|A0A1J7G6D4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0258400 LjG1.1_chr6 57106445 57112634 +
2 domain predictions
2 GO terms