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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013178
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.499s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0216379.1
n.a. Histone acetyltransferase [Medicago truncatula] gi|357466361|ref|XP_003603465.1| chr0 109876577 109879921 +
3 domain predictions
3 GO terms
Lj0g3v0270249.1
n.a. PREDICTED: LOW QUALITY PROTEIN: histone acetyltransferase HAC1-like [Cicer arietinum] gi|502089455|ref|XP_004488916.1| chr0 140011975 140025960 +
3 domain predictions
3 GO terms
LotjaGi3g1v0338000.1
n.a. Histone acetyltransferase; TAIR: AT1G16710.10 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12; TrEMBL-Plants: tr|I1KG14|I1KG14_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000 LjG1.1_chr3 71042862 71056878 +
3 domain predictions
3 GO terms
LotjaGi3g1v0338000.2
n.a. Histone acetyltransferase; TAIR: AT1G16710.10 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12; TrEMBL-Plants: tr|I1KG14|I1KG14_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000 LjG1.1_chr3 71043049 71057558 +
3 domain predictions
3 GO terms
LotjaGi3g1v0338000.3
n.a. Histone acetyltransferase; TAIR: AT1G16710.10 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12; TrEMBL-Plants: tr|I1KG14|I1KG14_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000 LjG1.1_chr3 71043055 71056890 +
3 domain predictions
3 GO terms
LotjaGi3g1v0338000.4
n.a. Histone acetyltransferase; TAIR: AT1G16710.4 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9C5X9|HAC1_ARATH Histone acetyltransferase HAC1; TrEMBL-Plants: tr|K7KYS1|K7KYS1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000 LjG1.1_chr3 71043838 71056349 +
3 domain predictions
3 GO terms
LotjaGi3g1v0338000.5
n.a. Histone acetyltransferase; TAIR: AT1G16710.10 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12; TrEMBL-Plants: tr|I1KG14|I1KG14_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000 LjG1.1_chr3 71043838 71056349 +
3 domain predictions
3 GO terms
LotjaGi5g1v0201900_LC.1
n.a. Histone acetyltransferase; TAIR: AT1G16710.9 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12; TrEMBL-Plants: tr|A0A151RA54|A0A151RA54_CAJCA Histone acetyltransferase HAC12; Found in the gene: LotjaGi5g1v0201900_LC LjG1.1_chr5 50184585 50185212 -
3 domain predictions
3 GO terms
LotjaGi5g1v0202100.1
n.a. Histone acetyltransferase; TAIR: AT1G79000.2 histone acetyltransferase of the CBP family 1; Swiss-Prot: sp|Q9C5X9|HAC1_ARATH Histone acetyltransferase HAC1; TrEMBL-Plants: tr|G7J5R6|G7J5R6_MEDTR Histone acetylation protein; Found in the gene: LotjaGi5g1v0202100 LjG1.1_chr5 50210083 50231146 -
3 domain predictions
3 GO terms