Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi4g1v0412600.1

Overview

Field Value
Gene ID LotjaGi4g1v0412600
Transcript ID LotjaGi4g1v0412600.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Aldehyde dehydrogenase; TAIR: AT4G34240.1 aldehyde dehydrogenase 3I1; Swiss-Prot: sp|Q8W033|AL3I1_ARATH Aldehyde dehydrogenase family 3 member I1, chloroplastic; TrEMBL-Plants: tr|A0A1J7GIQ1|A0A1J7GIQ1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0412600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:78841410..78846037) extracted from Lotus japonicus Gifu genome v1.2.

CTTCGATCATTTTAATGGCTGTGATTGAACTACTGTCAGTGTTGTTGAGTTGCTATTCACGAAAGAGGTCCATGCATACA ACGGTCACGATTTACCAGACCCACGTGGGTTCATGTCACATTCTTCATCCTACTCACTATTTGATCTAAGTAAAACGTTT CTCGAATTTTTGGATGTGTCCTCGTGCAATTTTAGTACATGGGGTCAATGCAACTTCATTAAATAAATGTGTGTTATCCT TAACTTGTGTTTTTCATGGCTGAGAACTCATTCGGTTCTGTTATATATACACCTGAACTTGCAAGTTACACAAATCAAAT TTATGATCCCTTCTCTTACCCAATTACCAAAGCATTTTCCTCTTCTTGTTTTACCATGAAAAGCCTCTGTCTTGGCCCGT TTCTTGCAGCCAGGTACATCTTTTCCAACTCTTCCTTGTTTACTACTACTTTGTTATTCATAAAATCAAATTCTAACATA TGAAAGAAAGATTATCAATAAGAATAATCACCCTCAATTAACTAAGATTTCATCATAGTTGGAAAACCTCTTACTTCAGT TCTTCATATTGAGAAACAGCACCCCAATTGGAAGCAGAGCTTTTGCATACAATTTGAACAGAAAGTGCTTTCGCAAGCAA CTTCAGTTCCACTCCAGCTGTGTTGTTTTATCTTCATTCTCGTAAACTCTGTCCCTCCCTCTCTCTCTCTCTCAACCCTG CACATTTTGTTCATATATGGTGTTTTAATTGTAGTTTTGCTCAACTATGTTGTTTTTTTCTATGTGGTTTGTTTGCATGC ATATGGTTTATCTTGGGAAGATGTTCTGCAACCGTATCCGTTGCTCCAGAATTAGAATTAGAAGAGAAGAAAACATTTGA TGGGGAGAAGGCTGCTTTACTTGTTAGAGAGCTGAGAAAGAGCTTTGATTCAGGCAGGACAAAGAGCTATGAATGGAGGA TTTCCCAGTTGGAGGGAATAGCTAAGATGCTAGAGGAGAAGGAGGAGGAAATTATTAAAGCTCTTGATAAGGATCTATCC AAACCTGGATTCGAATCATTTATTACTGAGGTCTTATATTTCCCATTTTATTTCTATCATTTCCCTTTTTTCATGATGGT TTTTAGTATATCCATTTGCCTTGTTACCATCATGGTTACCATCAAATTTACTATGTGTGCACTTTTTTGTTGCAGATTTC CCAGGCAAAATCCTCATGTAGTGAAGCACTTGAAGAACTGAAACACTGGATGAAGCCTGAAAAGGTAATTACTAAGAATA AGAAATGACATTTAGCATGTTTGGATCAACTTATTTTTGTTCAGAATCAGTTCTGGCACTCAAAAGCTACTCATAAAAGC TTATTTCCAGAATTATTTATGGCTTTAGAATCAATTTGTAGAATGATTTCCAAACCTGCTATTAGAGTTATTAATTAACA CAAGTTTTCTGTCCCTCTCTTTTAGGTGAAAACTTCAATCACAACATTTCCATCATCAGCCGAGATTGTATCAGAACCGC TAGGAGTTGTGTTGGTTGTCTCAACATGGAACTTTCCTTTGTGTATGTCTCTTTTCATATCAGAACAGCATTTGGTTACA ATGCAAAACAGCTTTTCTTTAGTCTAGTGTAGTGGGATTAGACTCTTTAAATACAATACAAGCCCTTATGCAACTTTATT TAGTCGAAATACAATTTCATTATTTAATTTAAGCCTCAAATGCCACAAATCTGTATTCACCCTTAGTTAATTATATCTCT TTTAAAATTCTGTCTGTTCTCTGTATATAAAGTTGACCACAGGTTTCAGGTCACTTGCCAAAACCACCAACAGATTAGAG CTATGTTTATTATACTTTTGCATCTTCATAAAATTTTGCTTTTCATAACTTTTCACTATGTAATGAGTTCTCAACATCCA TACCATTTTGTTACTTTTTGGAATGCTTGCACCATCTAATTTATTGATTTTTTCATCTTCTCCACCATTTCCCTTTTCCA TTGATTAATATGGTCTTATTTCCTATCTTCAGTGTTATCATTGGACCCTGTCATTGGAGCCATTTCAGCAGGTAATGCAG