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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013272
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.021s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0072839.1
n.a. INO80 complex subunit C [Medicago truncatula] gi|357462405|ref|XP_003601484.1| chr0 27144199 27147799 +
3 domain predictions
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Lj4g3v0166330.1
n.a. PREDICTED: vacuolar protein sorting-associated protein 72 homolog [Cicer arietinum] gi|502141750|ref|XP_004504620.1| chr4 2074503 2080097 +
3 domain predictions
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LotjaGi4g1v0017200.1
n.a. Vacuolar protein sorting-associated protein 72 like; TAIR: AT2G36740.1 DNA binding protein SWC2; Swiss-Prot: sp|F4IP06|SWC2_ARATH SWR1 complex subunit 2; TrEMBL-Plants: tr|A0A1J7IHB7|A0A1J7IHB7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0017200 LjG1.1_chr4 2197385 2204012 +
3 domain predictions
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LotjaGi6g1v0026800.1
n.a. INO80 complex subunit C; TAIR: AT4G38495.1 chromatin-remodeling complex subunit; Swiss-Prot: sp|Q8BHA0|IN80C_MOUSE INO80 complex subunit C; TrEMBL-Plants: tr|I3SJK2|I3SJK2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0026800 LjG1.1_chr6 4719579 4723410 +
3 domain predictions
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LotjaGi6g1v0026800.2
n.a. INO80 complex subunit C; TAIR: AT4G38495.1 chromatin-remodeling complex subunit; Swiss-Prot: sp|Q8BHA0|IN80C_MOUSE INO80 complex subunit C; TrEMBL-Plants: tr|I3SJK2|I3SJK2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0026800 LjG1.1_chr6 4720291 4723165 +
3 domain predictions
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