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LotjaGi3g1v0493000.2

Overview

Field Value
Gene ID LotjaGi3g1v0493000
Transcript ID LotjaGi3g1v0493000.2
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Aldehyde dehydrogenase; TAIR: AT4G36250.1 aldehyde dehydrogenase 3F1; Swiss-Prot: sp|Q70E96|AL3F1_ARATH Aldehyde dehydrogenase family 3 member F1; TrEMBL-Plants: tr|A0A1J7I710|A0A1J7I710_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0493000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:91118697..91123096) extracted from Lotus japonicus Gifu genome v1.2.

ATGGCAATTACAACTATGGAGTTGGAGAGAGAGTTACATAACATGAGACAGTACTATGCGAGTGGAAAGACAAAAGAAGC TTGTTGGAGAGAATCGCAGCTCAAAGGGTTACGTCGTTTCCTCATGGAGAAAGAGGAAGCTATCTTTAACGCCCTCTACC GTGATTTAGGGAAACACCGTATGGAAGCTTTTAGAGATGAGGTAAATATATTTTCTTCTCTATACCAATATATTTTGTAA GGATTAGAATTTGAGATGTTTAAGTCAGCTCTGGTACAATTATTCTCGTAGAATTTGAATTATGTCTAACACTGCCTCGA AAACAAAGTGGAATTGTTTTATAAAAAAATAGTTTTGGGACATATGAATTGGGGAGATAAATATTCAAGAATCAATACAT GAAAGAGAAATTTGGCTAATAAAAAAAACTAATGATTACCGGTGATCAAAATTTTGGAACTACTAAAGTATAATAAATAC AAGTGACATACTTGAAAAAGAATAATAAATATTTTTAGAATCTGGTAAGAAGTCTTATTTATGTCTTTAAAGAGCCTTAT AATTATGGATGAAAGAAGTATCATATTCGAGAAAGTCGTGTAAATAACTGTTTATTTTCACTTTTTACAGAATGAGCTTG TTTGTTAACTAATCACTTGTTTTTCAAAAATATTCACTTACGTATTTTTAACTGTTTATATGCTTTTAAAAAAAACTAGA ATTTTTTTTTGTCCATCAGAAAGATAAATTGCTCCCACCAGAGATTGATACCTGAATCTCCTCACCCCAATCTCATATGT CCCTTAACTAGTTAACTCCTACCACTTGAGTTATCATTCAGGGAAAAATAAATTTTGAATCATAAACATAATTATTTCTA ATAGTTTTTGGAGCAATCAATTATTTTTATCAATAAAGTGAAAATAAAACTTTATATTTTTAGACAAATATCTGTTAATT TTTACTTTTTATAAAATCACTTAATAAAATTAGTTTTATTCAACTCTAAGATCACTTACTTTTTAAGTTGAAATAAGGCC CAATATTTGAAAATGAGAATAAACATAAGGTACCGTATTTATAATTATTGATAAAAATAAAGGTATTTTAGAATACCTCA TTCTTCTCCTTTTATCTCACCCTCATACCAGAATTGAACCCTTGACATGGAAGAGTTGTTTTTTAACAACTACCATGAAG CCAACATTTCTAGTGATATTTGATTGCATGTTTTATTTTATAATACCATAAAGATCCAAGCTCACATACTGTGAGGTGTG ACTTGTGACATAGACCCACTTGTTTTTATTTGCATGTTTTATTTATAATACCATAAGATCCATGCTCATTTCTCCTGACT AGTTTCTTTTTGCTAGGCTACAACATTGGTGGAATATCACTAAACTATTCTCATATTATATAATTTCTAATTTTTCAATC CATTCACAGATAGGAACGTTAACGAAGACCTTAAATTTGGCATTGAAATGTCTGAAAGATTGGATGTCCGGCAAAAAGGT AAGAATTGTATCTACTGATTAAAATAAAAAAATATGAAATTTGCATAACTTAATCAAGACATGAGAAATCATAGATTTAT AGTGACTAATATATAAATTTGTTATGATAGGCTAAATTGCCACAGATAGCATTGCTTACCAGTGCTGAAATTGTTCCTGA GCCTCTGGGTCTTGTCCTCATAATTTCTTCTTGGAATTTCCCCTTTGGTGAGTTACATTCTACATAATTCCCATTTGATG CTTTCCAATGTGAATTTTAAAAAAAGTTGGGTATGAACAGTTTTATGGTTTTCATGTTTGAAAATTCTTCAACAATTGAT TTAAATGTTAGAATCAATTCTAGGGTGAAGTTTGCGTGAGTAGCTTCTAGCTGTCAGAACTGATTCAGGAGAAATAGAAG TTGATCCAAACATGCTAAAAGAGGTTTTTCATTGGGTTGATATATTTGCAAAATCAATTTCATCTAAATCAAGATAACAA ACCCTAAACCCTAAAGCCTCACATATTTCTTGGCTACCAACAAAATCTAGTTTATTGCTATATCTATATCATATTCTATA GCTAATTAAGGTTTCTTCATTGAGCTGATGATGAACAAACACTGATCCTCTCAATTGAAAAACAAACACAGGACTTTCCC TAGAGCCACTGATAGGAGCAGTAGCTGCTGGAAACGTAGCGGTTTTGAAGCCTTCAGAGTTATCTCCTTCATGTTCCTCT CTGCTTGCCTCTGGTCTTGCCACTTACTTGGACAATGAAGCTATTAAGGTGATTGAAGGGGGAGCAGTGGAGTCCCAGCA ACTACTACACCAAAGATGGGACAAAATCTTCTTTACAGGTCAACAGCATCAGTTTTTTTATATCTTCTTCTTCTTTCATG TTTTAACCCTTTGTAATTGTAAATTTGTAATAGCTTTTGATGATGGTTTTGTGAATGTCAAAAACTAATATCAGGAAGTG CACGTGTCGGGCGGATTGTGATGTCCGCAGCTGCGAAGCATCTGACCCCTGTCACTCTGGAGTTGGGTGGAAAATGCCCT GCAGTTGTTGATTCCCTTTCATCTTCATGGGATTTAGAGGTGTGTTGATTCATCCTTTGTTCATGTCATCACACCAATGT CTCTAAGTGTGACTAAAATGAGAGAGAAGTTTTAGTGACCCTTAAGTGGTTTGAATGGCCACAGGCATTTCAAAATAAAA