TGGTCCTAAAACCATCAGAAATTGCTCCAGCAACGTCATCAGTGCTTGCGGATTTTCTCAAAAGTTATCTTGACAACTCT GCCATAAGAGTTGTAGAAGGAGCTATTCCTGAAACAACTGCACTCCTGGAGCAGAAGTGGGATAAGATACTTTACACAGG TAATTTTTCTTCTAATATCATATCGATATCCTCCAAAATCACACCATATCAAACAGTTTCATCAGTCTCTGAGACAGTAT AAAACTTGAAAATTTAAAATACTAGTGTTAATTTTATCAATGTCACGATTGTTGTATTTCCCTCTTTCTGAAGGTGTTTG TTTCTTTTGAGACTTTTGGATAGCACGAGTGCATCATGAACAGACTTCCATCCCAATCTATAAAAATAGTTTCATTCACC TTTTTTCCTTGAGGTGTGTGCTAAGATCCGCTTGTACTAGGCCAACGGATATCTAAACATTTCATTGATAAATGATAATA ATCCGCAGTTTGAAATTTCGCTCTATTTTAAGCTGTTTCTGTGTTTCATACAAATGTCTAAATCTAGTAATTACTTATTA CAACTTGGATCAAGAAATTTGAGTTGACATGATACATTTGATGATTTTGATTTATAACAAAGTTGTGCTTACTTAGCCTA ATTAGCATGCCACCTCCACCAGAAGTTTCCAAGCATAATAGACCAATTTCTTGCAGGCAGTGCTAGAGTAGGTCGCATTG TCATGGCTGCTGCAGCAAAGCATCTTACGCCAGTGGTTCTGGAACTTGGAGGAAAGTGCCCAGCTGTTGTTGATTCAGAT GTCAACTTACAAGTAACATCATTTGTTGAATTCGTTACTTATGCATCTGAGATTCTGAGTAGCATATTTTCATGTATAAT AACCCTTGAAATCTCAGGTTACTGCTAGGAGGATAATAGCTGGAAAATGGGCATGCAATAGTGGACAAGCATGCATTTCT GTTGATTATATCATCACCAAAAAAGAATTTGCTCCTGCGCTGGTAAGATTGCCCTTATAATACAAATTTCAGCATGCTAT TAAAATGTCTCTTGATAAATTGTTAATGGGCAGATAAATGCTTTAAAAGAAGAATTGGAGCAATGTTTTGGGAAAGATCC GATTGAATCAAAAGACATGTCACGTATTGTGTCTCCAGCTCAATTTACACGACTTGCGAAGCTCTTGGATGAGGTATCTG ACAAAATTGCTCTAGGAGGTCAGAGTGATGAGAAGAAATTGTGAGTTGTATTCCCATCTTGGTTCTTAAGATTGAAATTA TTTGTAACAATATCATAACTTCAATTCTCTCTCTATGTTGCAGAAAGATTGCTCCAACTATCGTATTGGATGTTCCACAA GAAGCTATGATAATGCAAGAGGAGATATTTGGGCCAATAATGCCGATCATCACTGTGAGTACATATGGGACTTGTTGACA AGGAGATAACTCTTCTTGATGCAGGGAAAACATGTTCAAAACTTATATGTTTTTATATGTTTTTATACTTCACATAGAAG TTAGGTTCTTATATCCTTTCCTCATATATTTTTGCAGGTGGACAAGATAGAAGATTGCTTCAGTATAATCAAATCAAAGC CAAAGCCTCTCGCTGCATATCTCTTCACAAACAATGAACAGCTGAAGAAGGACTATGTTGAAAAGATATCTTCTGGAGGG ATGCTCATCAATGACACTATTATGCATGTAATTATTCTCTCACTGAAATTTATACATGAAAAATCATCATCTGCTAACAC ACACACACACACATATTATAAATTTTGCCTAGCTATGATCCTATTTTCATAAATTTTGCTCTCTATTAATAGTGCTCAAT CAGTAGAACAAAAATTTTGCTCTCTATTTTCATATTCATCAAAGTTGAAATCAATACTTGTACACACACACATATGAAGA TACTTAAGCTAGTTTCACATTGATGCAGGTTGCAACTCGTGGATTGCCTTTTGGAGGAGTTGAAGAGAGTGGAATGGGTT CTTACCATGGAAAATTCTCTTTTGATAGTTTCAGCCATAAAAAGTCAGTTCTTTATAGAAGTTTTGATGCAGATTCATCC CTTAGGTACCCTCCATATACACCTCAGAAGCAAAAATTGTTGAAGGCCATTATCAGTCGCGACATTTTTGCCATCTTTCT TGCTTTGTTTGGAAGCTCTAAAGAATGAATGATGCGTAAGGGACATGTTATATGTTCTTGTTCTCCCCTGTCTATAAATG TTCTGTTCATTTTTAGATATGTATTGACGTGCTATTTAAAAAAATGTTCACAAATAAGGAAATATTTAAACTTTGTCCTA GGCCAGTAACATTAATAATACTGATGCTCCTCTTCCTTATAAATCTCCTCAAGTCTATGAGCAAATCCTATGCCACTTAT ATATTTATGTCAATTTTGTATTTCTTACACATTGTGTGTGTGTATATTCAAAAGTTTTAGTTATATCTATACCTCTTTAT ATTGTCACTGATCGTTACTAGACTTCTATGATTGTGGATTTGTGGTCTAGAATTCATTTTAATTTTAC