GTTAAATGAATATCTTCTTATGGATTGAGTTGAAAGGCCTTTCAAATTGTGTTCAGCTTGGGTACAAATACTCACTTAGT TTATTAAGTTGATTAGTGATTTTAGTTAACAAAGTCATACTTTCTGGCAATCAAAAGGTGGCTGTGAAGCGGATTATGGT GGGGAAATATGGAACTTGTGCTGGTCAGGCATGCATAGCAGTTGACTATGTCCTTGTGGAAAACAGATACTGCTTAAAAC TGGTAACACCTCTTAAATTTTAAGCTCTCAGATTAACTGCTCTGTGTTTCTTGATATTGTATTTCATTAGGGGCTTGTGA TTGCTTTTGGTTTTTTCTTTTAGGTGGAACTGATGAAGGTCTGGATCAAGAAAATGTTTGGAGAGGTCCCACAACATTCC AACAGTATTGCAAGGATAGTGAATGAAAAACACTTCTTCAGATTGAAGAATCTTCTGACTGATCAGAAGGTCCTAAAATC AGTGGTTTATGGTGGCTCCGTGGATGAAGAAAACTTGTAACTATCACCCTTCTCTTTCACAAACTAGTTACTCGTATAAG ACTCCTGTTTCCATTATACTTATAATGTGTTGGGAGAGTTTATTTAAGATTATTTTATAGTATAAGATGGTTTGACTTTA TTTTCATTAGCTGCTCAGATGAGCTTATAAAATAAGCGTCTATACTTAGTTATAAGTTCTTTTGAGCTTACTTCAGTTTT CAAATAAACTTATGAATAAGTGCTTATTTGATAAGCGTTTGTGGCAGTAAGCTCTCAAACACGTTTACCTGAACACACTT TTAGTAGCGTATGAAGTTACTGCATTAATAGCAAGACATTTATGCCTTACTTGACTTCTTCTTTTTTACTTTGAAGAAAG GTCAGAAAATTTTGGTTTTGCAGCATTTACTGAGTTAAAGAAATCATCATATGCTCAAATTTGTGCAGATTTATTGAGCC AACGATTTTGGTGAATCCCCCACTTGATGCAGCGATCATGTCGGATGAAATTTTCGGCCCACTACTTCCAATTATTACTG TAAGATTCATGCAAATTAATGTGTCAATAAACTTTCAATAATTTTTCTATCAGCAGTGTGTAGAATAACTAACTTTCTTA GTTTGTGTGTAACCTTACATGTTCTTTTTTTCCTGTGAACAATTGCAGCTGGATAAGATTGAGGACAGTGTTAATTTTAT AAACTCAATGCCTAAACCTCTTGCCCTTTATGTTTTCACCAAAAACAAAACACTGCAGAACAGAATGATATCTGAAACAT CATCTGGCAGCTTGATGTTCAACGATTCAATGCTACAAGTAATACACTATTAAGTATTTTCTGATAATCTTTTTGCAGAT ACATGACTTGTTCCTTTTCATATACTTGACTTGGTGTGTATCTTTTCTGTGTGCAGTATGCAGCTGATACTCTACCATTT GGAGGAGTAGGTGAAAGTGGGTTTGGAATGTACCATGGAAAGTTCTCGTTTGACACATTCAGCCACCACAAGGGAATTGT GAGAAGGAGTTACCTCACAGATTTTTGGTATAGGTATCCTCCATGGACACTGAACAAGTTTCAGCTACTTGAGGTCTCGT ACAATTATGATTATCTTGGATTGCTCCTTGTCCTGCTTGGTTTAAAGAGACCATCCAAACATAAGATCATGCCTTGCTAG
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0493000.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCAATTACAACTATGGAGTTGGAGAGAGAGTTACATAACATGAGACAGTACTATGCGAGTGGAAAGACAAAAGAAGC TTGTTGGAGAGAATCGCAGCTCAAAGGGTTACGTCGTTTCCTCATGGAGAAAGAGGAAGCTATCTTTAACGCCCTCTACC GTGATTTAGGGAAACACCGTATGGAAGCTTTTAGAGATGAGATAGGAACGTTAACGAAGACCTTAAATTTGGCATTGAAA TGTCTGAAAGATTGGATGTCCGGCAAAAAGGCTAAATTGCCACAGATAGCATTGCTTACCAGTGCTGAAATTGTTCCTGA GCCTCTGGGTCTTGTCCTCATAATTTCTTCTTGGAATTTCCCCTTTGGACTTTCCCTAGAGCCACTGATAGGAGCAGTAG CTGCTGGAAACGTAGCGGTTTTGAAGCCTTCAGAGTTATCTCCTTCATGTTCCTCTCTGCTTGCCTCTGGTCTTGCCACT TACTTGGACAATGAAGCTATTAAGGTGATTGAAGGGGGAGCAGTGGAGTCCCAGCAACTACTACACCAAAGATGGGACAA AATCTTCTTTACAGGAAGTGCACGTGTCGGGCGGATTGTGATGTCCGCAGCTGCGAAGCATCTGACCCCTGTCACTCTGG AGTTGGGTGGAAAATGCCCTGCAGTTGTTGATTCCCTTTCATCTTCATGGGATTTAGAGGTGGCTGTGAAGCGGATTATG GTGGGGAAATATGGAACTTGTGCTGGTCAGGCATGCATAGCAGTTGACTATGTCCTTGTGGAAAACAGATACTGCTTAAA ACTGGTGGAACTGATGAAGGTCTGGATCAAGAAAATGTTTGGAGAGGTCCCACAACATTCCAACAGTATTGCAAGGATAG TGAATGAAAAACACTTCTTCAGATTGAAGAATCTTCTGACTGATCAGAAGGTCCTAAAATCAGTGGTTTATGGTGGCTCC GTGGATGAAGAAAACTTATTTATTGAGCCAACGATTTTGGTGAATCCCCCACTTGATGCAGCGATCATGTCGGATGAAAT TTTCGGCCCACTACTTCCAATTATTACTCTGGATAAGATTGAGGACAGTGTTAATTTTATAAACTCAATGCCTAAACCTC TTGCCCTTTATGTTTTCACCAAAAACAAAACACTGCAGAACAGAATGATATCTGAAACATCATCTGGCAGCTTGATGTTC AACGATTCAATGCTACAATATGCAGCTGATACTCTACCATTTGGAGGAGTAGGTGAAAGTGGGTTTGGAATGTACCATGG AAAGTTCTCGTTTGACACATTCAGCCACCACAAGGGAATTGTGAGAAGGAGTTACCTCACAGATTTTTGGTATAGGTATC CTCCATGGACACTGAACAAGTTTCAGCTACTTGAGGTCTCGTACAATTATGATTATCTTGGATTGCTCCTTGTCCTGCTT GGTTTAAAGAGACCATCCAAACATAAGATCATGCCTTGCTAG
Download CDS Sequence