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0412600.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCTAGAGGAGAAGGAGGAGGAAATTATTAAAGCTCTTGATAAGGATCTATCCAAACCTGGATTCGAATCATTTATTAC TGAGATTTCCCAGGCAAAATCCTCATGTAGTGAAGCACTTGAAGAACTGAAACACTGGATGAAGCCTGAAAAGGTGAAAA CTTCAATCACAACATTTCCATCATCAGCCGAGATTGTATCAGAACCGCTAGGAGTTGTGTTGGTTGTCTCAACATGGAAC TTTCCTTTGTTGTTATCATTGGACCCTGTCATTGGAGCCATTTCAGCAGGTAATGCAGTGGTCCTAAAACCATCAGAAAT TGCTCCAGCAACGTCATCAGTGCTTGCGGATTTTCTCAAAAGTTATCTTGACAACTCTGCCATAAGAGTTGTAGAAGGAG CTATTCCTGAAACAACTGCACTCCTGGAGCAGAAGTGGGATAAGATACTTTACACAGGCAGTGCTAGAGTAGGTCGCATT GTCATGGCTGCTGCAGCAAAGCATCTTACGCCAGTGGTTCTGGAACTTGGAGGAAAGTGCCCAGCTGTTGTTGATTCAGA TGTCAACTTACAAGTTACTGCTAGGAGGATAATAGCTGGAAAATGGGCATGCAATAGTGGACAAGCATGCATTTCTGTTG ATTATATCATCACCAAAAAAGAATTTGCTCCTGCGCTGATAAATGCTTTAAAAGAAGAATTGGAGCAATGTTTTGGGAAA GATCCGATTGAATCAAAAGACATGTCACGTATTGTGTCTCCAGCTCAATTTACACGACTTGCGAAGCTCTTGGATGAGGT ATCTGACAAAATTGCTCTAGGAGGTCAGAGTGATGAGAAGAAATTAAAGATTGCTCCAACTATCGTATTGGATGTTCCAC AAGAAGCTATGATAATGCAAGAGGAGATATTTGGGCCAATAATGCCGATCATCACTGTGGACAAGATAGAAGATTGCTTC AGTATAATCAAATCAAAGCCAAAGCCTCTCGCTGCATATCTCTTCACAAACAATGAACAGCTGAAGAAGGACTATGTTGA AAAGATATCTTCTGGAGGGATGCTCATCAATGACACTATTATGCATGTTGCAACTCGTGGATTGCCTTTTGGAGGAGTTG AAGAGAGTGGAATGGGTTCTTACCATGGAAAATTCTCTTTTGATAGTTTCAGCCATAAAAAGTCAGTTCTTTATAGAAGT TTTGATGCAGATTCATCCCTTAGGTACCCTCCATATACACCTCAGAAGCAAAAATTGTTGAAGGCCATTATCAGTCGCGA CATTTTTGCCATCTTTCTTGCTTTGTTTGGAAGCTCTAAAGAATGA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0412600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLEEKEEEIIKALDKDLSKPGFESFITEISQAKSSCSEALEELKHWMKPEKVKTSITTFPSSAEIVSEPLGVVLVVSTWN FPLLLSLDPVIGAISAGNAVVLKPSEIAPATSSVLADFLKSYLDNSAIRVVEGAIPETTALLEQKWDKILYTGSARVGRI VMAAAAKHLTPVVLELGGKCPAVVDSDVNLQVTARRIIAGKWACNSGQACISVDYIITKKEFAPALINALKEELEQCFGK DPIESKDMSRIVSPAQFTRLAKLLDEVSDKIALGGQSDEKKLKIAPTIVLDVPQEAMIMQEEIFGPIMPIITVDKIEDCF SIIKSKPKPLAAYLFTNNEQLKKDYVEKISSGGMLINDTIMHVATRGLPFGGVEESGMGSYHGKFSFDSFSHKKSVLYRS FDADSSLRYPPYTPQKQKLLKAIISRDIFAIFLALFGSSKE
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR43570:SF25
1 440 440 5.8E-268 –
PANTHER
PTHR43570
1 440 440 5.8E-268 –
PIRSF
PIRSF036492
1 437 437 1.9E-174
IPR012394
Pfam
PF00171
1 396 396 4.5E-81
IPR015590
Gene3D
G3DSA:3.40.605.10
1 396 396 1.9E-159
IPR016162
SUPERFAMILY
SSF53720
2 412 411 4.84E-107
IPR016161
Gene3D
G3DSA:3.40.309.10
178 376 199 1.9E-159
IPR016163

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006081
Biological process Cellular aldehyde metabolic process The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells.
Subterm of
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of
GO:0016620
Molecular function Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0412600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…