Protein sequence (LotjaGi3g1v0493000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAITTMELERELHNMRQYYASGKTKEACWRESQLKGLRRFLMEKEEAIFNALYRDLGKHRMEAFRDEIGTLTKTLNLALK CLKDWMSGKKAKLPQIALLTSAEIVPEPLGLVLIISSWNFPFGLSLEPLIGAVAAGNVAVLKPSELSPSCSSLLASGLAT YLDNEAIKVIEGGAVESQQLLHQRWDKIFFTGSARVGRIVMSAAAKHLTPVTLELGGKCPAVVDSLSSSWDLEVAVKRIM VGKYGTCAGQACIAVDYVLVENRYCLKLVELMKVWIKKMFGEVPQHSNSIARIVNEKHFFRLKNLLTDQKVLKSVVYGGS VDEENLFIEPTILVNPPLDAAIMSDEIFGPLLPIITLDKIEDSVNFINSMPKPLALYVFTKNKTLQNRMISETSSGSLMF NDSMLQYAADTLPFGGVGESGFGMYHGKFSFDTFSHHKGIVRRSYLTDFWYRYPPWTLNKFQLLEVSYNYDYLGLLLVLL GLKRPSKHKIMPC
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PIRSF
PIRSF036492
1 476 476 4.8E-172
IPR012394
PANTHER
PTHR43570:SF24
3 489 487 2.7E-302 –
PANTHER
PTHR43570
3 489 487 2.7E-302 –
SUPERFAMILY
SSF53720
8 457 450 1.96E-104
IPR016161
Pfam
PF00171
9 438 430 4.6E-78
IPR015590
Gene3D
G3DSA:3.40.605.10
16 440 425 3.8E-155
IPR016162
Gene3D
G3DSA:3.40.309.10
217 420 204 3.8E-155
IPR016163

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006081
Biological process Cellular aldehyde metabolic process The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells.
Subterm of
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of
GO:0016620
Molecular function Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0493000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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